Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1525

Experiment: DMSO

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO
1,714,305	+		Psyr_1524	0.43	-0.9
1,714,305	+		Psyr_1524	0.43	+0.2
1,714,305	+		Psyr_1524	0.43	+1.9
1,714,305	+		Psyr_1524	0.43	+1.2
1,714,306	-		Psyr_1524	0.43	+0.3
1,714,306	-		Psyr_1524	0.43	-0.0
1,714,306	-		Psyr_1524	0.43	-0.0
1,714,306	-		Psyr_1524	0.43	-1.0
1,714,306	-		Psyr_1524	0.43	+0.1
1,714,306	-		Psyr_1524	0.43	-0.8
1,714,306	-		Psyr_1524	0.43	-0.3
1,714,306	-		Psyr_1524	0.43	+0.1
1,714,306	-		Psyr_1524	0.43	-1.8
1,714,431	+		Psyr_1524	0.59	+0.1
1,714,432	-		Psyr_1524	0.59	+0.6
1,714,432	-		Psyr_1524	0.59	-0.4
1,714,444	-		Psyr_1524	0.61	-0.7
1,714,444	-		Psyr_1524	0.61	-0.1
1,714,444	-		Psyr_1524	0.61	-1.2
1,714,472	+		Psyr_1524	0.64	+0.4
1,714,496	+		Psyr_1524	0.67	-1.4
1,714,536	+		Psyr_1524	0.72	+0.7
1,714,536	+		Psyr_1524	0.72	-0.4
1,714,536	+		Psyr_1524	0.72	+0.3
1,714,536	+		Psyr_1524	0.72	+0.4
1,714,536	+		Psyr_1524	0.72	-0.3
1,714,536	+		Psyr_1524	0.72	+0.3
1,714,536	+		Psyr_1524	0.72	+0.4
1,714,536	+		Psyr_1524	0.72	+1.5
1,714,536	+		Psyr_1524	0.72	+0.4
1,714,537	-		Psyr_1524	0.72	+1.6
1,714,537	-		Psyr_1524	0.72	-0.8
1,714,537	-		Psyr_1524	0.72	-0.4
1,714,537	-		Psyr_1524	0.72	+0.5
1,714,537	-		Psyr_1524	0.72	+1.2
1,714,538	+		Psyr_1524	0.73	-1.3
1,714,768	-				-0.4
1,714,768	-				-0.3
1,714,769	+				-0.5
1,714,769	+				-1.2
1,714,769	+				-0.5
1,714,770	-				-0.2
1,714,770	-				+0.2
1,714,770	-				+1.0
1,714,809	+				-1.2
1,714,810	-				+0.7
1,714,810	-				-0.0
1,714,812	-				-2.4
1,714,812	-				+1.7
1,714,871	-				-1.2
1,715,029	-				-0.5
1,715,029	-				+0.1
1,715,420	+		Psyr_1525	0.14	-2.4
1,715,421	-		Psyr_1525	0.14	+0.5
1,715,607	-		Psyr_1525	0.28	+0.5
1,715,628	+		Psyr_1525	0.29	-0.4
1,715,628	+		Psyr_1525	0.29	+0.9
1,715,628	+		Psyr_1525	0.29	+0.3
1,715,628	+		Psyr_1525	0.29	+1.0
1,715,629	-		Psyr_1525	0.30	-1.0
1,715,629	-		Psyr_1525	0.30	-2.8
1,715,672	+		Psyr_1525	0.33	-0.1
1,715,673	-		Psyr_1525	0.33	+0.7
1,715,676	+		Psyr_1525	0.33	+0.3
1,715,676	+		Psyr_1525	0.33	+0.1
1,715,676	+		Psyr_1525	0.33	-0.4
1,715,676	+		Psyr_1525	0.33	+1.5
1,715,676	+		Psyr_1525	0.33	+0.0
1,715,677	-		Psyr_1525	0.33	+1.5
1,715,677	-		Psyr_1525	0.33	+0.7
1,715,677	-		Psyr_1525	0.33	+2.7
1,715,684	+		Psyr_1525	0.34	-0.1
1,715,684	+		Psyr_1525	0.34	-0.7
1,715,684	+		Psyr_1525	0.34	+1.0
1,715,685	-		Psyr_1525	0.34	+2.3
1,715,685	-		Psyr_1525	0.34	-1.2
1,715,685	-		Psyr_1525	0.34	+0.7
1,715,685	-		Psyr_1525	0.34	+0.4
1,715,685	-		Psyr_1525	0.34	-0.7
1,715,697	-		Psyr_1525	0.34	+0.5
1,715,697	-		Psyr_1525	0.34	+0.7
1,715,697	-		Psyr_1525	0.34	-0.3
1,715,697	-		Psyr_1525	0.34	+0.3
1,715,698	+		Psyr_1525	0.35	+0.9
1,715,698	+		Psyr_1525	0.35	+0.7
1,715,698	+		Psyr_1525	0.35	+0.3
1,715,698	+		Psyr_1525	0.35	+0.2
1,715,699	-		Psyr_1525	0.35	+0.2
1,715,699	-		Psyr_1525	0.35	+0.2
1,715,699	-		Psyr_1525	0.35	+0.6
1,715,699	-		Psyr_1525	0.35	+0.1
1,715,699	-		Psyr_1525	0.35	-0.3
1,715,702	+		Psyr_1525	0.35	+0.7
1,715,702	+		Psyr_1525	0.35	-0.3
1,715,702	+		Psyr_1525	0.35	-0.4
1,715,702	+				+0.7
1,715,702	+		Psyr_1525	0.35	+0.0
1,715,702	+		Psyr_1525	0.35	+1.6
1,715,702	+		Psyr_1525	0.35	+0.3
1,715,702	+		Psyr_1525	0.35	+1.0
1,715,702	+		Psyr_1525	0.35	-0.7
1,715,702	+		Psyr_1525	0.35	-0.6
1,715,702	+		Psyr_1525	0.35	+0.8
1,715,703	-		Psyr_1525	0.35	-1.2
1,715,703	-		Psyr_1525	0.35	-0.1
1,715,703	-		Psyr_1525	0.35	+0.5
1,715,705	+		Psyr_1525	0.35	+0.4
1,715,705	+		Psyr_1525	0.35	-0.6
1,715,705	+		Psyr_1525	0.35	-0.4
1,715,705	+		Psyr_1525	0.35	+0.1
1,715,705	+		Psyr_1525	0.35	+0.8
1,715,705	+		Psyr_1525	0.35	+0.2
1,715,705	+		Psyr_1525	0.35	+1.0
1,715,705	+		Psyr_1525	0.35	-1.0
1,715,705	+		Psyr_1525	0.35	+2.5
1,715,706	-		Psyr_1525	0.35	-0.6
1,715,706	-		Psyr_1525	0.35	-0.1
1,715,706	-		Psyr_1525	0.35	+0.2
1,715,706	-		Psyr_1525	0.35	+1.1
1,715,706	-		Psyr_1525	0.35	+0.8
1,715,706	-		Psyr_1525	0.35	-0.3
1,715,706	-		Psyr_1525	0.35	+0.5
1,715,706	-		Psyr_1525	0.35	-0.6
1,715,706	-		Psyr_1525	0.35	+0.2
1,715,707	+		Psyr_1525	0.35	-0.8
1,715,707	+		Psyr_1525	0.35	+2.0
1,715,708	-		Psyr_1525	0.35	-0.6
1,715,805	-		Psyr_1525	0.42	-0.5
1,715,805	-		Psyr_1525	0.42	+0.1
1,715,933	+		Psyr_1525	0.52	+0.8
1,715,933	+		Psyr_1525	0.52	+0.5
1,715,966	+		Psyr_1525	0.54	+1.5
1,715,966	+		Psyr_1525	0.54	+1.2
1,715,966	+		Psyr_1525	0.54	-0.8
1,715,967	-		Psyr_1525	0.54	+0.4
1,715,967	-		Psyr_1525	0.54	-0.8
1,715,967	-		Psyr_1525	0.54	+0.2
1,715,967	-		Psyr_1525	0.54	-0.9
1,716,035	+		Psyr_1525	0.59	+0.2
1,716,035	+		Psyr_1525	0.59	-0.1
1,716,035	+		Psyr_1525	0.59	+0.2
1,716,035	+		Psyr_1525	0.59	+1.6
1,716,035	+		Psyr_1525	0.59	+0.1
1,716,035	+		Psyr_1525	0.59	-1.6
1,716,035	+		Psyr_1525	0.59	+0.4
1,716,035	+		Psyr_1525	0.59	+0.2
1,716,035	+		Psyr_1525	0.59	-0.2
1,716,036	-		Psyr_1525	0.59	+0.5
1,716,036	-		Psyr_1525	0.59	+2.2
1,716,036	-		Psyr_1525	0.59	-0.1
1,716,036	-		Psyr_1525	0.59	+0.6
1,716,036	-		Psyr_1525	0.59	-0.3
1,716,036	-		Psyr_1525	0.59	-0.9
1,716,036	-		Psyr_1525	0.59	+0.6
1,716,060	+		Psyr_1525	0.61	-0.6
1,716,060	+		Psyr_1525	0.61	-0.1
1,716,060	+		Psyr_1525	0.61	-0.5
1,716,061	-		Psyr_1525	0.61	+1.2
1,716,061	-		Psyr_1525	0.61	+0.2
1,716,073	+		Psyr_1525	0.62	+0.6
1,716,073	+		Psyr_1525	0.62	+0.0
1,716,074	-		Psyr_1525	0.62	-1.1
1,716,130	+		Psyr_1525	0.66	+0.4
1,716,130	+		Psyr_1525	0.66	+0.2
1,716,130	+		Psyr_1525	0.66	+0.3
1,716,130	+		Psyr_1525	0.66	-0.7
1,716,130	+		Psyr_1525	0.66	-0.3
1,716,131	-		Psyr_1525	0.66	-0.4
1,716,131	-		Psyr_1525	0.66	+1.3
1,716,168	+		Psyr_1525	0.69	-0.1
1,716,168	+		Psyr_1525	0.69	-0.2
1,716,169	-		Psyr_1525	0.69	+1.1
1,716,186	-		Psyr_1525	0.70	-0.2
1,716,225	+		Psyr_1525	0.73	+1.3
1,716,225	+		Psyr_1525	0.73	-0.0
1,716,225	+		Psyr_1525	0.73	+1.0
1,716,269	-		Psyr_1525	0.76	-0.4
1,716,286	+		Psyr_1525	0.77	+0.6
1,716,286	+		Psyr_1525	0.77	-0.5
1,716,287	-		Psyr_1525	0.77	+0.4
1,716,320	+		Psyr_1525	0.80	+0.2
1,716,320	+				-0.4
1,716,320	+		Psyr_1525	0.80	-1.1
1,716,321	-		Psyr_1525	0.80	-0.1
1,716,321	-		Psyr_1525	0.80	+0.3
1,716,447	-		Psyr_1525	0.89	+0.2
1,716,471	-				-0.8
1,716,471	-				-0.3
1,716,471	-				-0.4
1,716,473	+				-0.7
1,716,474	-				-0.9
1,716,474	-				+0.5
1,716,474	-				+0.6
1,716,507	+				+1.3
1,716,507	+				-2.5
1,716,507	+				+0.9
1,716,508	-				+1.2
1,716,508	-				+0.7
1,716,508	-				-0.1
1,716,508	-				+0.2
1,716,508	-				+0.4
1,716,554	+				-3.2
1,716,555	-				+0.6
1,716,611	+				-0.4
1,716,611	+				-1.3
1,716,611	+				+0.7
1,716,611	+				+0.4
1,716,612	-				-0.1
1,716,612	-				+0.5
1,716,612	-				+0.4
1,716,718	+		Psyr_1526	0.17	-0.3
1,716,718	+		Psyr_1526	0.17	+0.1
1,716,740	+		Psyr_1526	0.20	+0.6
1,716,740	+		Psyr_1526	0.20	-0.4
1,716,741	-		Psyr_1526	0.20	-0.4
1,716,741	-		Psyr_1526	0.20	-0.0
1,716,836	+		Psyr_1526	0.33	-0.3
1,716,836	+		Psyr_1526	0.33	-1.0
1,716,836	+		Psyr_1526	0.33	-0.1
1,716,836	+		Psyr_1526	0.33	-0.8
1,716,837	-		Psyr_1526	0.33	+0.3
1,716,886	+		Psyr_1526	0.40	-0.9
1,716,900	+		Psyr_1526	0.42	+2.5
1,716,900	+		Psyr_1526	0.42	+0.5
1,716,900	+		Psyr_1526	0.42	+0.8
1,716,901	-		Psyr_1526	0.42	+1.6
1,716,901	-		Psyr_1526	0.42	-1.2
1,716,901	-		Psyr_1526	0.42	+0.8
1,716,901	-		Psyr_1526	0.42	-0.5
1,716,901	-		Psyr_1526	0.42	+0.5
1,716,901	-		Psyr_1526	0.42	+1.1
1,716,901	-		Psyr_1526	0.42	-2.6
1,716,901	-		Psyr_1526	0.42	+0.6
1,716,901	-		Psyr_1526	0.42	-1.4
1,716,901	-		Psyr_1526	0.42	-0.2
1,716,901	-		Psyr_1526	0.42	-0.6
1,716,901	-		Psyr_1526	0.42	-1.0
1,716,925	+		Psyr_1526	0.45	-0.4
1,716,925	+		Psyr_1526	0.45	+0.4
1,716,925	+		Psyr_1526	0.45	-1.4
1,716,925	+		Psyr_1526	0.45	-0.4
1,716,926	-		Psyr_1526	0.45	-0.4
1,716,986	+		Psyr_1526	0.53	+2.0
1,716,987	-		Psyr_1526	0.53	+1.6
1,716,987	-		Psyr_1526	0.53	-1.3
1,716,987	-		Psyr_1526	0.53	+0.4
1,717,315	+				-0.8
1,717,315	+				+0.2
1,717,316	-				+0.0
1,717,500	+				-0.9
1,717,501	-				-1.4
1,717,501	-				-0.8
1,717,501	-				+0.4
1,717,510	+				+1.7
1,717,515	-				-0.1
1,717,515	-				+0.1