Experiment: DMSO
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0353 and Psyr_0354 are separated by 25 nucleotides Psyr_0354 and Psyr_0355 are separated by 387 nucleotides
Psyr_0353: Psyr_0353 - Acyl-CoA dehydrogenase, C-terminal, at 377,749 to 378,954
_0353
Psyr_0354: Psyr_0354 - Acyl-CoA dehydrogenase, C-terminal, at 378,980 to 380,302
_0354
Psyr_0355: Psyr_0355 - conserved hypothetical protein, at 380,690 to 381,409
_0355
Position (kb) 378
379
380
381 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 378.253 kb on - strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.302 kb on + strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.303 kb on - strand, within Psyr_0353 at 378.447 kb on + strand, within Psyr_0353 at 378.447 kb on + strand, within Psyr_0353 at 378.448 kb on - strand, within Psyr_0353 at 378.458 kb on + strand, within Psyr_0353 at 378.459 kb on - strand, within Psyr_0353 at 378.459 kb on - strand, within Psyr_0353 at 378.583 kb on + strand, within Psyr_0353 at 378.606 kb on - strand, within Psyr_0353 at 378.886 kb on + strand at 378.886 kb on + strand at 378.886 kb on + strand at 378.886 kb on + strand at 378.886 kb on + strand at 378.887 kb on - strand at 379.041 kb on + strand at 379.184 kb on + strand, within Psyr_0354 at 379.184 kb on + strand, within Psyr_0354 at 379.184 kb on + strand, within Psyr_0354 at 379.185 kb on - strand, within Psyr_0354 at 379.185 kb on - strand, within Psyr_0354 at 379.338 kb on + strand, within Psyr_0354 at 379.338 kb on + strand, within Psyr_0354 at 379.338 kb on + strand, within Psyr_0354 at 379.339 kb on - strand, within Psyr_0354 at 379.339 kb on - strand, within Psyr_0354 at 379.339 kb on - strand, within Psyr_0354 at 379.397 kb on + strand, within Psyr_0354 at 379.397 kb on + strand, within Psyr_0354 at 379.397 kb on + strand, within Psyr_0354 at 379.397 kb on + strand, within Psyr_0354 at 379.398 kb on - strand, within Psyr_0354 at 379.510 kb on + strand, within Psyr_0354 at 379.710 kb on + strand, within Psyr_0354 at 379.711 kb on - strand, within Psyr_0354 at 379.711 kb on - strand, within Psyr_0354 at 379.711 kb on - strand, within Psyr_0354 at 379.976 kb on + strand, within Psyr_0354 at 379.976 kb on + strand, within Psyr_0354 at 379.976 kb on + strand, within Psyr_0354 at 379.977 kb on - strand, within Psyr_0354 at 380.011 kb on + strand, within Psyr_0354 at 380.011 kb on + strand, within Psyr_0354 at 380.011 kb on + strand, within Psyr_0354 at 380.284 kb on + strand at 380.284 kb on + strand at 380.284 kb on + strand at 380.284 kb on + strand at 380.285 kb on - strand at 380.285 kb on - strand at 380.314 kb on - strand at 380.314 kb on - strand at 380.314 kb on - strand at 380.319 kb on + strand at 380.373 kb on + strand at 380.373 kb on + strand at 380.373 kb on + strand at 380.374 kb on - strand at 380.374 kb on - strand at 380.375 kb on + strand at 380.375 kb on + strand at 380.424 kb on - strand at 380.433 kb on + strand at 380.433 kb on + strand at 380.433 kb on + strand at 380.433 kb on + strand at 380.433 kb on + strand at 380.433 kb on + strand at 380.433 kb on + strand at 380.434 kb on - strand at 380.434 kb on - strand at 380.434 kb on - strand at 380.434 kb on - strand at 380.434 kb on - strand at 380.461 kb on + strand at 380.461 kb on + strand at 380.486 kb on + strand at 380.486 kb on + strand at 380.486 kb on + strand at 380.486 kb on + strand at 380.486 kb on + strand at 380.486 kb on + strand at 380.486 kb on + strand at 380.487 kb on - strand at 380.487 kb on - strand at 380.487 kb on - strand at 380.487 kb on - strand at 380.487 kb on - strand at 380.487 kb on - strand at 380.487 kb on - strand at 380.509 kb on + strand at 380.572 kb on + strand at 380.573 kb on - strand at 380.576 kb on - strand at 380.581 kb on + strand at 380.582 kb on - strand at 380.646 kb on + strand at 380.714 kb on + strand at 380.715 kb on - strand at 380.719 kb on + strand at 380.720 kb on - strand at 380.720 kb on - strand at 380.720 kb on - strand at 380.769 kb on + strand, within Psyr_0355 at 380.770 kb on - strand, within Psyr_0355 at 380.808 kb on - strand, within Psyr_0355 at 380.822 kb on + strand, within Psyr_0355 at 380.823 kb on - strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.897 kb on + strand, within Psyr_0355 at 380.898 kb on - strand, within Psyr_0355 at 380.898 kb on - strand, within Psyr_0355 at 380.898 kb on - strand, within Psyr_0355 at 380.898 kb on - strand, within Psyr_0355 at 380.898 kb on - strand, within Psyr_0355 at 380.898 kb on - strand, within Psyr_0355 at 380.990 kb on + strand, within Psyr_0355 at 380.990 kb on + strand, within Psyr_0355 at 380.990 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.009 kb on + strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.010 kb on - strand, within Psyr_0355 at 381.086 kb on + strand, within Psyr_0355 at 381.086 kb on + strand, within Psyr_0355 at 381.086 kb on + strand, within Psyr_0355 at 381.087 kb on - strand, within Psyr_0355 at 381.087 kb on - strand, within Psyr_0355 at 381.141 kb on + strand, within Psyr_0355 at 381.141 kb on + strand, within Psyr_0355 at 381.141 kb on + strand, within Psyr_0355 at 381.141 kb on + strand, within Psyr_0355 at 381.141 kb on + strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.142 kb on - strand, within Psyr_0355 at 381.185 kb on + strand, within Psyr_0355 at 381.185 kb on + strand, within Psyr_0355 at 381.185 kb on + strand, within Psyr_0355 at 381.186 kb on - strand, within Psyr_0355 at 381.186 kb on - strand, within Psyr_0355 at 381.186 kb on - strand, within Psyr_0355 at 381.237 kb on + strand, within Psyr_0355 at 381.237 kb on + strand, within Psyr_0355 at 381.237 kb on + strand, within Psyr_0355 at 381.238 kb on - strand, within Psyr_0355
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO remove 378,253 - Psyr_0353 0.42 -0.3 378,302 + Psyr_0353 0.46 -0.0 378,302 + Psyr_0353 0.46 +0.8 378,302 + Psyr_0353 0.46 -0.3 378,302 + Psyr_0353 0.46 -0.8 378,302 + Psyr_0353 0.46 -0.4 378,302 + Psyr_0353 0.46 -0.0 378,302 + Psyr_0353 0.46 -0.0 378,302 + Psyr_0353 0.46 -0.4 378,302 + Psyr_0353 0.46 -0.0 378,302 + Psyr_0353 0.46 +0.7 378,302 + Psyr_0353 0.46 -1.7 378,302 + Psyr_0353 0.46 -0.5 378,302 + Psyr_0353 0.46 -0.5 378,302 + Psyr_0353 0.46 -0.2 378,302 + Psyr_0353 0.46 -0.1 378,302 + Psyr_0353 0.46 -1.3 378,302 + Psyr_0353 0.46 -0.1 378,303 - Psyr_0353 0.46 -1.8 378,303 - Psyr_0353 0.46 -0.1 378,303 - Psyr_0353 0.46 -0.1 378,303 - Psyr_0353 0.46 +2.2 378,303 - Psyr_0353 0.46 -0.2 378,303 - Psyr_0353 0.46 +0.5 378,303 - Psyr_0353 0.46 -0.7 378,303 - Psyr_0353 0.46 -1.4 378,303 - Psyr_0353 0.46 -1.6 378,303 - Psyr_0353 0.46 +0.5 378,303 - Psyr_0353 0.46 -1.3 378,303 - Psyr_0353 0.46 -0.8 378,303 - Psyr_0353 0.46 +0.5 378,303 - Psyr_0353 0.46 -0.3 378,447 + Psyr_0353 0.58 +0.8 378,447 + Psyr_0353 0.58 +2.0 378,448 - Psyr_0353 0.58 +1.1 378,458 + Psyr_0353 0.59 -1.4 378,459 - Psyr_0353 0.59 +0.6 378,459 - Psyr_0353 0.59 -2.0 378,583 + Psyr_0353 0.69 -0.2 378,606 - Psyr_0353 0.71 +0.3 378,886 + -0.1 378,886 + +0.1 378,886 + -0.7 378,886 + -0.3 378,886 + -0.5 378,887 - +2.6 379,041 + -0.5 379,184 + Psyr_0354 0.15 -0.6 379,184 + Psyr_0354 0.15 -1.1 379,184 + Psyr_0354 0.15 -1.2 379,185 - Psyr_0354 0.15 -0.6 379,185 - Psyr_0354 0.15 -1.7 379,338 + Psyr_0354 0.27 +1.2 379,338 + Psyr_0354 0.27 +0.7 379,338 + Psyr_0354 0.27 -0.8 379,339 - Psyr_0354 0.27 +0.5 379,339 - Psyr_0354 0.27 -0.2 379,339 - Psyr_0354 0.27 +0.4 379,397 + Psyr_0354 0.32 -0.3 379,397 + Psyr_0354 0.32 -1.9 379,397 + Psyr_0354 0.32 -0.3 379,397 + Psyr_0354 0.32 -0.8 379,398 - Psyr_0354 0.32 -1.7 379,510 + Psyr_0354 0.40 +0.2 379,710 + Psyr_0354 0.55 -0.4 379,711 - Psyr_0354 0.55 -0.2 379,711 - Psyr_0354 0.55 +1.5 379,711 - Psyr_0354 0.55 -0.7 379,976 + Psyr_0354 0.75 -0.1 379,976 + Psyr_0354 0.75 -1.1 379,976 + Psyr_0354 0.75 -1.0 379,977 - Psyr_0354 0.75 -1.0 380,011 + Psyr_0354 0.78 -0.1 380,011 + Psyr_0354 0.78 -0.4 380,011 + Psyr_0354 0.78 +0.7 380,284 + +0.6 380,284 + -0.0 380,284 + +0.1 380,284 + +0.5 380,285 - -0.5 380,285 - +0.0 380,314 - -1.0 380,314 - -0.0 380,314 - -0.8 380,319 + +0.9 380,373 + +0.1 380,373 + -1.5 380,373 + -0.8 380,374 - +0.8 380,374 - +0.5 380,375 + -0.1 380,375 + +0.2 380,424 - -1.8 380,433 + +0.1 380,433 + +0.6 380,433 + -0.3 380,433 + +1.0 380,433 + -0.1 380,433 + -0.3 380,433 + -0.2 380,434 - +0.1 380,434 - -0.4 380,434 - -0.1 380,434 - +0.2 380,434 - -1.3 380,461 + -0.5 380,461 + -0.0 380,486 + -0.3 380,486 + -0.6 380,486 + -0.2 380,486 + -0.1 380,486 + +0.5 380,486 + -0.8 380,486 + +2.2 380,487 - -0.5 380,487 - +0.8 380,487 - -0.3 380,487 - +0.5 380,487 - +0.9 380,487 - +1.6 380,487 - -0.1 380,509 + +0.7 380,572 + -0.6 380,573 - +0.6 380,576 - +1.4 380,581 + -0.8 380,582 - -0.2 380,646 + -0.4 380,714 + -0.4 380,715 - +0.6 380,719 + -1.8 380,720 - -0.8 380,720 - -0.1 380,720 - -0.8 380,769 + Psyr_0355 0.11 +0.1 380,770 - Psyr_0355 0.11 -1.3 380,808 - Psyr_0355 0.16 -0.4 380,822 + Psyr_0355 0.18 -0.4 380,823 - Psyr_0355 0.18 -0.6 380,897 + Psyr_0355 0.29 -0.8 380,897 + Psyr_0355 0.29 -0.0 380,897 + Psyr_0355 0.29 +0.7 380,897 + Psyr_0355 0.29 +0.4 380,897 + Psyr_0355 0.29 -0.3 380,897 + Psyr_0355 0.29 -3.4 380,897 + Psyr_0355 0.29 +0.2 380,898 - Psyr_0355 0.29 -1.2 380,898 - Psyr_0355 0.29 -0.4 380,898 - Psyr_0355 0.29 +0.0 380,898 - Psyr_0355 0.29 +0.2 380,898 - Psyr_0355 0.29 -0.2 380,898 - Psyr_0355 0.29 +1.2 380,990 + Psyr_0355 0.42 -0.8 380,990 + Psyr_0355 0.42 +1.2 380,990 + Psyr_0355 0.42 +0.3 381,009 + Psyr_0355 0.44 -1.0 381,009 + Psyr_0355 0.44 +0.0 381,009 + Psyr_0355 0.44 +0.4 381,009 + Psyr_0355 0.44 +1.9 381,009 + Psyr_0355 0.44 +0.1 381,009 + Psyr_0355 0.44 +1.2 381,009 + Psyr_0355 0.44 -0.7 381,009 + Psyr_0355 0.44 -0.5 381,009 + Psyr_0355 0.44 +1.2 381,010 - Psyr_0355 0.44 -0.5 381,010 - Psyr_0355 0.44 -0.9 381,010 - Psyr_0355 0.44 -1.1 381,010 - Psyr_0355 0.44 +0.2 381,010 - Psyr_0355 0.44 -0.3 381,010 - Psyr_0355 0.44 +1.0 381,010 - Psyr_0355 0.44 -1.0 381,086 + Psyr_0355 0.55 -1.5 381,086 + Psyr_0355 0.55 -0.4 381,086 + Psyr_0355 0.55 -0.8 381,087 - Psyr_0355 0.55 -0.7 381,087 - Psyr_0355 0.55 +0.6 381,141 + Psyr_0355 0.63 -0.1 381,141 + Psyr_0355 0.63 +0.7 381,141 + Psyr_0355 0.63 -0.1 381,141 + Psyr_0355 0.63 +0.3 381,141 + Psyr_0355 0.63 +0.8 381,142 - Psyr_0355 0.63 -0.2 381,142 - Psyr_0355 0.63 +0.2 381,142 - Psyr_0355 0.63 -0.1 381,142 - Psyr_0355 0.63 -1.2 381,142 - Psyr_0355 0.63 +1.5 381,142 - Psyr_0355 0.63 -1.2 381,142 - Psyr_0355 0.63 -0.2 381,142 - Psyr_0355 0.63 -0.3 381,142 - Psyr_0355 0.63 +0.8 381,142 - Psyr_0355 0.63 -0.2 381,142 - Psyr_0355 0.63 +0.4 381,142 - Psyr_0355 0.63 -0.4 381,142 - Psyr_0355 0.63 +0.1 381,142 - Psyr_0355 0.63 +0.9 381,185 + Psyr_0355 0.69 -0.2 381,185 + Psyr_0355 0.69 -2.2 381,185 + Psyr_0355 0.69 +0.1 381,186 - Psyr_0355 0.69 +0.7 381,186 - Psyr_0355 0.69 -0.4 381,186 - Psyr_0355 0.69 +0.0 381,237 + Psyr_0355 0.76 -0.2 381,237 + Psyr_0355 0.76 -0.2 381,237 + Psyr_0355 0.76 -0.9 381,238 - Psyr_0355 0.76 -0.4
Or see this region's nucleotide sequence