Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4734 and Psyr_4735 are separated by 445 nucleotides Psyr_4735 and Psyr_4736 overlap by 8 nucleotides
Psyr_4734: Psyr_4734 - transcriptional regulator, TetR family, at 5,612,941 to 5,613,534
_4734
Psyr_4735: Psyr_4735 - GTP-binding protein, HSR1-related protein, at 5,613,980 to 5,615,368
_4735
Psyr_4736: Psyr_4736 - conserved hypothetical protein, at 5,615,361 to 5,616,740
_4736
Position (kb)
5613
5614
5615
5616 Strain fitness (log2 ratio)
-2
-1
0
1 at 5612.981 kb on + strand at 5613.413 kb on - strand, within Psyr_4734 at 5613.571 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.912 kb on - strand at 5613.912 kb on - strand at 5614.527 kb on + strand, within Psyr_4735 at 5614.528 kb on - strand, within Psyr_4735 at 5614.956 kb on + strand, within Psyr_4735 at 5614.957 kb on - strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5615.178 kb on + strand, within Psyr_4735 at 5615.287 kb on + strand at 5615.287 kb on + strand at 5615.287 kb on + strand at 5615.288 kb on - strand at 5615.288 kb on - strand at 5615.288 kb on - strand at 5615.288 kb on - strand at 5615.317 kb on + strand at 5615.317 kb on + strand at 5615.654 kb on + strand, within Psyr_4736 at 5615.654 kb on + strand, within Psyr_4736 at 5615.724 kb on + strand, within Psyr_4736 at 5615.848 kb on + strand, within Psyr_4736 at 5616.350 kb on + strand, within Psyr_4736 at 5616.351 kb on - strand, within Psyr_4736
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 5,612,981 + -1.5 5,613,413 - Psyr_4734 0.79 +1.5 5,613,571 + -2.2 5,613,762 + -0.2 5,613,762 + -0.2 5,613,762 + -1.3 5,613,762 + -1.7 5,613,762 + +0.0 5,613,762 + +0.1 5,613,762 + -1.2 5,613,762 + +0.0 5,613,762 + -0.1 5,613,763 - +0.3 5,613,763 - -0.0 5,613,763 - +0.5 5,613,763 - +0.4 5,613,763 - -0.5 5,613,763 - -1.2 5,613,763 - +0.2 5,613,912 - -0.6 5,613,912 - -0.7 5,614,527 + Psyr_4735 0.39 +0.7 5,614,528 - Psyr_4735 0.39 -1.0 5,614,956 + Psyr_4735 0.70 -0.4 5,614,957 - Psyr_4735 0.70 -0.7 5,614,992 + Psyr_4735 0.73 -0.4 5,614,992 + Psyr_4735 0.73 -0.3 5,614,992 + Psyr_4735 0.73 -0.4 5,614,992 + Psyr_4735 0.73 -1.0 5,614,992 + Psyr_4735 0.73 -1.8 5,614,992 + Psyr_4735 0.73 -0.1 5,614,992 + Psyr_4735 0.73 -0.8 5,614,992 + Psyr_4735 0.73 -0.2 5,614,993 - Psyr_4735 0.73 -0.6 5,614,993 - Psyr_4735 0.73 +0.3 5,614,993 - Psyr_4735 0.73 -0.4 5,614,993 - Psyr_4735 0.73 -0.2 5,614,993 - Psyr_4735 0.73 -1.0 5,614,993 - Psyr_4735 0.73 +1.3 5,615,178 + Psyr_4735 0.86 +0.4 5,615,287 + -2.6 5,615,287 + +0.4 5,615,287 + -0.4 5,615,288 - -0.2 5,615,288 - +0.3 5,615,288 - +0.7 5,615,288 - -0.6 5,615,317 + +0.4 5,615,317 + -0.7 5,615,654 + Psyr_4736 0.21 -1.7 5,615,654 + Psyr_4736 0.21 -0.3 5,615,724 + Psyr_4736 0.26 +0.9 5,615,848 + Psyr_4736 0.35 +0.0 5,616,350 + Psyr_4736 0.72 -0.0 5,616,351 - Psyr_4736 0.72 +0.4
Or see this region's nucleotide sequence