Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4664

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
5,526,961	+				-0.0
5,527,070	+				-0.6
5,527,070	+				-0.7
5,527,078	+				+0.6
5,527,078	+				-2.8
5,527,078	+				-0.1
5,527,078	+				-1.8
5,527,079	-				+0.6
5,527,079	-				+1.0
5,527,079	-				+0.9
5,527,079	-				-0.4
5,527,111	-				+0.9
5,527,146	+				+0.0
5,527,146	+				-1.3
5,527,146	+				-0.3
5,527,147	-				+0.5
5,527,147	-				-0.2
5,527,147	-				-0.1
5,527,147	-				+0.7
5,527,149	+				+0.9
5,527,149	+				+0.2
5,527,149	+				-0.9
5,527,149	+				+0.7
5,527,149	+				+0.0
5,527,149	+				-1.5
5,527,149	+				+0.2
5,527,149	+				-2.0
5,527,150	-				+0.0
5,527,150	-				+0.1
5,527,150	-				+0.4
5,527,150	-				-0.3
5,527,150	-				+0.3
5,527,231	+				-0.7
5,527,232	-				-0.7
5,527,232	-				+0.7
5,527,242	+				+0.1
5,527,242	+				+0.4
5,527,242	+				+0.3
5,527,242	+				-1.2
5,527,242	+				-1.2
5,527,244	+				+2.5
5,527,244	+				+0.1
5,527,244	+				+0.4
5,527,244	+				+0.1
5,527,244	+				+0.8
5,527,244	+				-0.7
5,527,245	-				+0.3
5,527,245	-				+0.0
5,527,245	-				+0.6
5,527,245	-				+0.8
5,527,245	-				-0.6
5,527,245	-				+0.8
5,527,245	-				-0.4
5,527,245	-				-0.5
5,527,245	-				-0.8
5,527,258	+		Psyr_4663	0.13	-0.7
5,527,258	+		Psyr_4663	0.13	-1.2
5,527,259	-		Psyr_4663	0.13	+1.0
5,527,391	+		Psyr_4663	0.45	-2.8
5,527,392	-		Psyr_4663	0.46	-0.4
5,527,449	+		Psyr_4663	0.60	-0.9
5,527,449	+		Psyr_4663	0.60	-0.3
5,527,449	+		Psyr_4663	0.60	+0.4
5,527,449	+		Psyr_4663	0.60	-0.7
5,527,449	+		Psyr_4663	0.60	-1.3
5,527,449	+		Psyr_4663	0.60	-0.1
5,527,449	+		Psyr_4663	0.60	-0.4
5,527,449	+		Psyr_4663	0.60	-0.2
5,527,450	-		Psyr_4663	0.60	-0.8
5,527,450	-		Psyr_4663	0.60	-0.7
5,527,450	-		Psyr_4663	0.60	-1.0
5,527,450	-		Psyr_4663	0.60	+1.0
5,527,451	+		Psyr_4663	0.60	-1.1
5,527,452	-		Psyr_4663	0.60	+0.1
5,527,576	+				+0.2
5,527,576	+				-0.1
5,527,576	+				-0.2
5,527,576	+				+1.2
5,527,577	-				-0.6
5,527,577	-				+0.6
5,527,577	-				-0.4
5,527,620	+				+1.3
5,527,654	+				+0.3
5,527,678	+				+2.9
5,527,769	+				-0.7
5,527,770	-				-0.7
5,527,870	-		Psyr_4664	0.16	-0.7
5,527,968	+		Psyr_4664	0.25	-0.9
5,527,968	+		Psyr_4664	0.25	+2.1
5,527,968	+		Psyr_4664	0.25	-0.2
5,527,968	+		Psyr_4664	0.25	-1.5
5,527,969	-		Psyr_4664	0.25	+1.2
5,527,969	-		Psyr_4664	0.25	+0.9
5,527,969	-		Psyr_4664	0.25	+0.2
5,528,052	+		Psyr_4664	0.32	-0.1
5,528,052	+		Psyr_4664	0.32	-0.1
5,528,052	+		Psyr_4664	0.32	+0.2
5,528,052	+		Psyr_4664	0.32	+0.4
5,528,053	-		Psyr_4664	0.32	-0.3
5,528,136	+		Psyr_4664	0.39	+0.2
5,528,136	+		Psyr_4664	0.39	+0.9
5,528,136	+		Psyr_4664	0.39	+0.7
5,528,136	+		Psyr_4664	0.39	+0.5
5,528,136	+		Psyr_4664	0.39	+0.4
5,528,136	+		Psyr_4664	0.39	-0.3
5,528,136	+		Psyr_4664	0.39	+0.3
5,528,136	+		Psyr_4664	0.39	+0.4
5,528,136	+		Psyr_4664	0.39	-0.8
5,528,136	+		Psyr_4664	0.39	+0.4
5,528,136	+		Psyr_4664	0.39	+0.7
5,528,136	+		Psyr_4664	0.39	+0.7
5,528,137	-		Psyr_4664	0.40	-0.1
5,528,287	-		Psyr_4664	0.53	+1.0
5,528,306	+		Psyr_4664	0.54	+0.3
5,528,307	-		Psyr_4664	0.55	+0.1
5,528,393	+		Psyr_4664	0.62	-0.1
5,528,394	-		Psyr_4664	0.62	-0.0
5,528,443	+		Psyr_4664	0.67	+0.0
5,528,443	+		Psyr_4664	0.67	-1.3
5,528,444	-		Psyr_4664	0.67	+0.1
5,528,444	-		Psyr_4664	0.67	-0.3
5,528,444	-		Psyr_4664	0.67	-1.3
5,528,547	+		Psyr_4664	0.76	-0.9
5,528,548	-		Psyr_4664	0.76	-0.8
5,528,549	+		Psyr_4664	0.76	-0.1
5,528,549	+		Psyr_4664	0.76	+0.3
5,528,549	+		Psyr_4664	0.76	+0.7
5,528,549	+		Psyr_4664	0.76	-1.4
5,528,549	+		Psyr_4664	0.76	-0.0
5,528,549	+		Psyr_4664	0.76	+0.7
5,528,549	+		Psyr_4664	0.76	+0.4
5,528,549	+		Psyr_4664	0.76	+0.4
5,528,549	+		Psyr_4664	0.76	-1.1
5,528,550	-		Psyr_4664	0.76	+1.3
5,528,550	-		Psyr_4664	0.76	+0.1
5,528,550	-		Psyr_4664	0.76	-1.9
5,528,550	-		Psyr_4664	0.76	+0.8
5,528,550	-		Psyr_4664	0.76	-0.7
5,528,550	-		Psyr_4664	0.76	+0.1
5,528,550	-		Psyr_4664	0.76	+0.7
5,528,585	+		Psyr_4664	0.79	+0.5
5,528,585	+		Psyr_4664	0.79	+0.5
5,528,585	+		Psyr_4664	0.79	-0.1
5,528,585	+		Psyr_4664	0.79	-0.3
5,528,585	+		Psyr_4664	0.79	-1.3
5,528,585	+		Psyr_4664	0.79	+0.8
5,528,585	+		Psyr_4664	0.79	-0.9
5,528,585	+		Psyr_4664	0.79	-0.8
5,528,585	+		Psyr_4664	0.79	-0.4
5,528,586	-		Psyr_4664	0.79	+0.5
5,528,586	-		Psyr_4664	0.79	-0.2
5,528,586	-		Psyr_4664	0.79	-0.2
5,528,586	-		Psyr_4664	0.79	+0.2
5,528,586	-		Psyr_4664	0.79	-0.0
5,528,586	-		Psyr_4664	0.79	+0.3
5,528,586	-		Psyr_4664	0.79	-0.9
5,528,586	-		Psyr_4664	0.79	+1.7
5,528,687	-		Psyr_4664	0.88	+0.2
5,528,687	-		Psyr_4664	0.88	+1.5
5,528,732	+				-1.3
5,528,732	+				-0.3
5,528,732	+				-0.4
5,528,732	+				+0.8
5,528,732	+				+0.5
5,528,732	+				-0.1
5,528,732	+				+0.9
5,528,732	+				+0.0
5,528,733	-				+0.2
5,528,733	-				-2.3
5,528,733	-				+0.8
5,528,733	-				+0.1
5,528,733	-				+0.8
5,528,733	-				+0.5
5,528,733	-				+1.2
5,528,733	-				+0.1
5,528,733	-				+0.6
5,528,733	-				+0.6
5,528,733	-				+0.4
5,528,819	-				-0.1
5,528,819	-				+1.3
5,528,918	+				-1.1
5,528,918	+				+1.0
5,528,918	+				-0.7
5,528,919	-				-1.0
5,528,919	-				+0.2
5,528,919	-				+1.3
5,528,921	+				+0.4
5,528,921	+				+0.2
5,528,921	+				-0.3
5,528,921	+				-0.6
5,528,921	+				-0.0
5,528,921	+				+0.4
5,528,921	+				+0.4
5,528,921	+				-0.1
5,528,922	-				-0.3
5,528,922	-				-0.3
5,528,922	-				-0.2
5,529,064	+				-1.5
5,529,064	+				-0.8
5,529,064	+				-1.3
5,529,064	+				+0.1
5,529,065	-				+0.4
5,529,065	-				-0.3
5,529,065	-				+0.3
5,529,065	-				+1.1
5,529,079	-				-0.5
5,529,079	-				-1.0
5,529,081	+				+0.6
5,529,081	+				-0.9
5,529,082	-				+0.3
5,529,082	-				+0.3
5,529,101	+				-1.7
5,529,101	+				-1.1
5,529,101	+				+1.7
5,529,101	+				-0.7
5,529,101	+				+0.1
5,529,101	+				-0.5
5,529,101	+				+0.4
5,529,101	+				+1.0
5,529,102	-				+1.4
5,529,102	-				-0.1
5,529,102	-				-1.3
5,529,102	-				-1.1
5,529,102	-				-0.2
5,529,102	-				-1.1
5,529,102	-				-0.9
5,529,110	+				-0.3
5,529,110	+				-0.5
5,529,121	+				-0.1
5,529,121	+				-0.4
5,529,121	+				+0.4
5,529,122	-				-1.0
5,529,122	-				-1.9
5,529,122	-				+0.2
5,529,122	-				+0.6
5,529,122	-				-0.1
5,529,126	-				-0.0
5,529,133	+				-0.3
5,529,134	-				+0.6
5,529,144	-				-0.7
5,529,144	-				+0.3
5,529,168	+				+0.9
5,529,168	+				-0.4
5,529,168	+				-1.7
5,529,168	+				-0.3
5,529,168	+				+0.2
5,529,169	-				+0.2
5,529,169	-				+0.2
5,529,169	-				+0.2
5,529,179	+				-2.0
5,529,180	-				-0.8
5,529,197	+				+0.7
5,529,198	-				+0.1
5,529,198	-				+0.0
5,529,198	-				+0.1
5,529,220	+				+0.3
5,529,220	+				+0.8
5,529,220	+				-0.6
5,529,221	-				+0.6
5,529,221	-				-0.0
5,529,221	-				+0.4
5,529,221	-				-1.3
5,529,221	-				-0.0
5,529,221	-				-0.0
5,529,221	-				+0.5
5,529,221	-				+0.7
5,529,221	-				+0.1
5,529,251	+				-0.1
5,529,251	+				+0.4
5,529,251	+				-0.1
5,529,447	+		Psyr_4665	0.12	+0.7
5,529,448	-		Psyr_4665	0.13	-0.4
5,529,448	-		Psyr_4665	0.13	-0.8
5,529,568	+		Psyr_4665	0.24	-0.8
5,529,608	+		Psyr_4665	0.27	-0.1
5,529,609	-		Psyr_4665	0.27	-0.3
5,529,646	+		Psyr_4665	0.31	+0.7
5,529,646	+		Psyr_4665	0.31	+0.0
5,529,647	-		Psyr_4665	0.31	+1.4
5,529,647	-		Psyr_4665	0.31	-0.0
5,529,647	-		Psyr_4665	0.31	-1.7
5,529,682	+		Psyr_4665	0.34	+0.7
5,529,757	+		Psyr_4665	0.41	+0.5
5,529,757	+		Psyr_4665	0.41	-1.2
5,529,758	-		Psyr_4665	0.41	-1.1
5,529,758	-		Psyr_4665	0.41	-0.9
5,529,758	-		Psyr_4665	0.41	+0.4