Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4600 and Psyr_4601 are separated by 11 nucleotides Psyr_4601 and Psyr_4602 are separated by 272 nucleotides Psyr_4602 and Psyr_4603 are separated by 111 nucleotides Psyr_4603 and Psyr_4604 are separated by 154 nucleotides
Psyr_4600: Psyr_4600 - Glycoside hydrolase, family 5, at 5,458,494 to 5,459,666
_4600
Psyr_4601: Psyr_4601 - hypothetical protein, at 5,459,678 to 5,459,863
_4601
Psyr_4602: Psyr_4602 - hypothetical protein, at 5,460,136 to 5,460,579
_4602
Psyr_4603: Psyr_4603 - phage repressor protein, Serine peptidase, MEROPS family S24, at 5,460,691 to 5,461,380
_4603
Psyr_4604: Psyr_4604 - hypothetical protein, at 5,461,535 to 5,461,783
_4604
Position (kb) 5460
5461 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.612 kb on + strand at 5459.612 kb on + strand at 5459.612 kb on + strand at 5459.613 kb on - strand at 5459.613 kb on - strand at 5459.613 kb on - strand at 5459.616 kb on + strand at 5459.617 kb on - strand at 5459.617 kb on - strand at 5459.617 kb on - strand at 5459.627 kb on + strand at 5459.627 kb on + strand at 5459.628 kb on - strand at 5459.673 kb on + strand at 5459.673 kb on + strand at 5459.674 kb on - strand at 5459.679 kb on + strand at 5459.679 kb on + strand at 5459.679 kb on + strand at 5459.679 kb on + strand at 5459.680 kb on - strand at 5459.680 kb on - strand at 5459.680 kb on - strand at 5459.680 kb on - strand at 5459.713 kb on + strand, within Psyr_4601 at 5459.714 kb on - strand, within Psyr_4601 at 5459.714 kb on - strand, within Psyr_4601 at 5459.805 kb on + strand, within Psyr_4601 at 5459.848 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5460.242 kb on + strand, within Psyr_4602 at 5460.311 kb on + strand, within Psyr_4602 at 5460.311 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.467 kb on + strand, within Psyr_4602 at 5460.467 kb on + strand, within Psyr_4602 at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.566 kb on - strand at 5460.566 kb on - strand at 5460.566 kb on - strand at 5460.566 kb on - strand at 5460.594 kb on - strand at 5460.594 kb on - strand at 5460.594 kb on - strand at 5460.647 kb on + strand at 5460.694 kb on + strand at 5461.473 kb on + strand at 5461.473 kb on + strand at 5461.473 kb on + strand at 5461.473 kb on + strand at 5461.474 kb on - strand at 5461.474 kb on - strand at 5461.474 kb on - strand at 5461.474 kb on - strand at 5461.574 kb on + strand, within Psyr_4604 at 5461.574 kb on + strand, within Psyr_4604 at 5461.574 kb on + strand, within Psyr_4604 at 5461.575 kb on - strand, within Psyr_4604 at 5461.575 kb on - strand, within Psyr_4604
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 5,459,320 + Psyr_4600 0.70 +0.1 5,459,320 + Psyr_4600 0.70 -0.9 5,459,320 + Psyr_4600 0.70 -1.4 5,459,320 + Psyr_4600 0.70 +0.8 5,459,320 + Psyr_4600 0.70 +0.1 5,459,320 + Psyr_4600 0.70 +0.1 5,459,320 + Psyr_4600 0.70 -0.2 5,459,320 + Psyr_4600 0.70 -0.4 5,459,320 + Psyr_4600 0.70 +0.4 5,459,320 + Psyr_4600 0.70 +0.7 5,459,320 + Psyr_4600 0.70 -1.0 5,459,320 + Psyr_4600 0.70 -0.4 5,459,321 - Psyr_4600 0.71 +1.6 5,459,321 - Psyr_4600 0.71 -1.2 5,459,321 - Psyr_4600 0.71 +0.3 5,459,612 + +0.4 5,459,612 + +0.3 5,459,612 + -0.8 5,459,613 - -0.1 5,459,613 - -0.3 5,459,613 - -0.4 5,459,616 + -0.7 5,459,617 - -1.1 5,459,617 - -1.9 5,459,617 - -0.1 5,459,627 + -1.4 5,459,627 + +0.1 5,459,628 - +0.0 5,459,673 + -2.0 5,459,673 + +1.3 5,459,674 - +0.2 5,459,679 + -0.6 5,459,679 + +0.1 5,459,679 + +0.3 5,459,679 + -0.1 5,459,680 - +0.7 5,459,680 - -0.3 5,459,680 - +1.3 5,459,680 - -0.5 5,459,713 + Psyr_4601 0.19 +1.4 5,459,714 - Psyr_4601 0.19 -0.5 5,459,714 - Psyr_4601 0.19 -0.2 5,459,805 + Psyr_4601 0.68 -0.5 5,459,848 + -1.7 5,459,865 + -0.5 5,459,865 + +0.1 5,459,865 + -0.2 5,459,865 + -0.0 5,459,865 + -2.7 5,459,865 + +0.8 5,459,865 + +0.7 5,459,865 + -0.6 5,459,865 + -1.7 5,459,865 + +0.1 5,459,865 + +1.8 5,459,865 + -0.3 5,459,866 - +2.3 5,459,866 - -0.4 5,459,866 - -0.3 5,459,866 - +0.1 5,459,866 - -0.4 5,459,866 - +0.5 5,459,866 - +3.9 5,459,866 - +0.8 5,459,866 - -2.4 5,459,866 - -0.6 5,459,866 - +0.6 5,459,866 - -0.2 5,459,866 - +1.1 5,459,866 - +0.2 5,459,866 - +1.3 5,459,866 - -0.9 5,460,242 + Psyr_4602 0.24 -0.3 5,460,311 + Psyr_4602 0.39 -1.1 5,460,311 + Psyr_4602 0.39 -1.1 5,460,403 + Psyr_4602 0.60 -0.0 5,460,403 + Psyr_4602 0.60 -1.2 5,460,403 + Psyr_4602 0.60 +1.1 5,460,403 + Psyr_4602 0.60 +0.1 5,460,403 + Psyr_4602 0.60 +0.5 5,460,403 + Psyr_4602 0.60 +0.8 5,460,403 + Psyr_4602 0.60 -1.0 5,460,403 + Psyr_4602 0.60 -0.4 5,460,403 + Psyr_4602 0.60 -0.6 5,460,403 + Psyr_4602 0.60 +0.2 5,460,403 + Psyr_4602 0.60 -0.2 5,460,403 + Psyr_4602 0.60 +0.9 5,460,403 + Psyr_4602 0.60 -0.2 5,460,403 + Psyr_4602 0.60 -0.4 5,460,403 + Psyr_4602 0.60 +0.1 5,460,404 - Psyr_4602 0.60 +0.3 5,460,404 - Psyr_4602 0.60 -0.4 5,460,404 - Psyr_4602 0.60 -0.7 5,460,404 - Psyr_4602 0.60 +0.6 5,460,404 - Psyr_4602 0.60 +1.0 5,460,404 - Psyr_4602 0.60 -0.5 5,460,404 - Psyr_4602 0.60 -1.0 5,460,404 - Psyr_4602 0.60 +0.7 5,460,404 - Psyr_4602 0.60 -1.4 5,460,404 - Psyr_4602 0.60 -1.0 5,460,404 - Psyr_4602 0.60 -0.4 5,460,404 - Psyr_4602 0.60 -3.5 5,460,404 - Psyr_4602 0.60 +0.9 5,460,404 - Psyr_4602 0.60 +1.6 5,460,404 - Psyr_4602 0.60 +0.9 5,460,404 - Psyr_4602 0.60 -0.5 5,460,404 - Psyr_4602 0.60 +0.2 5,460,404 - Psyr_4602 0.60 +0.2 5,460,404 - Psyr_4602 0.60 +0.5 5,460,404 - Psyr_4602 0.60 -0.2 5,460,404 - Psyr_4602 0.60 -1.3 5,460,404 - Psyr_4602 0.60 -1.3 5,460,404 - Psyr_4602 0.60 +0.7 5,460,405 + Psyr_4602 0.61 +0.2 5,460,405 + Psyr_4602 0.61 +0.4 5,460,405 + Psyr_4602 0.61 +0.2 5,460,405 + Psyr_4602 0.61 -0.6 5,460,405 + Psyr_4602 0.61 -0.5 5,460,405 + Psyr_4602 0.61 -0.1 5,460,405 + Psyr_4602 0.61 +0.8 5,460,405 + Psyr_4602 0.61 +0.6 5,460,405 + Psyr_4602 0.61 +0.1 5,460,405 + Psyr_4602 0.61 -0.2 5,460,405 + Psyr_4602 0.61 -2.4 5,460,405 + Psyr_4602 0.61 -0.1 5,460,405 + Psyr_4602 0.61 +0.5 5,460,405 + Psyr_4602 0.61 -0.3 5,460,405 + Psyr_4602 0.61 +0.0 5,460,405 + Psyr_4602 0.61 +0.4 5,460,406 - Psyr_4602 0.61 +0.5 5,460,406 - Psyr_4602 0.61 -0.3 5,460,406 - Psyr_4602 0.61 -0.3 5,460,406 - Psyr_4602 0.61 +0.7 5,460,406 - Psyr_4602 0.61 -0.5 5,460,406 - Psyr_4602 0.61 +0.8 5,460,406 - Psyr_4602 0.61 -1.3 5,460,406 - Psyr_4602 0.61 +0.2 5,460,406 - Psyr_4602 0.61 -1.2 5,460,406 - Psyr_4602 0.61 -0.4 5,460,406 - Psyr_4602 0.61 -2.0 5,460,406 - Psyr_4602 0.61 +0.4 5,460,406 - Psyr_4602 0.61 -1.2 5,460,406 - Psyr_4602 0.61 +0.2 5,460,407 + Psyr_4602 0.61 -0.0 5,460,407 + Psyr_4602 0.61 -0.1 5,460,407 + Psyr_4602 0.61 -0.5 5,460,407 + Psyr_4602 0.61 +1.1 5,460,407 + Psyr_4602 0.61 +0.2 5,460,407 + Psyr_4602 0.61 +0.9 5,460,407 + Psyr_4602 0.61 +0.1 5,460,407 + Psyr_4602 0.61 +0.0 5,460,407 + Psyr_4602 0.61 +0.6 5,460,407 + Psyr_4602 0.61 -0.3 5,460,407 + Psyr_4602 0.61 +0.5 5,460,408 - Psyr_4602 0.61 -1.9 5,460,408 - Psyr_4602 0.61 +0.0 5,460,408 - Psyr_4602 0.61 -0.5 5,460,408 - Psyr_4602 0.61 +0.5 5,460,408 - Psyr_4602 0.61 -0.7 5,460,408 - Psyr_4602 0.61 +0.2 5,460,408 - Psyr_4602 0.61 -1.2 5,460,467 + Psyr_4602 0.75 -0.4 5,460,467 + Psyr_4602 0.75 +0.1 5,460,565 + +1.3 5,460,565 + +0.6 5,460,565 + +0.5 5,460,565 + -1.7 5,460,565 + -0.3 5,460,566 - +0.6 5,460,566 - -1.0 5,460,566 - +0.1 5,460,566 - +1.0 5,460,594 - -0.7 5,460,594 - -0.3 5,460,594 - +0.2 5,460,647 + -0.9 5,460,694 + +0.6 5,461,473 + +0.5 5,461,473 + +0.6 5,461,473 + +0.9 5,461,473 + -0.6 5,461,474 - -0.8 5,461,474 - -0.5 5,461,474 - -0.8 5,461,474 - +2.3 5,461,574 + Psyr_4604 0.16 -0.3 5,461,574 + Psyr_4604 0.16 +0.1 5,461,574 + Psyr_4604 0.16 -0.1 5,461,575 - Psyr_4604 0.16 -0.5 5,461,575 - Psyr_4604 0.16 +0.6
Or see this region's nucleotide sequence