Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4900

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
5,811,628	+		Psyr_4899	0.70	+0.1
5,811,628	+		Psyr_4899	0.70	-1.4
5,811,628	+		Psyr_4899	0.70	+0.5
5,811,628	+		Psyr_4899	0.70	-1.9
5,811,628	+		Psyr_4899	0.70	-0.4
5,811,628	+		Psyr_4899	0.70	-1.0
5,811,629	-		Psyr_4899	0.70	+1.1
5,811,629	-		Psyr_4899	0.70	-0.7
5,811,629	-		Psyr_4899	0.70	-1.5
5,811,629	-		Psyr_4899	0.70	-1.7
5,811,630	+		Psyr_4899	0.70	-0.9
5,811,630	+		Psyr_4899	0.70	-0.3
5,811,630	+		Psyr_4899	0.70	-0.5
5,811,630	+		Psyr_4899	0.70	-0.1
5,811,630	+		Psyr_4899	0.70	-1.4
5,811,630	+		Psyr_4899	0.70	-0.1
5,811,630	+		Psyr_4899	0.70	-1.5
5,811,630	+		Psyr_4899	0.70	+2.9
5,811,630	+		Psyr_4899	0.70	+0.9
5,811,631	-		Psyr_4899	0.71	-2.2
5,811,631	-		Psyr_4899	0.71	+0.2
5,811,631	-		Psyr_4899	0.71	-0.6
5,811,631	-		Psyr_4899	0.71	-1.0
5,811,697	+		Psyr_4899	0.74	-0.4
5,811,697	+		Psyr_4899	0.74	-0.3
5,811,697	+		Psyr_4899	0.74	-0.7
5,811,698	-		Psyr_4899	0.75	-0.8
5,811,698	-		Psyr_4899	0.75	+0.3
5,811,698	-		Psyr_4899	0.75	-0.4
5,811,698	-		Psyr_4899	0.75	-0.3
5,811,699	+		Psyr_4899	0.75	+0.4
5,811,699	+		Psyr_4899	0.75	-0.3
5,811,699	+		Psyr_4899	0.75	+0.3
5,811,699	+		Psyr_4899	0.75	+0.1
5,811,700	-		Psyr_4899	0.75	-1.0
5,811,700	-		Psyr_4899	0.75	-2.3
5,811,700	-		Psyr_4899	0.75	-1.5
5,811,837	+		Psyr_4899	0.83	-0.1
5,811,837	+		Psyr_4899	0.83	+0.9
5,811,837	+		Psyr_4899	0.83	-0.6
5,811,837	+		Psyr_4899	0.83	+0.3
5,811,837	+		Psyr_4899	0.83	+0.5
5,811,838	-		Psyr_4899	0.83	+0.7
5,811,838	-		Psyr_4899	0.83	-2.6
5,811,838	-		Psyr_4899	0.83	-0.7
5,811,838	-		Psyr_4899	0.83	+0.4
5,811,838	-		Psyr_4899	0.83	+0.4
5,811,838	-		Psyr_4899	0.83	-0.1
5,811,838	-		Psyr_4899	0.83	+0.7
5,811,941	-		Psyr_4899	0.89	-0.1
5,812,121	+				+1.0
5,812,121	+				-0.5
5,812,122	-				-1.3
5,812,122	-				-0.0
5,812,122	-				+1.0
5,812,122	-				-0.5
5,812,123	+				+0.2
5,812,123	+				-0.8
5,812,123	+				+0.5
5,812,123	+				-1.7
5,812,123	+				+0.2
5,812,123	+				-0.2
5,812,123	+				-0.3
5,812,123	+				+1.0
5,812,123	+				+0.1
5,812,123	+				-0.5
5,812,123	+				+0.7
5,812,124	-				-0.9
5,812,124	-				-3.2
5,812,124	-				-0.9
5,812,124	-				-0.1
5,812,124	-				+0.2
5,812,124	-				+1.1
5,812,124	-				-0.7
5,812,124	-				+1.2
5,812,124	-				-0.1
5,812,124	-				-1.1
5,812,124	-				-0.7
5,812,127	+				-0.2
5,812,220	+				-0.2
5,812,262	+				+0.1
5,812,263	-				-1.3
5,812,263	-				-1.2
5,812,282	+				+1.7
5,812,282	+				-0.5
5,812,282	+				-1.2
5,812,282	+				+0.2
5,812,282	+				-1.7
5,812,283	-				-0.4
5,812,283	-				+0.6
5,812,283	-				+0.1
5,812,283	-				+0.5
5,812,283	-				-0.6
5,812,283	-				-0.0
5,812,283	-				-0.8
5,812,283	-				+0.5
5,812,283	-				+0.2
5,812,283	-				-0.6
5,812,294	+				+0.6
5,812,295	-				+0.4
5,812,295	-				-0.1
5,812,295	-				-0.1
5,812,295	-				-0.3
5,812,295	-				+0.2
5,812,305	-				+0.1
5,812,306	-				+0.0
5,812,306	-				-0.8
5,812,308	+				-0.1
5,812,309	-				+1.3
5,812,312	+				-0.5
5,812,313	-				-0.3
5,812,349	+				+0.0
5,812,350	-				-1.0
5,812,392	+				+0.5
5,812,392	+				-0.2
5,812,393	-				+0.3
5,812,393	-				-0.4
5,812,393	-				-1.9
5,812,446	+				+0.6
5,812,446	+				+0.8
5,812,446	+				+1.3
5,812,446	+				-1.3
5,812,447	-				-0.0
5,812,447	-				-0.7
5,812,448	+				+0.9
5,812,448	+				-0.0
5,812,448	+				-0.5
5,812,493	-				-0.1
5,812,576	-				+1.0
5,812,577	+				-0.4
5,812,577	+				+1.2
5,812,577	+				-0.4
5,812,577	+				+0.3
5,812,577	+				+0.1
5,812,577	+				+0.2
5,812,578	-				-0.8
5,812,578	-				-1.6
5,812,578	-				-0.8
5,812,578	-				-1.2
5,812,651	+				-0.1
5,812,652	-				+0.7
5,812,652	-				+0.0
5,812,929	+		Psyr_4900	0.14	-0.1
5,812,929	+		Psyr_4900	0.14	-0.1
5,812,930	-		Psyr_4900	0.14	-3.0
5,812,930	-		Psyr_4900	0.14	+0.0
5,812,930	-		Psyr_4900	0.14	+1.3
5,813,662	+		Psyr_4900	0.47	-0.9
5,813,662	+		Psyr_4900	0.47	+0.5
5,813,662	+		Psyr_4900	0.47	+1.3
5,813,663	-		Psyr_4900	0.47	-0.5
5,813,966	-		Psyr_4900	0.61	+0.9
5,813,966	-		Psyr_4900	0.61	-0.7
5,813,966	-		Psyr_4900	0.61	+3.2
5,813,966	-		Psyr_4900	0.61	-1.8
5,814,095	+		Psyr_4900	0.66	+0.7
5,814,095	+		Psyr_4900	0.66	-0.9
5,814,095	+		Psyr_4900	0.66	-2.0
5,814,095	+		Psyr_4900	0.66	-1.9
5,814,096	-		Psyr_4900	0.66	+0.1
5,814,096	-		Psyr_4900	0.66	-0.6
5,814,096	-		Psyr_4900	0.66	+0.9
5,814,096	-		Psyr_4900	0.66	-0.2
5,814,096	-		Psyr_4900	0.66	-1.0
5,814,159	+		Psyr_4900	0.69	-0.4
5,814,159	+		Psyr_4900	0.69	+0.6
5,814,159	+		Psyr_4900	0.69	-2.1
5,814,159	+		Psyr_4900	0.69	-0.6
5,814,159	+		Psyr_4900	0.69	-1.5
5,814,159	+		Psyr_4900	0.69	-1.0
5,814,160	-		Psyr_4900	0.69	-0.0
5,814,160	-		Psyr_4900	0.69	-2.6
5,814,160	-		Psyr_4900	0.69	+0.5
5,814,373	+		Psyr_4900	0.79	+0.0
5,814,373	+		Psyr_4900	0.79	+0.4
5,814,373	+		Psyr_4900	0.79	-0.9
5,814,374	-		Psyr_4900	0.79	-1.2
5,814,459	+		Psyr_4900	0.83	-1.9
5,814,560	+		Psyr_4900	0.87	-0.7
5,814,843	-				-0.8
5,814,901	-				+0.8
5,815,087	+		Psyr_4901	0.14	-0.5
5,815,087	+		Psyr_4901	0.14	-0.3
5,815,087	+		Psyr_4901	0.14	+0.1
5,815,088	-		Psyr_4901	0.14	+1.7
5,815,154	+		Psyr_4901	0.20	-0.3
5,815,154	+		Psyr_4901	0.20	+1.0
5,815,154	+		Psyr_4901	0.20	+0.0
5,815,154	+		Psyr_4901	0.20	-0.1
5,815,154	+		Psyr_4901	0.20	-1.5
5,815,155	-		Psyr_4901	0.20	-0.1
5,815,155	-		Psyr_4901	0.20	+0.7
5,815,155	-		Psyr_4901	0.20	-0.4
5,815,155	-		Psyr_4901	0.20	-0.7
5,815,155	-		Psyr_4901	0.20	+1.4
5,815,155	-		Psyr_4901	0.20	-0.0
5,815,155	-		Psyr_4901	0.20	-0.4
5,815,155	-		Psyr_4901	0.20	+0.3
5,815,183	+		Psyr_4901	0.23	-0.3
5,815,183	+		Psyr_4901	0.23	+0.5
5,815,183	+		Psyr_4901	0.23	-1.5
5,815,184	-		Psyr_4901	0.23	+0.3
5,815,184	-		Psyr_4901	0.23	+0.3
5,815,184	-		Psyr_4901	0.23	-0.7
5,815,474	+		Psyr_4901	0.50	-0.0
5,815,474	+		Psyr_4901	0.50	+0.7
5,815,474	+		Psyr_4901	0.50	+1.0
5,815,474	+		Psyr_4901	0.50	-0.3
5,815,474	+		Psyr_4901	0.50	-0.4
5,815,474	+		Psyr_4901	0.50	-0.0
5,815,474	+		Psyr_4901	0.50	+0.0
5,815,474	+		Psyr_4901	0.50	+0.7
5,815,475	-		Psyr_4901	0.50	-2.3
5,815,475	-		Psyr_4901	0.50	+0.9
5,815,475	-		Psyr_4901	0.50	+0.0
5,815,809	+		Psyr_4901	0.82	-0.5
5,815,810	-		Psyr_4901	0.82	-0.2