Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1399

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
1,583,917	+		Psyr_1398	0.21	+1.0
1,583,917	+		Psyr_1398	0.21	+2.0
1,583,918	-		Psyr_1398	0.22	-0.3
1,583,918	-		Psyr_1398	0.22	+0.9
1,583,918	-		Psyr_1398	0.22	+0.5
1,584,017	+		Psyr_1398	0.32	-0.1
1,584,019	+		Psyr_1398	0.32	+0.1
1,584,019	+		Psyr_1398	0.32	-0.1
1,584,019	+		Psyr_1398	0.32	-1.6
1,584,019	+		Psyr_1398	0.32	-0.6
1,584,019	+		Psyr_1398	0.32	-1.1
1,584,019	+		Psyr_1398	0.32	-0.5
1,584,019	+		Psyr_1398	0.32	+0.5
1,584,019	+		Psyr_1398	0.32	+0.1
1,584,019	+		Psyr_1398	0.32	+0.8
1,584,019	+		Psyr_1398	0.32	+0.6
1,584,019	+		Psyr_1398	0.32	-0.4
1,584,019	+		Psyr_1398	0.32	+0.4
1,584,019	+		Psyr_1398	0.32	-0.1
1,584,019	+		Psyr_1398	0.32	+0.4
1,584,019	+		Psyr_1398	0.32	-1.1
1,584,019	+		Psyr_1398	0.32	+1.3
1,584,019	+		Psyr_1398	0.32	+0.7
1,584,019	+		Psyr_1398	0.32	+0.6
1,584,019	+		Psyr_1398	0.32	-0.2
1,584,019	+		Psyr_1398	0.32	-0.3
1,584,019	+		Psyr_1398	0.32	-0.5
1,584,019	+		Psyr_1398	0.32	-0.7
1,584,019	+		Psyr_1398	0.32	+1.0
1,584,020	-		Psyr_1398	0.32	+0.1
1,584,020	-		Psyr_1398	0.32	+0.5
1,584,020	-		Psyr_1398	0.32	-0.9
1,584,020	-		Psyr_1398	0.32	+0.8
1,584,020	-		Psyr_1398	0.32	-0.9
1,584,020	-		Psyr_1398	0.32	-0.1
1,584,020	-		Psyr_1398	0.32	-1.1
1,584,020	-		Psyr_1398	0.32	+1.1
1,584,020	-		Psyr_1398	0.32	+0.5
1,584,020	-		Psyr_1398	0.32	+1.3
1,584,020	-		Psyr_1398	0.32	-0.7
1,584,020	-		Psyr_1398	0.32	-1.5
1,584,020	-		Psyr_1398	0.32	-0.2
1,584,020	-		Psyr_1398	0.32	+0.1
1,584,020	-		Psyr_1398	0.32	+1.0
1,584,020	-		Psyr_1398	0.32	-0.0
1,584,020	-		Psyr_1398	0.32	+0.4
1,584,020	-		Psyr_1398	0.32	-1.8
1,584,020	-		Psyr_1398	0.32	-1.1
1,584,020	-		Psyr_1398	0.32	+2.0
1,584,020	-		Psyr_1398	0.32	-0.6
1,584,020	-		Psyr_1398	0.32	+0.3
1,584,020	-		Psyr_1398	0.32	-0.3
1,584,385	+		Psyr_1398	0.70	-0.3
1,584,386	-		Psyr_1398	0.70	+0.7
1,584,413	+		Psyr_1398	0.73	+0.1
1,584,413	+		Psyr_1398	0.73	+0.5
1,584,413	+		Psyr_1398	0.73	-0.1
1,584,413	+		Psyr_1398	0.73	+0.2
1,584,414	-		Psyr_1398	0.73	-0.3
1,584,414	-		Psyr_1398	0.73	+0.5
1,584,414	-		Psyr_1398	0.73	+0.2
1,584,414	-		Psyr_1398	0.73	-1.3
1,584,416	-		Psyr_1398	0.74	+1.2
1,584,424	+		Psyr_1398	0.74	+0.7
1,584,648	+				-0.4
1,584,649	-				-0.3
1,586,517	-				-0.7
1,586,598	+				+1.3
1,586,598	+				+0.2
1,586,598	+				-1.3
1,586,598	+				-0.7
1,586,598	+				+1.3
1,586,598	+				-0.4
1,586,599	-				-1.1
1,586,599	-				-1.4
1,586,599	-				-1.4
1,586,599	-				-1.7
1,586,599	-				-1.9
1,586,599	-				-0.7
1,586,602	-				-0.9
1,586,622	+				-1.9
1,586,623	-				-0.4
1,586,753	+				-2.0
1,586,753	+				+0.7
1,586,753	+				-2.2
1,586,754	-				-2.1
1,586,754	-				+0.1
1,586,757	+		Psyr_1400	0.10	-2.4
1,586,757	+		Psyr_1400	0.10	-0.0
1,586,757	+		Psyr_1400	0.10	-1.2
1,586,757	+		Psyr_1400	0.10	-0.3
1,586,757	+		Psyr_1400	0.10	-2.5
1,586,757	+		Psyr_1400	0.10	-2.3
1,586,757	+		Psyr_1400	0.10	-0.7
1,586,757	+		Psyr_1400	0.10	-2.6
1,586,758	-		Psyr_1400	0.10	-0.0
1,586,758	-		Psyr_1400	0.10	-0.7
1,586,758	-		Psyr_1400	0.10	-1.3
1,586,758	-		Psyr_1400	0.10	-3.2
1,586,758	-		Psyr_1400	0.10	-0.7
1,586,758	-		Psyr_1400	0.10	-1.1
1,586,758	-		Psyr_1400	0.10	-1.7
1,586,875	+		Psyr_1400	0.19	-1.0
1,587,029	-		Psyr_1400	0.30	+2.3
1,587,029	-		Psyr_1400	0.30	-2.8
1,587,048	+		Psyr_1400	0.32	-2.7
1,587,049	-		Psyr_1400	0.32	-1.0
1,587,117	+		Psyr_1400	0.37	-2.7
1,587,117	+		Psyr_1400	0.37	-1.0
1,587,118	-		Psyr_1400	0.37	+0.6
1,587,190	-		Psyr_1400	0.42	-0.6
1,587,240	+		Psyr_1400	0.46	-1.7
1,587,240	+		Psyr_1400	0.46	-0.3
1,587,240	+		Psyr_1400	0.46	+0.3
1,587,240	+		Psyr_1400	0.46	-0.1
1,587,240	+		Psyr_1400	0.46	-2.1
1,587,240	+		Psyr_1400	0.46	+2.9
1,587,240	+		Psyr_1400	0.46	-0.3
1,587,240	+		Psyr_1400	0.46	-1.1
1,587,240	+		Psyr_1400	0.46	-2.4
1,587,240	+		Psyr_1400	0.46	-1.5
1,587,240	+		Psyr_1400	0.46	-0.7
1,587,240	+		Psyr_1400	0.46	+1.9
1,587,240	+		Psyr_1400	0.46	-1.9
1,587,240	+		Psyr_1400	0.46	-3.2
1,587,241	-		Psyr_1400	0.46	-0.1
1,587,241	-		Psyr_1400	0.46	-1.2
1,587,241	-		Psyr_1400	0.46	-0.3
1,587,241	-		Psyr_1400	0.46	-1.9
1,587,241	-		Psyr_1400	0.46	-1.4
1,587,241	-		Psyr_1400	0.46	-1.0
1,587,241	-		Psyr_1400	0.46	+0.1
1,587,241	-		Psyr_1400	0.46	+2.3
1,587,241	-		Psyr_1400	0.46	-0.9
1,587,255	+		Psyr_1400	0.47	-1.5
1,587,258	+		Psyr_1400	0.47	-0.1
1,587,259	-		Psyr_1400	0.47	-0.1
1,587,259	-		Psyr_1400	0.47	+0.9
1,587,259	-		Psyr_1400	0.47	-2.4
1,587,259	-		Psyr_1400	0.47	-1.4
1,587,259	-		Psyr_1400	0.47	-2.7
1,587,291	+		Psyr_1400	0.50	-2.4
1,587,292	-		Psyr_1400	0.50	+2.3
1,587,292	-		Psyr_1400	0.50	-1.5
1,587,316	+		Psyr_1400	0.52	+0.3
1,587,316	+		Psyr_1400	0.52	-2.0
1,587,316	+		Psyr_1400	0.52	-2.1
1,587,316	+		Psyr_1400	0.52	-1.3
1,587,317	-		Psyr_1400	0.52	-2.2
1,587,317	-		Psyr_1400	0.52	-2.3
1,587,317	-		Psyr_1400	0.52	-1.5
1,587,324	+		Psyr_1400	0.52	+0.1
1,587,324	+		Psyr_1400	0.52	-1.9
1,587,324	+		Psyr_1400	0.52	+1.3
1,587,324	+		Psyr_1400	0.52	-1.5
1,587,324	+		Psyr_1400	0.52	-1.3
1,587,325	-		Psyr_1400	0.52	-0.8
1,587,325	-		Psyr_1400	0.52	-0.7
1,587,369	+		Psyr_1400	0.56	-0.3
1,587,369	+		Psyr_1400	0.56	+1.3
1,587,369	+		Psyr_1400	0.56	-2.4
1,587,369	+		Psyr_1400	0.56	-1.9
1,587,369	+		Psyr_1400	0.56	-0.7
1,587,369	+		Psyr_1400	0.56	-0.3
1,587,369	+		Psyr_1400	0.56	-1.7
1,587,369	+		Psyr_1400	0.56	-1.3
1,587,370	-		Psyr_1400	0.56	-1.2
1,587,370	-		Psyr_1400	0.56	-0.7
1,587,370	-		Psyr_1400	0.56	-0.5
1,587,370	-		Psyr_1400	0.56	-2.3
1,587,370	-		Psyr_1400	0.56	-3.0
1,587,370	-		Psyr_1400	0.56	-0.5
1,587,370	-		Psyr_1400	0.56	-1.6
1,587,370	-		Psyr_1400	0.56	-1.7
1,587,370	-		Psyr_1400	0.56	-2.6
1,587,370	-		Psyr_1400	0.56	-2.8
1,587,391	+		Psyr_1400	0.57	-2.4
1,587,392	-		Psyr_1400	0.57	+1.7
1,587,392	-		Psyr_1400	0.57	-0.8
1,587,423	+		Psyr_1400	0.60	-0.7
1,587,423	+		Psyr_1400	0.60	-2.5
1,587,423	+		Psyr_1400	0.60	-0.2
1,587,423	+		Psyr_1400	0.60	-1.0
1,587,424	-		Psyr_1400	0.60	+0.2
1,587,424	-		Psyr_1400	0.60	-1.8
1,587,424	-		Psyr_1400	0.60	-1.9
1,587,424	-		Psyr_1400	0.60	-0.1
1,587,424	-		Psyr_1400	0.60	-1.0