Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002128

Experiment: R2A with PEG 6000 16 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with PEG 6000 16 vol%
2,382,444	-		ABIE53_002126	0.18	-0.6
2,382,528	+		ABIE53_002126	0.49	+0.4
2,382,529	-		ABIE53_002126	0.49	-0.2
2,382,529	-		ABIE53_002126	0.49	+0.6
2,382,530	+		ABIE53_002126	0.50	+1.0
2,382,530	+		ABIE53_002126	0.50	-0.1
2,382,675	+				+0.5
2,382,676	-				-0.7
2,382,676	-				+1.0
2,382,688	+				+0.1
2,382,688	+				-0.1
2,382,689	-				+1.7
2,382,751	+				+1.6
2,382,812	-				+1.5
2,382,828	-				+0.1
2,382,867	+		ABIE53_002127	0.11	+0.7
2,382,869	+		ABIE53_002127	0.11	-3.1
2,382,928	+		ABIE53_002127	0.22	+0.3
2,382,955	+		ABIE53_002127	0.28	-0.2
2,382,955	+		ABIE53_002127	0.28	-0.3
2,382,955	+		ABIE53_002127	0.28	-0.7
2,382,955	+		ABIE53_002127	0.28	+1.5
2,382,956	-		ABIE53_002127	0.28	+0.1
2,382,956	-		ABIE53_002127	0.28	-1.3
2,383,051	+		ABIE53_002127	0.46	+0.9
2,383,051	+		ABIE53_002127	0.46	+0.5
2,383,136	+		ABIE53_002127	0.62	+1.3
2,383,137	-		ABIE53_002127	0.62	+0.4
2,383,218	+		ABIE53_002127	0.78	+0.3
2,383,219	-		ABIE53_002127	0.78	+0.3
2,383,219	-		ABIE53_002127	0.78	+0.5
2,383,222	+		ABIE53_002127	0.78	+0.5
2,383,222	+		ABIE53_002127	0.78	+1.4
2,383,223	-		ABIE53_002127	0.79	+0.7
2,383,223	-		ABIE53_002127	0.79	+2.7
2,383,269	-		ABIE53_002127	0.87	-0.4
2,383,302	+				-0.9
2,383,302	+				-0.6
2,383,303	-				-0.7
2,383,394	+				+0.7
2,383,395	-				+1.1
2,383,399	+				+0.5
2,383,400	-				-1.3
2,383,400	-				+0.1
2,383,400	-				+1.0
2,383,424	-				+0.5
2,383,524	-				-1.5
2,383,556	-				-0.3
2,383,576	+		ABIE53_002128	0.10	-0.9
2,383,577	-		ABIE53_002128	0.10	+0.6
2,383,577	-		ABIE53_002128	0.10	-0.4
2,383,577	-		ABIE53_002128	0.10	-0.5
2,383,577	-		ABIE53_002128	0.10	+1.1
2,383,577	-		ABIE53_002128	0.10	+1.7
2,383,656	+		ABIE53_002128	0.16	+1.8
2,383,712	+		ABIE53_002128	0.20	-0.9
2,383,712	+		ABIE53_002128	0.20	-0.4
2,383,712	+		ABIE53_002128	0.20	+0.5
2,383,713	-		ABIE53_002128	0.20	-0.5
2,383,713	-		ABIE53_002128	0.20	+0.0
2,383,713	-		ABIE53_002128	0.20	+0.3
2,383,713	-		ABIE53_002128	0.20	-0.6
2,383,915	+		ABIE53_002128	0.35	+2.1
2,383,915	+		ABIE53_002128	0.35	-0.4
2,383,915	+		ABIE53_002128	0.35	+0.4
2,383,916	-		ABIE53_002128	0.35	-1.0
2,383,916	-		ABIE53_002128	0.35	+0.2
2,383,916	-		ABIE53_002128	0.35	-0.7
2,383,916	-		ABIE53_002128	0.35	+0.1
2,383,916	-		ABIE53_002128	0.35	-2.5
2,383,916	-		ABIE53_002128	0.35	-0.3
2,383,916	-		ABIE53_002128	0.35	+0.6
2,383,916	-		ABIE53_002128	0.35	+0.3
2,384,043	-		ABIE53_002128	0.44	-1.5
2,384,086	+		ABIE53_002128	0.47	-0.2
2,384,087	-		ABIE53_002128	0.47	-1.5
2,384,516	+		ABIE53_002128	0.79	+0.6
2,384,517	-		ABIE53_002128	0.79	-1.6
2,385,321	+		ABIE53_002129	0.59	-0.7
2,385,321	+		ABIE53_002129	0.59	-1.9
2,385,582	-		ABIE53_002129	0.89	-1.7
2,385,582	-		ABIE53_002129	0.89	+2.7
2,385,582	-		ABIE53_002129	0.89	-1.6
2,385,620	+				-0.2
2,385,685	+				-0.9
2,385,711	+				-0.3
2,385,711	+				-0.5
2,385,711	+				+0.3
2,385,712	-				+0.5
2,385,712	-				-2.3
2,385,774	+				-0.7
2,385,774	+				-0.7
2,385,774	+				+0.5
2,385,774	+				+0.8
2,385,774	+				-0.7
2,385,775	-				+0.2