Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001147

Experiment: M9 with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Propan-1-ol 13 g/L
1,270,336	+		ABIE53_001146	0.36	+2.0
1,270,337	-		ABIE53_001146	0.36	-0.0
1,270,337	-		ABIE53_001146	0.36	-1.4
1,270,542	+		ABIE53_001146	0.51	-1.5
1,270,542	+		ABIE53_001146	0.51	-2.4
1,270,604	-		ABIE53_001146	0.56	+0.1
1,270,604	-		ABIE53_001146	0.56	-1.5
1,270,618	+		ABIE53_001146	0.57	+0.6
1,270,619	-		ABIE53_001146	0.57	-2.9
1,270,619	-		ABIE53_001146	0.57	-0.9
1,270,788	+		ABIE53_001146	0.69	-1.6
1,270,965	+		ABIE53_001146	0.82	-0.2
1,270,998	+		ABIE53_001146	0.84	-0.4
1,270,999	-		ABIE53_001146	0.84	+0.1
1,270,999	-		ABIE53_001146	0.84	-0.2
1,271,092	+				-1.7
1,271,092	+				+0.5
1,271,092	+				+1.9
1,271,092	+				+0.1
1,271,093	-				-0.7
1,271,093	-				-1.0
1,271,093	-				+0.5
1,271,093	-				-1.1
1,271,093	-				+1.1
1,271,226	+				-1.3
1,271,226	+				-1.7
1,271,227	-				-1.9
1,271,269	+				+0.1
1,271,270	-				-0.7
1,271,298	+				-0.6
1,271,298	+				+0.0
1,271,298	+				-0.3
1,271,298	+				-1.7
1,271,299	-				-3.1
1,271,299	-				+0.0
1,271,299	-				+0.2
1,271,299	-				-1.0
1,271,311	-				-1.5
1,271,327	+				-0.3
1,271,327	+				+0.8
1,271,327	+				+0.9
1,271,328	-				-0.9
1,271,328	-				-1.3
1,271,328	-				+0.6
1,271,342	+				-1.1
1,271,343	-				-1.5
1,271,343	-				+2.3
1,271,343	-				-2.3
1,271,385	-				-0.7
1,271,397	+				-1.0
1,271,398	-				-0.3
1,271,398	-				-1.8
1,271,398	-				-2.9
1,271,398	-				-1.7
1,271,420	+				-0.1
1,271,420	+				-1.2
1,271,420	+				+0.8
1,271,420	+				+0.9
1,271,420	+				-0.8
1,271,420	+				+1.0
1,271,420	+				-0.0
1,271,420	+				-0.6
1,271,421	-				+0.2
1,271,421	-				+1.6
1,271,421	-				-1.5
1,271,436	+				+0.5
1,271,436	+				-0.8
1,271,436	+				+1.5
1,271,436	+				-0.3
1,271,436	+				+0.6
1,271,436	+				-1.6
1,271,436	+				-0.6
1,271,436	+				-0.2
1,271,436	+				+1.3
1,271,437	-				-1.2
1,271,437	-				-3.3
1,271,437	-				-1.4
1,271,437	-				-1.4
1,271,437	-				+0.5
1,271,445	+				+0.8
1,271,445	+				+0.3
1,271,445	+				-1.2
1,271,445	+				-0.6
1,271,445	+				+0.3
1,271,446	-				-0.5
1,271,446	-				-3.4
1,271,446	-				+0.4
1,271,446	-				+0.8
1,271,596	-				-1.1
1,271,767	+		ABIE53_001147	0.13	-1.1
1,271,767	+		ABIE53_001147	0.13	-0.7
1,271,767	+		ABIE53_001147	0.13	-2.1
1,271,767	+		ABIE53_001147	0.13	-1.4
1,271,768	-		ABIE53_001147	0.13	-1.0
1,271,768	-		ABIE53_001147	0.13	+1.3
1,271,768	-		ABIE53_001147	0.13	+0.2
1,271,790	+		ABIE53_001147	0.14	-1.7
1,271,790	+		ABIE53_001147	0.14	-1.5
1,271,820	+		ABIE53_001147	0.15	-0.9
1,271,820	+		ABIE53_001147	0.15	-1.7
1,271,820	+		ABIE53_001147	0.15	-1.0
1,271,820	+		ABIE53_001147	0.15	+2.7
1,271,820	+		ABIE53_001147	0.15	-0.8
1,271,820	+		ABIE53_001147	0.15	-1.4
1,271,820	+		ABIE53_001147	0.15	-1.1
1,271,820	+		ABIE53_001147	0.15	-0.8
1,271,820	+		ABIE53_001147	0.15	-1.5
1,271,820	+		ABIE53_001147	0.15	+0.9
1,271,820	+		ABIE53_001147	0.15	-0.6
1,271,820	+		ABIE53_001147	0.15	-0.6
1,271,821	-		ABIE53_001147	0.15	-0.7
1,271,821	-		ABIE53_001147	0.15	-0.4
1,271,821	-		ABIE53_001147	0.15	+0.5
1,271,892	+		ABIE53_001147	0.17	-1.8
1,271,893	-		ABIE53_001147	0.17	-2.7
1,271,961	+		ABIE53_001147	0.19	-0.2
1,271,961	+		ABIE53_001147	0.19	-0.6
1,271,961	+		ABIE53_001147	0.19	-1.5
1,271,962	-		ABIE53_001147	0.19	+1.1
1,271,980	+		ABIE53_001147	0.19	-0.7
1,271,980	+		ABIE53_001147	0.19	-0.9
1,271,980	+		ABIE53_001147	0.19	-1.4
1,271,981	-		ABIE53_001147	0.20	+2.2
1,271,981	-		ABIE53_001147	0.20	+0.2
1,271,981	-		ABIE53_001147	0.20	+0.5
1,271,988	+		ABIE53_001147	0.20	+0.6
1,271,989	-		ABIE53_001147	0.20	+0.6
1,272,022	-		ABIE53_001147	0.21	+1.3
1,272,102	+		ABIE53_001147	0.23	-1.3
1,272,103	-		ABIE53_001147	0.23	+0.3
1,272,214	+		ABIE53_001147	0.26	-1.1
1,272,214	+		ABIE53_001147	0.26	+0.2
1,272,214	+		ABIE53_001147	0.26	-0.3
1,272,215	-		ABIE53_001147	0.26	-2.4
1,272,215	-		ABIE53_001147	0.26	+0.2
1,272,215	-		ABIE53_001147	0.26	-3.9
1,272,263	+		ABIE53_001147	0.28	+0.1
1,272,264	-		ABIE53_001147	0.28	-0.8
1,272,264	-		ABIE53_001147	0.28	+0.6
1,272,264	-		ABIE53_001147	0.28	-1.3
1,272,296	+		ABIE53_001147	0.29	+1.8
1,272,297	-		ABIE53_001147	0.29	-1.9
1,272,297	-		ABIE53_001147	0.29	-2.0
1,272,297	-		ABIE53_001147	0.29	+0.3
1,272,402	+		ABIE53_001147	0.32	-1.0
1,272,402	+		ABIE53_001147	0.32	-0.5
1,272,402	+		ABIE53_001147	0.32	-1.9
1,272,402	+		ABIE53_001147	0.32	-3.6
1,272,402	+		ABIE53_001147	0.32	-0.9
1,272,402	+		ABIE53_001147	0.32	+1.3
1,272,403	-		ABIE53_001147	0.32	+0.8
1,272,403	-		ABIE53_001147	0.32	-2.2
1,272,524	+		ABIE53_001147	0.36	+0.5
1,272,524	+		ABIE53_001147	0.36	+0.2
1,272,525	-		ABIE53_001147	0.36	+0.9
1,272,525	-		ABIE53_001147	0.36	-2.0
1,272,525	-		ABIE53_001147	0.36	-0.2
1,272,576	-		ABIE53_001147	0.37	-0.2
1,272,737	+		ABIE53_001147	0.42	+0.8
1,272,830	+		ABIE53_001147	0.45	-1.3
1,272,831	-		ABIE53_001147	0.45	+2.2
1,272,831	-		ABIE53_001147	0.45	-1.2
1,272,831	-		ABIE53_001147	0.45	-1.2
1,272,846	+		ABIE53_001147	0.45	+0.1
1,272,846	+		ABIE53_001147	0.45	-1.4
1,272,894	+		ABIE53_001147	0.47	-0.1
1,272,894	+		ABIE53_001147	0.47	+1.6
1,272,895	-		ABIE53_001147	0.47	-0.5
1,272,895	-		ABIE53_001147	0.47	-3.3
1,272,895	-		ABIE53_001147	0.47	-1.6
1,273,596	+		ABIE53_001147	0.68	-1.7
1,273,596	+		ABIE53_001147	0.68	-2.5
1,273,596	+		ABIE53_001147	0.68	+0.3
1,273,597	-		ABIE53_001147	0.68	-0.7
1,273,597	-		ABIE53_001147	0.68	-0.8
1,273,710	+		ABIE53_001147	0.71	+0.1
1,273,711	-		ABIE53_001147	0.71	-1.5
1,273,745	-		ABIE53_001147	0.72	+0.8
1,273,849	+		ABIE53_001147	0.75	-1.2
1,273,849	+		ABIE53_001147	0.75	-0.2
1,273,849	+		ABIE53_001147	0.75	-0.8
1,273,872	+		ABIE53_001147	0.76	-1.0
1,273,926	+		ABIE53_001147	0.78	-1.8
1,273,926	+		ABIE53_001147	0.78	-1.0
1,273,927	-		ABIE53_001147	0.78	-1.7
1,274,141	+		ABIE53_001147	0.84	-0.3
1,274,407	+				+0.9
1,274,506	+				-2.0
1,274,507	-				-0.8
1,274,571	+				+2.9
1,274,572	-				-0.5
1,274,654	+				-0.4
1,274,655	-				+0.8
1,274,684	-				+2.5
1,274,709	+				-0.6
1,274,709	+				+0.8
1,274,710	-				-0.5
1,274,721	+				-4.2
1,274,721	+				-1.4
1,274,722	-				-0.3
1,274,722	-				+0.8
1,274,771	+				-1.7
1,274,771	+				+0.0
1,274,771	+				+0.8
1,274,771	+				-0.9
1,274,771	+				-2.5
1,274,772	-				+3.9
1,274,772	-				+0.1
1,274,772	-				+3.9
1,274,772	-				-0.2
1,274,772	-				+2.9
1,274,772	-				+1.1
1,274,840	+		ABIE53_001148	0.11	-0.5
1,274,841	-		ABIE53_001148	0.11	+1.3
1,274,841	-		ABIE53_001148	0.11	+1.6
1,275,085	+		ABIE53_001148	0.30	+0.1
1,275,085	+		ABIE53_001148	0.30	-0.1
1,275,086	-		ABIE53_001148	0.31	+2.9
1,275,086	-		ABIE53_001148	0.31	+0.8
1,275,086	-		ABIE53_001148	0.31	+1.6
1,275,136	+		ABIE53_001148	0.35	+1.6
1,275,148	+		ABIE53_001148	0.36	-2.8
1,275,148	+		ABIE53_001148	0.36	+1.2
1,275,148	+		ABIE53_001148	0.36	+0.2
1,275,148	+		ABIE53_001148	0.36	+0.2
1,275,149	-		ABIE53_001148	0.36	+1.9
1,275,149	-		ABIE53_001148	0.36	+0.8
1,275,316	+		ABIE53_001148	0.49	-1.6
1,275,316	+		ABIE53_001148	0.49	+1.1
1,275,316	+		ABIE53_001148	0.49	+1.1
1,275,316	+		ABIE53_001148	0.49	-0.8
1,275,316	+		ABIE53_001148	0.49	-3.3
1,275,317	-		ABIE53_001148	0.49	-0.0
1,275,340	+		ABIE53_001148	0.51	+0.9
1,275,340	+		ABIE53_001148	0.51	-1.4
1,275,341	-		ABIE53_001148	0.51	-0.1
1,275,341	-		ABIE53_001148	0.51	+1.9
1,275,361	+		ABIE53_001148	0.53	+0.3
1,275,361	+		ABIE53_001148	0.53	-1.3
1,275,361	+		ABIE53_001148	0.53	+1.0
1,275,361	+		ABIE53_001148	0.53	+0.2
1,275,361	+		ABIE53_001148	0.53	-0.4
1,275,361	+		ABIE53_001148	0.53	+0.1
1,275,362	-		ABIE53_001148	0.53	+1.6
1,275,362	-		ABIE53_001148	0.53	+0.6
1,275,362	-		ABIE53_001148	0.53	+3.9
1,275,362	-		ABIE53_001148	0.53	+2.3
1,275,416	+		ABIE53_001148	0.57	-0.5
1,275,416	+		ABIE53_001148	0.57	+0.6
1,275,416	+		ABIE53_001148	0.57	+1.1
1,275,417	-		ABIE53_001148	0.57	-1.8
1,275,469	+		ABIE53_001148	0.62	+1.1
1,275,469	+		ABIE53_001148	0.62	+0.2
1,275,469	+		ABIE53_001148	0.62	+0.0
1,275,470	-		ABIE53_001148	0.62	+2.9
1,275,470	-		ABIE53_001148	0.62	+0.3
1,275,470	-		ABIE53_001148	0.62	+0.9
1,275,470	-		ABIE53_001148	0.62	+1.6
1,275,498	+		ABIE53_001148	0.64	+0.2
1,275,498	+		ABIE53_001148	0.64	+0.9
1,275,498	+		ABIE53_001148	0.64	+0.9
1,275,498	+		ABIE53_001148	0.64	-0.6
1,275,515	-		ABIE53_001148	0.65	+0.9
1,275,515	-		ABIE53_001148	0.65	+1.9
1,275,515	-		ABIE53_001148	0.65	+1.9
1,275,573	+		ABIE53_001148	0.70	-0.9