Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006421

Experiment: R2A with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Propan-1-ol 13 g/L
2,798,792	+				+0.1
2,798,792	+				-1.0
2,798,793	-				+0.7
2,798,793	-				+0.3
2,798,793	-				+0.3
2,798,793	-				+0.4
2,798,793	-				-0.2
2,798,856	+				+0.2
2,798,856	+				-0.1
2,798,856	+				-2.7
2,798,856	+				+0.5
2,798,856	+				-0.3
2,798,856	+				-0.7
2,798,856	+				+1.4
2,798,857	-				-2.1
2,798,857	-				-1.5
2,798,857	-				-1.9
2,798,857	-				+0.8
2,798,857	-				-0.3
2,798,857	-				+1.5
2,798,895	+				-0.1
2,798,895	+				+1.2
2,798,896	-				+0.1
2,798,896	-				-0.6
2,798,896	-				+0.2
2,798,896	-				-0.1
2,798,948	+				-1.3
2,798,949	-				+0.5
2,798,949	-				-0.5
2,798,949	-				+0.0
2,798,949	-				-0.7
2,798,949	-				+0.6
2,799,081	-				+1.7
2,799,085	+				+0.3
2,799,085	+				+0.3
2,799,086	-				+0.1
2,799,118	+				+1.0
2,799,119	-				-1.0
2,799,119	-				+0.3
2,799,189	-		ABIE53_006420	0.13	+0.2
2,799,505	+				-1.1
2,799,505	+				-0.4
2,799,505	+				+1.1
2,799,506	-				+2.2
2,799,506	-				+1.0
2,799,506	-				+2.7
2,799,506	-				-0.4
2,799,506	-				-0.5
2,799,623	-				-1.0
2,799,779	+				+0.1
2,800,023	+		ABIE53_006421	0.30	-0.1
2,800,023	+		ABIE53_006421	0.30	-0.3
2,800,023	+		ABIE53_006421	0.30	+0.4
2,800,024	-		ABIE53_006421	0.30	+0.3
2,800,024	-		ABIE53_006421	0.30	-1.2
2,800,024	-		ABIE53_006421	0.30	+0.4
2,800,024	-		ABIE53_006421	0.30	+1.9
2,800,024	-		ABIE53_006421	0.30	+0.3
2,800,024	-		ABIE53_006421	0.30	-0.3
2,800,024	-		ABIE53_006421	0.30	-0.2
2,800,024	-		ABIE53_006421	0.30	-0.6
2,800,024	-		ABIE53_006421	0.30	+1.0
2,800,160	+		ABIE53_006421	0.42	-0.1
2,800,160	+		ABIE53_006421	0.42	-0.6
2,800,160	+		ABIE53_006421	0.42	-0.1
2,800,160	+		ABIE53_006421	0.42	-1.3
2,800,160	+		ABIE53_006421	0.42	+0.7
2,800,160	+		ABIE53_006421	0.42	-0.8
2,800,161	-		ABIE53_006421	0.42	+0.1
2,800,161	-		ABIE53_006421	0.42	-1.4
2,800,161	-		ABIE53_006421	0.42	+0.5
2,800,161	-		ABIE53_006421	0.42	-1.4
2,800,161	-		ABIE53_006421	0.42	+0.5
2,800,161	-		ABIE53_006421	0.42	-0.1
2,800,161	-		ABIE53_006421	0.42	-0.0
2,800,161	-		ABIE53_006421	0.42	+0.2
2,800,161	-		ABIE53_006421	0.42	+1.0
2,800,235	+		ABIE53_006421	0.49	-0.9
2,800,235	+		ABIE53_006421	0.49	+2.0
2,800,235	+		ABIE53_006421	0.49	-0.0
2,800,235	+		ABIE53_006421	0.49	-0.0
2,800,235	+		ABIE53_006421	0.49	+0.5
2,800,236	-		ABIE53_006421	0.49	-0.2
2,800,236	-		ABIE53_006421	0.49	-1.0
2,800,236	-		ABIE53_006421	0.49	-0.3
2,800,236	-		ABIE53_006421	0.49	-0.4
2,800,236	-		ABIE53_006421	0.49	-1.7
2,800,277	+		ABIE53_006421	0.53	-0.5
2,800,277	+		ABIE53_006421	0.53	-0.2
2,800,659	+		ABIE53_006421	0.88	+1.5
2,800,660	-		ABIE53_006421	0.89	+0.2
2,800,758	-				+1.8
2,800,768	-				+0.3
2,800,815	-				+2.4
2,800,815	-				-0.4
2,800,815	-				+1.8
2,800,895	+				-0.4
2,800,895	+				+0.5
2,800,895	+				-0.8
2,800,895	+				-1.2
2,800,895	+				+0.4
2,800,895	+				+0.5
2,800,895	+				+1.0
2,800,895	+				-0.2
2,800,896	-				-2.0
2,800,898	+				+0.5
2,800,899	-				-0.4
2,800,923	+		ABIE53_006422	0.12	-0.7
2,800,954	+		ABIE53_006422	0.16	+0.6
2,800,954	+		ABIE53_006422	0.16	-0.3
2,800,954	+		ABIE53_006422	0.16	+2.4
2,800,955	-		ABIE53_006422	0.16	+0.0
2,801,151	+		ABIE53_006422	0.38	-0.7
2,801,152	-		ABIE53_006422	0.38	-0.4
2,801,152	-		ABIE53_006422	0.38	+0.0
2,801,152	-		ABIE53_006422	0.38	-2.0
2,801,152	-		ABIE53_006422	0.38	-1.0
2,801,221	+		ABIE53_006422	0.46	-0.1
2,801,221	+		ABIE53_006422	0.46	-0.7
2,801,221	+		ABIE53_006422	0.46	-0.0
2,801,222	-		ABIE53_006422	0.46	-1.1
2,801,276	+		ABIE53_006422	0.52	+0.4
2,801,276	+		ABIE53_006422	0.52	+1.6
2,801,276	+		ABIE53_006422	0.52	-1.3
2,801,276	+		ABIE53_006422	0.52	+0.2
2,801,277	-		ABIE53_006422	0.52	-0.6
2,801,277	-		ABIE53_006422	0.52	-0.4
2,801,277	-		ABIE53_006422	0.52	-0.1
2,801,567	+		ABIE53_006422	0.84	-0.5
2,801,567	+		ABIE53_006422	0.84	-0.4
2,801,567	+		ABIE53_006422	0.84	+0.2
2,801,567	+		ABIE53_006422	0.84	+1.6
2,801,567	+		ABIE53_006422	0.84	+1.8
2,801,567	+		ABIE53_006422	0.84	+0.2
2,801,567	+		ABIE53_006422	0.84	+0.3
2,801,567	+		ABIE53_006422	0.84	-1.5
2,801,568	-		ABIE53_006422	0.84	-0.4
2,801,568	-		ABIE53_006422	0.84	+0.8
2,801,568	-		ABIE53_006422	0.84	+0.9
2,801,568	-		ABIE53_006422	0.84	+2.8
2,801,568	-		ABIE53_006422	0.84	-1.0
2,801,568	-		ABIE53_006422	0.84	+0.3
2,801,568	-		ABIE53_006422	0.84	-0.0
2,801,570	+		ABIE53_006422	0.85	-1.1
2,801,570	+		ABIE53_006422	0.85	-1.2
2,801,570	+		ABIE53_006422	0.85	-1.1
2,801,571	-		ABIE53_006422	0.85	-0.2
2,801,571	-		ABIE53_006422	0.85	+2.4
2,801,571	-		ABIE53_006422	0.85	-1.0
2,801,571	-		ABIE53_006422	0.85	+0.4
2,801,713	-				-1.0