Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005348

Experiment: R2A with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Propan-1-ol 13 g/L
1,612,236	+		ABIE53_005347	0.53	+0.7
1,612,258	+		ABIE53_005347	0.55	-0.6
1,612,348	+		ABIE53_005347	0.61	+2.2
1,612,348	+		ABIE53_005347	0.61	-0.7
1,612,349	-		ABIE53_005347	0.61	+1.7
1,612,349	-		ABIE53_005347	0.61	+1.5
1,612,349	-		ABIE53_005347	0.61	-0.6
1,612,480	+		ABIE53_005347	0.70	+1.2
1,612,778	-				+0.9
1,612,852	-				+0.5
1,612,852	-				+2.5
1,612,873	+				+2.4
1,612,920	-				+0.6
1,612,948	+				+0.8
1,612,949	-				+0.3
1,613,219	+		ABIE53_005348	0.31	-0.2
1,613,220	-		ABIE53_005348	0.31	+0.9
1,613,220	-		ABIE53_005348	0.31	+0.9
1,613,221	+		ABIE53_005348	0.32	+0.4
1,613,221	+		ABIE53_005348	0.32	-0.8
1,613,228	+		ABIE53_005348	0.32	+1.2
1,613,235	-		ABIE53_005348	0.33	-0.2
1,613,407	+		ABIE53_005348	0.51	+0.4
1,613,450	+		ABIE53_005348	0.56	+1.0
1,613,453	-		ABIE53_005348	0.56	+1.5
1,613,522	+		ABIE53_005348	0.64	+0.7
1,613,522	+		ABIE53_005348	0.64	+1.6
1,613,522	+		ABIE53_005348	0.64	+1.2
1,613,522	+		ABIE53_005348	0.64	-0.4
1,613,541	-		ABIE53_005348	0.66	-1.4
1,613,586	-		ABIE53_005348	0.70	+1.3
1,613,658	-		ABIE53_005348	0.78	+1.5
1,613,777	-				+1.3
1,613,952	-				-0.2
1,614,045	+				+0.4
1,614,262	+		ABIE53_005349	0.16	-0.6
1,614,314	+		ABIE53_005349	0.17	+0.2
1,614,314	+		ABIE53_005349	0.17	-0.9
1,614,315	-		ABIE53_005349	0.17	-0.2
1,614,607	+		ABIE53_005349	0.28	+2.1
1,614,619	-		ABIE53_005349	0.28	-0.2
1,614,695	-		ABIE53_005349	0.31	+1.7
1,614,695	-		ABIE53_005349	0.31	+1.0
1,614,695	-		ABIE53_005349	0.31	-1.4