Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002107

Experiment: R2A with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Propan-1-ol 13 g/L
2,359,620	+				+0.2
2,359,620	+				+0.2
2,359,620	+				-1.4
2,359,620	+				-0.3
2,359,620	+				-1.1
2,359,620	+				-1.7
2,359,620	+				-1.0
2,359,620	+				-2.3
2,359,620	+				+0.0
2,359,620	+				-0.4
2,359,620	+				-0.4
2,359,620	+				-1.7
2,359,620	+				-0.4
2,359,620	+				-0.1
2,359,620	+				+0.3
2,359,620	+				-2.0
2,359,620	+				-0.2
2,359,620	+				-0.4
2,359,620	+				-0.3
2,359,620	+				+0.1
2,359,621	-				+0.9
2,359,621	-				+0.7
2,359,621	-				-0.2
2,359,621	-				+2.9
2,359,621	-				+0.8
2,359,621	-				-0.1
2,359,621	-				+1.7
2,359,621	-				+0.9
2,359,621	-				+2.1
2,359,665	+				+0.4
2,359,665	+				-0.2
2,359,665	+				-2.0
2,359,667	+				-0.6
2,359,667	+				-0.5
2,359,667	+				+0.5
2,359,667	+				-1.8
2,359,667	+				-0.4
2,359,667	+				-0.3
2,359,668	-				+0.1
2,359,668	-				+1.5
2,359,668	-				-0.4
2,359,668	-				+0.7
2,359,668	-				+0.0
2,359,668	-				+1.9
2,359,668	-				-1.3
2,359,668	-				+1.9
2,359,668	-				+0.0
2,359,668	-				-0.3
2,359,691	+				-0.3
2,359,691	+				+0.9
2,359,691	+				-0.5
2,359,691	+				+0.0
2,359,691	+				+1.0
2,359,691	+				-0.1
2,359,691	+				-0.6
2,359,692	-				-1.1
2,359,692	-				-0.3
2,359,698	+				-0.8
2,359,698	+				-1.6
2,359,699	-				-1.6
2,359,721	+				-0.4
2,359,721	+				-0.0
2,359,721	+				+1.6
2,359,721	+				-0.1
2,359,721	+				-0.4
2,359,722	-				+0.2
2,359,722	-				-0.7
2,359,737	-				-0.1
2,359,827	+		ABIE53_002105	0.38	-1.2
2,359,827	+		ABIE53_002105	0.38	-0.1
2,359,828	-		ABIE53_002105	0.39	-0.7
2,359,828	-		ABIE53_002105	0.39	+0.1
2,359,958	-				-0.2
2,359,970	+				-1.1
2,359,970	+				+0.3
2,359,971	-				+0.4
2,359,971	-				-0.5
2,359,971	-				+0.3
2,359,971	-				+1.9
2,360,110	+		ABIE53_002106	0.44	-0.3
2,360,111	-		ABIE53_002106	0.45	-0.2
2,360,205	+		ABIE53_002106	0.86	+0.2
2,360,205	+		ABIE53_002106	0.86	-0.5
2,360,205	+		ABIE53_002106	0.86	+1.0
2,360,206	-		ABIE53_002106	0.86	+0.8
2,360,206	-		ABIE53_002106	0.86	-1.3
2,360,206	-		ABIE53_002106	0.86	+0.4
2,360,206	-		ABIE53_002106	0.86	-1.1
2,360,206	-		ABIE53_002106	0.86	+1.9
2,360,227	+				-0.9
2,360,277	+				-1.6
2,360,277	+				-0.4
2,360,556	-				-1.4
2,360,556	-				+0.6
2,360,788	+		ABIE53_002107	0.71	+0.8
2,360,887	+				+0.1
2,360,887	+				+0.8
2,360,887	+				-0.8
2,360,887	+				+0.3
2,360,887	+				-0.0
2,360,887	+				-0.5
2,360,887	+				-0.5
2,360,887	+				-1.5
2,360,887	+				+1.4
2,360,888	-				-1.2
2,360,888	-				-0.8
2,360,888	-				-0.1
2,360,888	-				+0.2
2,360,888	-				+0.2
2,360,888	-				+1.5
2,361,059	-				-0.2
2,361,059	-				+1.8
2,361,115	+				+0.5
2,361,120	-				-0.4
2,361,144	-				-0.3
2,361,226	+				-0.2
2,361,226	+				+0.0
2,361,227	-				+3.5
2,361,227	-				+0.1
2,361,227	-				+0.5
2,361,236	+				-0.5
2,361,237	-				+0.5
2,361,278	-				+1.5
2,361,278	-				+0.6
2,361,278	-				+0.3
2,361,314	+				-0.2
2,361,315	-				-0.7
2,361,325	-				-0.9
2,361,325	-				-1.4
2,361,375	+				-0.2
2,361,376	-				-0.0
2,361,376	-				-0.1
2,361,376	-				+0.9
2,361,376	-				-0.2
2,361,376	-				-0.2
2,361,400	+				-0.0
2,361,400	+				+1.1
2,361,400	+				+0.5
2,361,400	+				+0.6
2,361,401	-				-0.3
2,361,401	-				-0.4
2,361,777	+		ABIE53_002108	0.11	+0.7
2,361,777	+		ABIE53_002108	0.11	-0.2
2,361,777	+		ABIE53_002108	0.11	+1.7
2,361,778	-		ABIE53_002108	0.11	+0.2