Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002663

Experiment: R2A with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Propan-1-ol 13 g/L
3,000,710	+		ABIE53_002662	0.42	+1.0
3,000,711	-		ABIE53_002662	0.42	-0.2
3,000,714	+		ABIE53_002662	0.42	-2.7
3,000,745	-		ABIE53_002662	0.44	-0.8
3,000,858	+		ABIE53_002662	0.53	+1.0
3,000,909	+		ABIE53_002662	0.57	+0.1
3,000,909	+		ABIE53_002662	0.57	+0.9
3,000,945	+		ABIE53_002662	0.60	-0.5
3,000,945	+		ABIE53_002662	0.60	-0.7
3,000,945	+		ABIE53_002662	0.60	-0.4
3,000,946	-		ABIE53_002662	0.60	-1.2
3,000,946	-		ABIE53_002662	0.60	+0.4
3,001,634	+		ABIE53_002663	0.15	-1.0
3,001,824	-		ABIE53_002663	0.32	-1.0
3,001,824	-		ABIE53_002663	0.32	+1.0
3,001,885	-		ABIE53_002663	0.38	-0.5
3,002,047	+		ABIE53_002663	0.52	-0.5
3,002,051	+		ABIE53_002663	0.53	-1.9
3,002,052	-		ABIE53_002663	0.53	-0.5
3,002,052	-		ABIE53_002663	0.53	-0.6
3,002,148	+		ABIE53_002663	0.62	-2.0
3,002,149	-		ABIE53_002663	0.62	-0.7
3,002,234	+		ABIE53_002663	0.70	-0.7
3,002,234	+		ABIE53_002663	0.70	-2.3
3,002,235	-		ABIE53_002663	0.70	-1.4
3,002,235	-		ABIE53_002663	0.70	-1.6
3,002,267	+		ABIE53_002663	0.73	-0.8
3,002,535	+				-0.9
3,002,536	-				-1.4
3,002,571	+				+1.1
3,002,703	+				-0.9
3,002,704	-				-0.2
3,002,908	+		ABIE53_002664	0.22	-0.2
3,002,908	+		ABIE53_002664	0.22	-0.2
3,002,909	-		ABIE53_002664	0.22	+0.7
3,002,935	-		ABIE53_002664	0.23	-0.3
3,002,935	-		ABIE53_002664	0.23	+0.1
3,003,025	-		ABIE53_002664	0.29	-1.0
3,003,204	+		ABIE53_002664	0.40	+0.0
3,003,205	-		ABIE53_002664	0.40	-0.8
3,003,292	-		ABIE53_002664	0.46	-1.4
3,003,408	+		ABIE53_002664	0.53	-0.1
3,003,408	+		ABIE53_002664	0.53	-0.1
3,003,409	-		ABIE53_002664	0.53	-0.3
3,003,409	-		ABIE53_002664	0.53	-2.0
3,003,409	-		ABIE53_002664	0.53	-1.8