Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002531

Experiment: R2A with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Propan-1-ol 13 g/L
2,853,434	-		ABIE53_002530	0.21	-0.2
2,853,595	+		ABIE53_002530	0.38	-1.1
2,853,596	-		ABIE53_002530	0.38	-0.1
2,853,745	+		ABIE53_002530	0.53	-0.5
2,853,745	+		ABIE53_002530	0.53	-0.2
2,853,745	+		ABIE53_002530	0.53	+0.3
2,853,745	+		ABIE53_002530	0.53	+1.6
2,853,746	-		ABIE53_002530	0.53	-1.1
2,853,746	-		ABIE53_002530	0.53	-0.6
2,853,746	-		ABIE53_002530	0.53	-0.3
2,853,746	-		ABIE53_002530	0.53	+0.8
2,853,746	-		ABIE53_002530	0.53	-0.8
2,853,746	-		ABIE53_002530	0.53	-1.2
2,853,746	-		ABIE53_002530	0.53	+0.1
2,853,753	+		ABIE53_002530	0.54	+0.2
2,853,753	+		ABIE53_002530	0.54	-0.1
2,853,796	+		ABIE53_002530	0.59	+0.6
2,853,796	+		ABIE53_002530	0.59	-0.1
2,853,796	+		ABIE53_002530	0.59	+0.1
2,853,796	+		ABIE53_002530	0.59	-0.6
2,853,796	+		ABIE53_002530	0.59	-0.7
2,853,796	+		ABIE53_002530	0.59	+1.3
2,853,796	+		ABIE53_002530	0.59	-0.1
2,853,797	-		ABIE53_002530	0.59	-0.1
2,853,797	-		ABIE53_002530	0.59	-1.0
2,853,797	-		ABIE53_002530	0.59	+0.4
2,853,797	-		ABIE53_002530	0.59	-0.5
2,853,797	-		ABIE53_002530	0.59	-1.6
2,853,797	-		ABIE53_002530	0.59	-2.8
2,853,797	-		ABIE53_002530	0.59	-1.5
2,853,797	-		ABIE53_002530	0.59	-0.8
2,853,962	-		ABIE53_002530	0.76	+0.3
2,854,071	-		ABIE53_002530	0.87	-1.8
2,854,071	-		ABIE53_002530	0.87	-3.5
2,854,071	-		ABIE53_002530	0.87	-0.3
2,854,071	-		ABIE53_002530	0.87	-0.5
2,854,071	-		ABIE53_002530	0.87	-0.3
2,854,325	-				-2.6
2,854,325	-				-2.3
2,854,325	-				-3.6
2,855,473	-				+0.0
2,855,519	-		ABIE53_002532	0.17	-1.5
2,855,521	+		ABIE53_002532	0.17	-0.2
2,855,521	+		ABIE53_002532	0.17	+0.2
2,855,521	+		ABIE53_002532	0.17	-1.1
2,855,522	-		ABIE53_002532	0.17	-1.2
2,855,547	-		ABIE53_002532	0.22	-0.0
2,855,564	-		ABIE53_002532	0.26	+0.2
2,855,564	-		ABIE53_002532	0.26	-0.2
2,855,747	-		ABIE53_002532	0.63	-0.1
2,855,747	-		ABIE53_002532	0.63	-1.0
2,855,747	-		ABIE53_002532	0.63	-0.0
2,855,792	-		ABIE53_002532	0.72	-1.8
2,855,820	-		ABIE53_002532	0.78	-1.3
2,855,820	-		ABIE53_002532	0.78	+0.3
2,855,843	-		ABIE53_002532	0.82	+0.7
2,855,903	-				+0.7
2,855,903	-				-2.1
2,855,903	-				+0.1
2,855,903	-				-0.7
2,855,903	-				-0.8
2,855,903	-				-0.4
2,855,903	-				+0.4
2,855,903	-				-0.1
2,855,903	-				+0.6