Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003965

Experiment: R2A with Propan-1-ol 13 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Propan-1-ol 13 g/L
116,803	+				+0.1
116,804	-				-0.3
116,808	-				+0.5
116,814	-				+0.7
116,814	-				+0.8
116,814	-				-0.2
116,876	+		ABIE53_003964	0.13	-0.4
116,877	-		ABIE53_003964	0.13	-1.0
116,877	-		ABIE53_003964	0.13	-0.7
116,877	-		ABIE53_003964	0.13	+1.4
117,047	-		ABIE53_003964	0.52	+0.8
117,070	-		ABIE53_003964	0.58	-0.6
117,071	+		ABIE53_003964	0.58	-0.6
117,257	-				+1.8
117,349	+				+0.2
117,361	-				+0.5
117,610	+				+0.9
117,611	-				-1.9
117,662	+				+2.1
117,662	+				+2.3
117,662	+				+0.2
117,663	-				+0.8
117,663	-				-0.2
117,663	-				+1.4
117,962	+		ABIE53_003965	0.32	-1.7
117,963	-		ABIE53_003965	0.32	-1.3
118,073	+		ABIE53_003965	0.43	+0.5
118,074	-		ABIE53_003965	0.44	+0.2
118,244	+		ABIE53_003965	0.61	-0.3
118,244	+		ABIE53_003965	0.61	-1.9
118,930	+		ABIE53_003966	0.19	-1.5
119,155	+		ABIE53_003966	0.33	-0.8
119,155	+		ABIE53_003966	0.33	+0.2
119,241	+		ABIE53_003966	0.38	-1.9
119,242	-		ABIE53_003966	0.38	+2.3
119,325	+		ABIE53_003966	0.43	-1.7
119,338	+		ABIE53_003966	0.44	+0.1
119,339	-		ABIE53_003966	0.44	+0.2
119,378	-		ABIE53_003966	0.46	+0.2
119,378	-		ABIE53_003966	0.46	-0.9
119,378	-		ABIE53_003966	0.46	+0.9
119,438	+		ABIE53_003966	0.50	+1.7
119,610	+		ABIE53_003966	0.61	-0.5
119,611	-		ABIE53_003966	0.61	-1.3
119,611	-		ABIE53_003966	0.61	+1.9