Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001311

Experiment: M9 with Isopropyl alcohol 21 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Isopropyl alcohol 21 g/L
1,463,954	+				-0.4
1,463,954	+				-1.0
1,463,954	+				-0.1
1,463,955	-				-0.8
1,463,955	-				-0.2
1,463,955	-				-0.1
1,463,955	-				+2.2
1,463,955	-				-0.2
1,464,065	+				+0.1
1,464,065	+				+0.3
1,464,066	-				-0.1
1,464,066	-				-0.1
1,464,066	-				-0.4
1,464,133	+				+0.5
1,464,133	+				-0.1
1,464,385	+		ABIE53_001310	0.36	-0.4
1,464,385	+		ABIE53_001310	0.36	+0.8
1,464,385	+		ABIE53_001310	0.36	-0.2
1,464,386	-		ABIE53_001310	0.37	+0.5
1,464,386	-		ABIE53_001310	0.37	+0.8
1,464,481	+		ABIE53_001310	0.54	-0.5
1,464,481	+		ABIE53_001310	0.54	-0.6
1,464,481	+		ABIE53_001310	0.54	+0.4
1,464,481	+		ABIE53_001310	0.54	+1.0
1,464,481	+		ABIE53_001310	0.54	-0.8
1,464,482	-		ABIE53_001310	0.55	-0.5
1,464,482	-		ABIE53_001310	0.55	-0.2
1,464,482	-		ABIE53_001310	0.55	-0.5
1,464,482	-		ABIE53_001310	0.55	-0.8
1,464,482	-		ABIE53_001310	0.55	-0.8
1,464,482	-		ABIE53_001310	0.55	+0.0
1,464,482	-		ABIE53_001310	0.55	-0.7
1,464,482	-		ABIE53_001310	0.55	-1.0
1,464,482	-		ABIE53_001310	0.55	-0.2
1,464,763	+				-0.1
1,464,763	+				+0.6
1,464,764	-				-1.0
1,464,825	-				-0.1
1,464,906	+				-0.5
1,464,907	-				-1.2
1,466,326	-				+0.3
1,466,326	-				-0.7
1,466,326	-				+0.3
1,466,326	-				-0.7
1,466,326	-				+0.2
1,466,360	-				-0.1
1,466,360	-				-0.8
1,466,360	-				+0.9
1,466,360	-				-0.3
1,466,455	+				-1.0
1,466,456	-				+0.7
1,466,624	-				+0.8
1,466,866	+		ABIE53_001312	0.38	-1.3
1,466,866	+		ABIE53_001312	0.38	-0.1
1,466,866	+		ABIE53_001312	0.38	-0.3
1,466,866	+		ABIE53_001312	0.38	-2.5
1,466,867	-		ABIE53_001312	0.38	-1.7
1,466,968	+		ABIE53_001312	0.51	-0.4
1,466,968	+		ABIE53_001312	0.51	-0.0
1,466,968	+		ABIE53_001312	0.51	-3.3
1,466,969	-		ABIE53_001312	0.51	-0.0
1,466,969	-		ABIE53_001312	0.51	+0.1
1,466,969	-		ABIE53_001312	0.51	-0.8
1,467,076	+		ABIE53_001312	0.64	-1.4
1,467,076	+		ABIE53_001312	0.64	-2.4
1,467,076	+		ABIE53_001312	0.64	-1.4
1,467,076	+		ABIE53_001312	0.64	-0.9
1,467,077	-		ABIE53_001312	0.64	-1.1
1,467,077	-		ABIE53_001312	0.64	-2.1
1,467,172	+		ABIE53_001312	0.76	-1.0
1,467,172	+		ABIE53_001312	0.76	-0.2
1,467,172	+		ABIE53_001312	0.76	-1.1
1,467,172	+		ABIE53_001312	0.76	-2.4
1,467,173	-		ABIE53_001312	0.76	-0.2
1,467,173	-		ABIE53_001312	0.76	-1.4
1,467,173	-		ABIE53_001312	0.76	-1.1
1,467,173	-		ABIE53_001312	0.76	-1.2
1,467,297	-				-0.3
1,467,297	-				-2.6