Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002527

Experiment: R2A with Isopropyl alcohol 21 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Isopropyl alcohol 21 g/L
2,848,947	+		ABIE53_002526	0.48	+0.9
2,848,947	+		ABIE53_002526	0.48	+0.0
2,848,947	+		ABIE53_002526	0.48	-0.8
2,848,947	+		ABIE53_002526	0.48	-0.6
2,848,947	+		ABIE53_002526	0.48	-1.0
2,848,947	+		ABIE53_002526	0.48	-0.9
2,848,948	-		ABIE53_002526	0.48	-1.1
2,848,948	-		ABIE53_002526	0.48	-1.7
2,848,948	-		ABIE53_002526	0.48	-0.2
2,848,948	-		ABIE53_002526	0.48	-0.7
2,848,966	+		ABIE53_002526	0.49	-2.9
2,848,966	+		ABIE53_002526	0.49	+0.6
2,848,966	+		ABIE53_002526	0.49	+0.3
2,848,967	-		ABIE53_002526	0.49	-1.4
2,848,967	-		ABIE53_002526	0.49	-0.6
2,848,967	-		ABIE53_002526	0.49	+1.3
2,848,967	-		ABIE53_002526	0.49	-1.1
2,849,124	+		ABIE53_002526	0.61	-2.2
2,849,124	+		ABIE53_002526	0.61	+0.9
2,849,124	+		ABIE53_002526	0.61	-0.7
2,849,125	-		ABIE53_002526	0.61	-0.1
2,849,125	-		ABIE53_002526	0.61	-0.8
2,849,307	+		ABIE53_002526	0.74	-1.4
2,849,307	+		ABIE53_002526	0.74	-0.3
2,849,307	+		ABIE53_002526	0.74	+0.6
2,849,308	-		ABIE53_002526	0.74	-0.5
2,849,308	-		ABIE53_002526	0.74	-0.7
2,849,308	-		ABIE53_002526	0.74	+0.1
2,849,308	-		ABIE53_002526	0.74	+0.4
2,849,636	+				+0.2
2,849,636	+				-1.0
2,849,636	+				-0.3
2,849,636	+				-0.7
2,849,636	+				-0.8
2,849,636	+				-0.4
2,849,636	+				+0.0
2,849,636	+				-1.1
2,849,636	+				-0.3
2,849,636	+				-0.8
2,849,636	+				+1.2
2,849,636	+				+0.3
2,849,636	+				-0.7
2,849,637	-				-0.1
2,849,637	-				-0.1
2,849,637	-				-1.4
2,849,637	-				-0.5
2,849,637	-				+0.5
2,849,637	-				+0.1
2,849,637	-				-0.8
2,849,637	-				-0.6
2,849,637	-				-0.3
2,849,637	-				-2.3
2,849,637	-				-0.6
2,849,637	-				+0.8
2,849,637	-				-1.6
2,849,637	-				-1.1
2,849,640	+				-0.1
2,849,640	+				-0.3
2,849,640	+				-0.8
2,849,640	+				+0.8
2,849,640	+				-0.9
2,849,640	+				-0.9
2,849,640	+				+0.1
2,849,640	+				-0.4
2,849,640	+				-0.6
2,849,640	+				+1.5
2,849,640	+				-0.4
2,849,640	+				-1.1
2,849,640	+				-0.5
2,849,640	+				-0.5
2,849,640	+				-1.1
2,849,640	+				-1.3
2,849,640	+				+0.7
2,849,640	+				-0.2
2,849,640	+				+0.2
2,849,640	+				+0.6
2,849,641	-				-1.8
2,849,641	-				-0.5
2,849,641	-				+0.3
2,849,641	-				-1.3
2,849,641	-				-0.2
2,849,641	-				-1.0
2,849,641	-				-0.0
2,849,641	-				-0.3
2,849,641	-				-0.7
2,849,641	-				-1.0
2,849,641	-				+0.5
2,849,641	-				+0.7
2,849,641	-				-0.6
2,849,641	-				-0.4
2,849,641	-				-0.8
2,849,641	-				+0.7
2,849,641	-				-0.0
2,849,690	+				+0.3
2,849,690	+				-0.9
2,849,690	+				-0.1
2,849,690	+				+0.7
2,849,690	+				+3.4
2,849,691	-				-0.8
2,849,691	-				-1.1
2,849,691	-				-0.2
2,849,691	-				-1.8
2,849,691	-				-0.8
2,849,691	-				-0.4
2,849,691	-				-0.5
2,849,691	-				-0.4
2,849,691	-				-1.2
2,849,691	-				-0.9
2,849,721	+				+0.1
2,849,721	+				-0.7
2,849,721	+				-1.4
2,849,721	+				+1.0
2,849,722	-				+0.6
2,849,722	-				+0.3
2,849,722	-				+0.3
2,849,722	-				-0.8
2,849,722	-				+1.8
2,849,722	-				-0.1
2,850,834	-				-2.5
2,850,890	-				-0.8
2,850,890	-				-2.3
2,850,905	-				-2.4
2,850,905	-				-2.1
2,850,905	-				-1.9
2,850,915	+				+0.2
2,850,915	+				-0.2
2,850,915	+				-0.4
2,850,915	+				+0.7
2,850,917	+				+0.7
2,850,917	+				-0.0
2,850,917	+				-1.1
2,850,917	+				+0.9
2,850,917	+				-0.3
2,850,917	+				-1.5
2,850,917	+				-0.2
2,850,917	+				-0.5
2,850,917	+				-1.0
2,850,917	+				-0.5
2,850,917	+				+0.3
2,850,917	+				-0.7
2,850,917	+				+0.8
2,850,917	+				-0.1
2,850,950	+				-1.2
2,850,950	+				+0.6
2,850,950	+				-0.2
2,850,950	+				-0.4
2,850,964	+				-0.6
2,850,964	+				+0.5
2,850,964	+				-0.5
2,850,964	+				-0.1
2,850,964	+				-0.4
2,851,301	+		ABIE53_002528	0.21	-0.3
2,851,341	+		ABIE53_002528	0.23	+0.4
2,851,341	+		ABIE53_002528	0.23	+0.8
2,851,548	+		ABIE53_002528	0.38	+0.4
2,851,548	+		ABIE53_002528	0.38	-0.3