Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002052

Experiment: R2A with Isopropyl alcohol 21 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Isopropyl alcohol 21 g/L
2,300,144	+				-0.7
2,300,145	-				-0.4
2,300,145	-				+0.6
2,300,145	-				+0.9
2,300,145	-				-0.4
2,300,198	+				-0.7
2,300,198	+				+0.6
2,300,199	-				-0.0
2,300,199	-				-0.0
2,300,199	-				-0.0
2,300,199	-				-0.8
2,300,199	-				-0.3
2,300,199	-				-1.0
2,300,307	+				-1.0
2,300,307	+				-0.8
2,300,307	+				+1.6
2,300,307	+				+0.6
2,300,309	+				-0.5
2,300,309	+				-0.7
2,300,310	-				-0.6
2,300,310	-				-0.6
2,300,310	-				-0.2
2,300,446	+		ABIE53_002051	0.26	-0.7
2,300,446	+		ABIE53_002051	0.26	-0.5
2,300,447	-		ABIE53_002051	0.26	-0.4
2,300,487	+		ABIE53_002051	0.31	-2.3
2,300,487	+		ABIE53_002051	0.31	-2.4
2,300,487	+		ABIE53_002051	0.31	-0.3
2,300,488	-		ABIE53_002051	0.31	-2.8
2,300,488	-		ABIE53_002051	0.31	+0.6
2,300,488	-		ABIE53_002051	0.31	+0.4
2,300,488	-		ABIE53_002051	0.31	-0.4
2,300,488	-		ABIE53_002051	0.31	-0.5
2,300,488	-		ABIE53_002051	0.31	+1.4
2,300,488	-		ABIE53_002051	0.31	-0.9
2,300,488	-		ABIE53_002051	0.31	-0.4
2,300,782	+		ABIE53_002051	0.67	-0.4
2,300,782	+		ABIE53_002051	0.67	-1.2
2,300,782	+		ABIE53_002051	0.67	+0.7
2,300,782	+		ABIE53_002051	0.67	-1.4
2,300,782	+		ABIE53_002051	0.67	+0.4
2,300,783	-		ABIE53_002051	0.67	-0.0
2,300,783	-		ABIE53_002051	0.67	-0.4
2,300,783	-		ABIE53_002051	0.67	+0.7
2,300,783	-		ABIE53_002051	0.67	-0.9
2,300,783	-		ABIE53_002051	0.67	-0.7
2,301,013	+				-1.4
2,301,013	+				+0.7
2,301,013	+				-0.8
2,301,013	+				-0.8
2,301,013	+				+0.2
2,301,014	-				-0.1
2,301,014	-				+1.0
2,301,014	-				-2.6
2,301,014	-				+0.3
2,301,021	+				-0.4
2,301,022	-				-0.0
2,301,043	+				-0.6
2,301,043	+				-0.6
2,301,043	+				+0.6
2,301,043	+				+0.5
2,301,043	+				-1.3
2,301,043	+				-0.8
2,301,043	+				+0.5
2,301,044	-				-0.8
2,301,044	-				+0.4
2,301,044	-				+0.2
2,301,044	-				-0.5
2,301,044	-				-1.1
2,301,083	+				+0.8
2,301,083	+				-1.4
2,301,083	+				-0.8
2,301,083	+				-2.2
2,301,084	-				-0.1
2,301,084	-				+0.2
2,301,084	-				-0.3
2,301,089	+				+0.4
2,301,089	+				-0.5
2,301,089	+				-0.8
2,301,089	+				-1.4
2,301,089	+				+1.2
2,301,090	-				+0.2
2,301,207	+				+1.2
2,301,207	+				-0.8
2,301,207	+				-0.8
2,301,208	-				+0.5
2,301,244	-		ABIE53_002052	0.14	-0.8
2,301,336	+		ABIE53_002052	0.25	-0.8
2,301,336	+		ABIE53_002052	0.25	-1.0
2,301,336	+		ABIE53_002052	0.25	+0.5
2,301,336	+		ABIE53_002052	0.25	+1.7
2,301,336	+		ABIE53_002052	0.25	-1.3
2,301,336	+		ABIE53_002052	0.25	-0.5
2,301,336	+		ABIE53_002052	0.25	-0.3
2,301,336	+		ABIE53_002052	0.25	-0.5
2,301,336	+		ABIE53_002052	0.25	-0.4
2,301,336	+		ABIE53_002052	0.25	+0.0
2,301,336	+		ABIE53_002052	0.25	+0.4
2,301,336	+		ABIE53_002052	0.25	-1.6
2,301,336	+		ABIE53_002052	0.25	+2.2
2,301,336	+		ABIE53_002052	0.25	-0.5
2,301,336	+		ABIE53_002052	0.25	-1.5
2,301,336	+		ABIE53_002052	0.25	+1.9
2,301,337	-		ABIE53_002052	0.26	-0.7
2,301,337	-		ABIE53_002052	0.26	-1.0
2,301,337	-		ABIE53_002052	0.26	-0.2
2,301,337	-		ABIE53_002052	0.26	+1.3
2,301,337	-		ABIE53_002052	0.26	-0.5
2,301,337	-		ABIE53_002052	0.26	-0.8
2,301,337	-		ABIE53_002052	0.26	+0.0
2,301,337	-		ABIE53_002052	0.26	-0.4
2,301,337	-		ABIE53_002052	0.26	-0.6
2,301,337	-		ABIE53_002052	0.26	-1.2
2,301,416	-		ABIE53_002052	0.35	-0.2
2,301,416	-		ABIE53_002052	0.35	-0.3
2,301,416	-		ABIE53_002052	0.35	-0.5
2,301,416	-		ABIE53_002052	0.35	-0.9
2,301,416	-		ABIE53_002052	0.35	-1.3
2,301,459	+		ABIE53_002052	0.40	-0.1
2,301,459	+		ABIE53_002052	0.40	-0.9
2,301,459	+		ABIE53_002052	0.40	-0.6
2,301,459	+		ABIE53_002052	0.40	+0.1
2,301,459	+		ABIE53_002052	0.40	-0.5
2,301,459	+		ABIE53_002052	0.40	-0.4
2,301,459	+		ABIE53_002052	0.40	-0.8
2,301,459	+		ABIE53_002052	0.40	+0.0
2,301,459	+		ABIE53_002052	0.40	-0.4
2,301,460	-		ABIE53_002052	0.40	+0.4
2,301,460	-		ABIE53_002052	0.40	-0.8
2,301,460	-		ABIE53_002052	0.40	-0.6
2,301,460	-		ABIE53_002052	0.40	-0.5
2,301,460	-		ABIE53_002052	0.40	-0.2
2,301,460	-		ABIE53_002052	0.40	-0.3
2,301,460	-		ABIE53_002052	0.40	-1.8
2,301,591	+		ABIE53_002052	0.56	-0.5
2,301,591	+		ABIE53_002052	0.56	-0.4
2,301,591	+		ABIE53_002052	0.56	+1.2
2,301,591	+		ABIE53_002052	0.56	-0.6
2,301,592	-		ABIE53_002052	0.56	-0.0
2,301,672	+		ABIE53_002052	0.66	-0.3
2,301,672	+		ABIE53_002052	0.66	-0.2
2,301,672	+		ABIE53_002052	0.66	-0.7
2,301,672	+		ABIE53_002052	0.66	-0.2
2,301,672	+		ABIE53_002052	0.66	+0.3
2,301,672	+		ABIE53_002052	0.66	-0.7
2,301,672	+		ABIE53_002052	0.66	+0.2
2,301,672	+		ABIE53_002052	0.66	-0.6
2,301,672	+		ABIE53_002052	0.66	-0.8
2,301,672	+		ABIE53_002052	0.66	-0.3
2,301,672	+		ABIE53_002052	0.66	-0.7
2,301,672	+		ABIE53_002052	0.66	-1.2
2,301,673	-		ABIE53_002052	0.66	-0.1
2,301,673	-		ABIE53_002052	0.66	-0.4
2,301,673	-		ABIE53_002052	0.66	-0.3
2,301,673	-		ABIE53_002052	0.66	-1.2
2,301,673	-		ABIE53_002052	0.66	-0.9
2,301,673	-		ABIE53_002052	0.66	+0.8
2,301,678	+		ABIE53_002052	0.67	-0.9
2,301,678	+		ABIE53_002052	0.67	-0.4
2,301,678	+		ABIE53_002052	0.67	-0.8
2,301,678	+		ABIE53_002052	0.67	+0.2
2,301,678	+		ABIE53_002052	0.67	-0.7
2,301,679	-		ABIE53_002052	0.67	-0.2
2,301,679	-		ABIE53_002052	0.67	-0.4
2,301,762	+		ABIE53_002052	0.77	-1.0
2,301,762	+		ABIE53_002052	0.77	-0.4
2,301,762	+		ABIE53_002052	0.77	+0.2
2,301,762	+		ABIE53_002052	0.77	+0.8
2,301,789	+		ABIE53_002052	0.80	-0.1
2,301,790	-		ABIE53_002052	0.80	+0.2
2,301,949	-				-1.2
2,301,949	-				+0.1
2,302,046	+				-1.2
2,302,089	+				-1.1
2,302,090	-				+0.7
2,302,319	+		ABIE53_002053	0.28	-0.4
2,302,319	+		ABIE53_002053	0.28	+1.0
2,302,361	+		ABIE53_002053	0.32	-1.2
2,302,361	+		ABIE53_002053	0.32	-0.4
2,302,362	-		ABIE53_002053	0.33	-0.6
2,302,362	-		ABIE53_002053	0.33	+0.6
2,302,362	-		ABIE53_002053	0.33	-1.0
2,302,362	-		ABIE53_002053	0.33	+0.1
2,302,362	-		ABIE53_002053	0.33	+0.3
2,302,382	+		ABIE53_002053	0.35	-0.6
2,302,382	+		ABIE53_002053	0.35	-0.4
2,302,382	+		ABIE53_002053	0.35	-0.8
2,302,382	+		ABIE53_002053	0.35	-1.0
2,302,382	+		ABIE53_002053	0.35	-0.2
2,302,382	+		ABIE53_002053	0.35	-0.6
2,302,382	+		ABIE53_002053	0.35	-0.7
2,302,383	-		ABIE53_002053	0.35	-0.2
2,302,383	-		ABIE53_002053	0.35	+0.4
2,302,383	-		ABIE53_002053	0.35	-0.0
2,302,383	-		ABIE53_002053	0.35	-0.2
2,302,448	+		ABIE53_002053	0.41	-1.1
2,302,449	-		ABIE53_002053	0.41	-1.6
2,302,449	-		ABIE53_002053	0.41	-1.0
2,302,449	-		ABIE53_002053	0.41	+0.4
2,302,449	-		ABIE53_002053	0.41	-0.2
2,302,449	-		ABIE53_002053	0.41	+1.2
2,302,649	+		ABIE53_002053	0.62	-0.9
2,302,650	-		ABIE53_002053	0.62	+0.7
2,302,843	-		ABIE53_002053	0.82	-0.5
2,302,843	-		ABIE53_002053	0.82	-0.4
2,302,843	-		ABIE53_002053	0.82	-0.5
2,302,868	+		ABIE53_002053	0.84	-0.5
2,302,868	+		ABIE53_002053	0.84	-1.1
2,302,868	+		ABIE53_002053	0.84	+0.8
2,302,868	+		ABIE53_002053	0.84	+0.6
2,302,868	+		ABIE53_002053	0.84	+0.3
2,302,868	+		ABIE53_002053	0.84	+1.4
2,302,868	+		ABIE53_002053	0.84	+0.6
2,302,869	-		ABIE53_002053	0.85	+0.4
2,302,869	-		ABIE53_002053	0.85	-0.6
2,302,869	-		ABIE53_002053	0.85	+0.1
2,302,869	-		ABIE53_002053	0.85	+0.4
2,302,869	-		ABIE53_002053	0.85	+0.8
2,302,869	-		ABIE53_002053	0.85	+1.6
2,302,869	-		ABIE53_002053	0.85	-0.7
2,302,869	-		ABIE53_002053	0.85	-0.7
2,302,869	-		ABIE53_002053	0.85	-0.6
2,302,869	-		ABIE53_002053	0.85	+0.4
2,302,869	-		ABIE53_002053	0.85	-0.4
2,302,869	-		ABIE53_002053	0.85	+0.6
2,302,869	-		ABIE53_002053	0.85	-0.9