Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005693

Experiment: R2A with Isopropyl alcohol 21 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Isopropyl alcohol 21 g/L
1,992,751	-		ABIE53_005692	0.28	-1.2
1,992,753	+		ABIE53_005692	0.28	-0.0
1,992,765	+		ABIE53_005692	0.29	-0.4
1,992,766	-		ABIE53_005692	0.29	-0.5
1,992,769	-		ABIE53_005692	0.29	-1.0
1,992,769	-		ABIE53_005692	0.29	+0.6
1,992,859	-		ABIE53_005692	0.37	-0.0
1,992,859	-		ABIE53_005692	0.37	-0.6
1,992,865	+		ABIE53_005692	0.37	-0.7
1,992,865	+		ABIE53_005692	0.37	-1.4
1,992,866	-		ABIE53_005692	0.37	-0.4
1,992,866	-		ABIE53_005692	0.37	-0.9
1,992,869	-		ABIE53_005692	0.38	-0.7
1,992,900	+		ABIE53_005692	0.40	-0.3
1,992,901	-		ABIE53_005692	0.40	-0.8
1,992,901	-		ABIE53_005692	0.40	+1.3
1,992,901	-		ABIE53_005692	0.40	+0.0
1,992,901	-		ABIE53_005692	0.40	+0.6
1,992,901	-		ABIE53_005692	0.40	-0.3
1,992,901	-		ABIE53_005692	0.40	+0.3
1,993,062	+		ABIE53_005692	0.54	-0.8
1,993,063	-		ABIE53_005692	0.54	+0.6
1,993,063	-		ABIE53_005692	0.54	+0.8
1,993,063	-		ABIE53_005692	0.54	-0.1
1,993,176	+		ABIE53_005692	0.64	-0.1
1,993,177	-		ABIE53_005692	0.64	-1.5
1,993,392	+		ABIE53_005692	0.82	+1.1
1,993,392	+		ABIE53_005692	0.82	-0.1
1,993,392	+		ABIE53_005692	0.82	+3.2
1,993,392	+		ABIE53_005692	0.82	-1.0
1,993,393	-		ABIE53_005692	0.82	-0.4
1,993,393	-		ABIE53_005692	0.82	-0.3
1,993,393	-		ABIE53_005692	0.82	-0.4
1,993,393	-		ABIE53_005692	0.82	+0.5
1,993,394	+		ABIE53_005692	0.82	-0.2
1,993,394	+		ABIE53_005692	0.82	-0.9
1,993,394	+		ABIE53_005692	0.82	-0.3
1,993,394	+		ABIE53_005692	0.82	+0.8
1,993,394	+		ABIE53_005692	0.82	+0.0
1,993,394	+		ABIE53_005692	0.82	-0.7
1,993,395	-		ABIE53_005692	0.82	+0.7
1,993,395	-		ABIE53_005692	0.82	-0.5
1,993,395	-		ABIE53_005692	0.82	-0.6
1,993,395	-		ABIE53_005692	0.82	+1.3
1,993,395	-		ABIE53_005692	0.82	+0.1
1,993,395	-		ABIE53_005692	0.82	-1.3
1,993,395	-		ABIE53_005692	0.82	-1.1
1,993,395	-		ABIE53_005692	0.82	-0.7
1,993,395	-		ABIE53_005692	0.82	+0.6
1,993,395	-		ABIE53_005692	0.82	-0.4
1,993,398	+		ABIE53_005692	0.82	-1.7
1,993,422	-		ABIE53_005692	0.84	-0.9
1,993,526	+				-0.7
1,993,526	+				-1.6
1,993,527	-				+2.5
1,993,527	-				-0.4
1,993,527	-				-0.0
1,993,527	-				+0.2
1,993,603	-				-1.1
1,993,753	-		ABIE53_005693	0.14	-0.8
1,993,753	-		ABIE53_005693	0.14	-1.3
1,993,984	+		ABIE53_005693	0.43	+1.4
1,994,025	+		ABIE53_005693	0.48	-1.7
1,994,133	+		ABIE53_005693	0.62	-0.7
1,994,134	-		ABIE53_005693	0.62	+0.6
1,994,134	-		ABIE53_005693	0.62	+0.1
1,994,134	-		ABIE53_005693	0.62	-0.0
1,994,196	+		ABIE53_005693	0.70	+0.5
1,994,373	+				+1.8
1,994,692	+		ABIE53_005694	0.25	-0.1
1,994,692	+		ABIE53_005694	0.25	-0.6
1,994,693	-		ABIE53_005694	0.25	+2.4
1,994,693	-		ABIE53_005694	0.25	-0.9
1,994,693	-		ABIE53_005694	0.25	+0.9
1,994,693	-		ABIE53_005694	0.25	-1.0
1,994,693	-		ABIE53_005694	0.25	-0.3
1,994,693	-		ABIE53_005694	0.25	-0.2
1,994,881	-		ABIE53_005694	0.44	-0.9
1,994,881	-		ABIE53_005694	0.44	+0.2
1,995,030	+		ABIE53_005694	0.59	-1.0
1,995,203	-		ABIE53_005694	0.76	-1.1