Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001173

Experiment: M9 with Ethanol 2.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Ethanol 2.5 vol%
1,309,997	+		ABIE53_001171	0.70	+0.2
1,310,013	+		ABIE53_001171	0.73	-0.4
1,310,013	+		ABIE53_001171	0.73	-0.1
1,310,013	+		ABIE53_001171	0.73	-1.7
1,310,014	-		ABIE53_001171	0.73	+0.5
1,310,014	-		ABIE53_001171	0.73	+0.7
1,310,014	-		ABIE53_001171	0.73	+0.8
1,310,014	-		ABIE53_001171	0.73	-0.2
1,310,014	-		ABIE53_001171	0.73	+0.6
1,310,014	-		ABIE53_001171	0.73	-0.1
1,310,014	-		ABIE53_001171	0.73	-0.1
1,310,014	-		ABIE53_001171	0.73	+0.1
1,310,014	-		ABIE53_001171	0.73	+0.1
1,310,014	-		ABIE53_001171	0.73	-0.8
1,310,014	-		ABIE53_001171	0.73	+1.1
1,310,014	-		ABIE53_001171	0.73	+0.4
1,310,014	-		ABIE53_001171	0.73	-0.8
1,310,014	-		ABIE53_001171	0.73	-0.4
1,310,167	+				+0.7
1,310,168	-				+0.8
1,310,168	-				-2.4
1,310,198	-				+1.1
1,310,208	-				-0.6
1,310,208	-				+1.3
1,310,222	+				+0.3
1,310,222	+				-0.9
1,310,222	+				+0.7
1,310,223	-				+0.2
1,310,223	-				+2.0
1,310,223	-				-0.4
1,310,223	-				+0.6
1,310,223	-				+0.6
1,310,223	-				-0.0
1,310,223	-				+0.2
1,310,223	-				+0.7
1,310,223	-				+0.0
1,310,228	+				-0.3
1,310,228	+				+0.0
1,310,228	+				+2.1
1,310,228	+				-0.7
1,310,228	+				+0.7
1,310,228	+				+1.2
1,310,228	+				-0.2
1,310,229	-				+0.3
1,310,229	-				+0.6
1,310,229	-				-0.2
1,310,229	-				+0.1
1,310,229	-				-0.0
1,310,229	-				-0.9
1,310,229	-				+0.1
1,310,286	+				-0.4
1,310,287	-				+0.7
1,310,287	-				+0.1
1,310,292	+				+0.2
1,310,292	+				+0.5
1,310,293	-				-0.0
1,310,293	-				+0.2
1,310,293	-				+1.6
1,310,444	-		ABIE53_001172	0.28	-0.3
1,310,444	-		ABIE53_001172	0.28	-0.5
1,310,461	+		ABIE53_001172	0.31	-1.2
1,310,461	+		ABIE53_001172	0.31	-0.4
1,310,461	+		ABIE53_001172	0.31	-0.6
1,310,462	-		ABIE53_001172	0.31	-1.9
1,310,563	+		ABIE53_001172	0.45	+0.6
1,310,564	-		ABIE53_001172	0.45	+0.4
1,310,564	-		ABIE53_001172	0.45	+0.5
1,310,737	+		ABIE53_001172	0.69	-0.2
1,310,867	+		ABIE53_001172	0.88	+0.6
1,310,867	+		ABIE53_001172	0.88	-0.1
1,310,867	+		ABIE53_001172	0.88	+0.3
1,310,868	-		ABIE53_001172	0.88	-0.4
1,310,868	-		ABIE53_001172	0.88	+0.6
1,310,868	-		ABIE53_001172	0.88	-0.3
1,310,868	-		ABIE53_001172	0.88	+1.3
1,310,869	+		ABIE53_001172	0.88	+0.1
1,310,869	+		ABIE53_001172	0.88	-1.8
1,310,869	+		ABIE53_001172	0.88	-1.0
1,310,869	+		ABIE53_001172	0.88	+0.0
1,310,869	+		ABIE53_001172	0.88	-0.5
1,310,869	+		ABIE53_001172	0.88	-0.9
1,310,869	+		ABIE53_001172	0.88	-0.6
1,310,870	-		ABIE53_001172	0.88	-0.9
1,310,870	-		ABIE53_001172	0.88	+0.1
1,310,870	-		ABIE53_001172	0.88	-0.0
1,310,870	-		ABIE53_001172	0.88	-2.2
1,310,870	-		ABIE53_001172	0.88	+0.4
1,310,870	-		ABIE53_001172	0.88	-0.3
1,310,870	-		ABIE53_001172	0.88	-0.5
1,310,952	+				-0.7
1,310,953	-				-0.5
1,310,962	-				-1.7
1,311,056	+				-0.6
1,311,057	-				-0.5
1,311,057	-				+0.4
1,311,057	-				-1.1
1,311,068	+				+0.1
1,311,068	+				+1.8
1,311,068	+				-0.9
1,311,068	+				-2.1
1,311,068	+				-1.3
1,311,068	+				+0.5
1,311,069	-				-2.9
1,311,069	-				-2.0
1,311,069	-				+0.0
1,311,069	-				-1.6
1,311,069	-				-1.6
1,311,069	-				-2.2
1,311,069	-				-0.2
1,311,069	-				-0.3
1,311,069	-				-1.5
1,311,069	-				-2.8
1,311,069	-				-0.5
1,311,111	+		ABIE53_001173	0.11	-0.8
1,311,111	+		ABIE53_001173	0.11	-1.4
1,311,111	+		ABIE53_001173	0.11	-0.3
1,311,112	-		ABIE53_001173	0.11	-1.5
1,311,112	-		ABIE53_001173	0.11	-0.9
1,311,112	-		ABIE53_001173	0.11	-0.4
1,311,112	-		ABIE53_001173	0.11	-1.2
1,311,167	+		ABIE53_001173	0.16	-0.8
1,311,167	+		ABIE53_001173	0.16	-1.7
1,311,168	-		ABIE53_001173	0.16	-0.7
1,311,243	+		ABIE53_001173	0.23	-0.6
1,311,243	+		ABIE53_001173	0.23	-0.5
1,311,244	-		ABIE53_001173	0.23	-0.2
1,311,245	+		ABIE53_001173	0.23	-0.6
1,311,245	+		ABIE53_001173	0.23	-0.9
1,311,245	+		ABIE53_001173	0.23	-0.8
1,311,245	+		ABIE53_001173	0.23	-0.2
1,311,245	+		ABIE53_001173	0.23	-0.5
1,311,245	+		ABIE53_001173	0.23	-1.9
1,311,246	-		ABIE53_001173	0.23	-0.1
1,311,246	-		ABIE53_001173	0.23	+1.5
1,311,246	-		ABIE53_001173	0.23	-1.2
1,311,246	-		ABIE53_001173	0.23	-1.7
1,311,246	-		ABIE53_001173	0.23	-0.2
1,311,246	-		ABIE53_001173	0.23	-2.0
1,311,255	+		ABIE53_001173	0.24	-0.6
1,311,255	+		ABIE53_001173	0.24	-0.6
1,311,255	+		ABIE53_001173	0.24	-1.6
1,311,255	+		ABIE53_001173	0.24	-1.9
1,311,255	+		ABIE53_001173	0.24	+0.6
1,311,255	+		ABIE53_001173	0.24	-1.8
1,311,255	+		ABIE53_001173	0.24	-0.8
1,311,255	+		ABIE53_001173	0.24	-1.6
1,311,255	+		ABIE53_001173	0.24	+0.8
1,311,256	-		ABIE53_001173	0.24	-2.9
1,311,256	-		ABIE53_001173	0.24	-1.0
1,311,256	-		ABIE53_001173	0.24	-1.1
1,311,256	-		ABIE53_001173	0.24	-0.1
1,311,300	+		ABIE53_001173	0.28	-1.5
1,311,301	-		ABIE53_001173	0.28	-0.3
1,311,301	-		ABIE53_001173	0.28	-0.5
1,311,301	-		ABIE53_001173	0.28	-0.3
1,311,344	+		ABIE53_001173	0.32	-0.1
1,311,344	+		ABIE53_001173	0.32	-0.1
1,311,344	+		ABIE53_001173	0.32	-0.2
1,311,345	-		ABIE53_001173	0.32	-0.9
1,311,345	-		ABIE53_001173	0.32	-0.1
1,311,437	+		ABIE53_001173	0.40	-0.3
1,311,437	+		ABIE53_001173	0.40	+1.7
1,311,438	-		ABIE53_001173	0.40	-0.3
1,311,438	-		ABIE53_001173	0.40	-0.4
1,311,563	+		ABIE53_001173	0.52	-0.2
1,311,564	-		ABIE53_001173	0.52	+0.8
1,311,564	-		ABIE53_001173	0.52	-1.6
1,311,564	-		ABIE53_001173	0.52	-1.9
1,311,564	-		ABIE53_001173	0.52	+0.1
1,311,564	-		ABIE53_001173	0.52	-1.5
1,311,564	-		ABIE53_001173	0.52	-2.5
1,311,627	+		ABIE53_001173	0.57	-1.8
1,311,628	-		ABIE53_001173	0.57	-0.9
1,311,628	-		ABIE53_001173	0.57	-0.9
1,311,628	-		ABIE53_001173	0.57	-0.5
1,311,689	+		ABIE53_001173	0.63	-1.8
1,311,689	+		ABIE53_001173	0.63	-1.3
1,311,689	+		ABIE53_001173	0.63	-0.7
1,311,689	+		ABIE53_001173	0.63	-2.4
1,311,690	-		ABIE53_001173	0.63	-0.1
1,311,690	-		ABIE53_001173	0.63	-1.1
1,311,698	-		ABIE53_001173	0.64	-2.8
1,311,698	-		ABIE53_001173	0.64	-0.8
1,311,698	-		ABIE53_001173	0.64	+0.8
1,311,698	-		ABIE53_001173	0.64	-0.7
1,311,784	+		ABIE53_001173	0.72	-1.8
1,312,035	-				+1.8
1,312,035	-				-1.5
1,312,035	-				-1.0
1,312,089	+				-0.5
1,312,089	+				-1.1
1,312,089	+				-1.8
1,312,089	+				-1.4
1,312,090	-				-2.4
1,312,090	-				-0.8
1,312,090	-				-1.5
1,312,090	-				-0.9
1,312,090	-				+1.1
1,312,125	+				+0.2
1,312,127	+				-0.8
1,312,127	+				-1.9
1,312,128	-				+1.2
1,312,191	+				+1.1
1,312,191	+				-0.5
1,312,192	-				-0.4
1,312,192	-				-0.3
1,312,240	+				-0.2
1,312,240	+				-0.2
1,312,241	-				-0.3
1,312,266	+				+0.1
1,312,267	-				-0.3
1,312,351	+				+1.2
1,312,351	+				+0.3
1,312,396	+				-1.5
1,312,396	+				+0.1
1,312,397	-				-0.3
1,312,397	-				-0.7
1,312,435	-				+0.8
1,312,435	-				-1.0
1,312,555	-		ABIE53_001174	0.13	-1.5
1,312,568	+		ABIE53_001174	0.13	-0.1
1,312,569	-		ABIE53_001174	0.13	+0.6
1,312,647	+		ABIE53_001174	0.18	+0.2
1,312,647	+		ABIE53_001174	0.18	-0.1
1,312,647	+		ABIE53_001174	0.18	-0.2
1,312,647	+		ABIE53_001174	0.18	-0.1
1,312,647	+		ABIE53_001174	0.18	+0.8
1,312,647	+		ABIE53_001174	0.18	-1.0
1,312,648	-		ABIE53_001174	0.18	+0.2
1,312,648	-		ABIE53_001174	0.18	-0.7
1,312,648	-		ABIE53_001174	0.18	-0.8
1,312,648	-		ABIE53_001174	0.18	+0.0
1,312,648	-		ABIE53_001174	0.18	-0.2
1,312,815	+		ABIE53_001174	0.28	-1.6
1,312,815	+		ABIE53_001174	0.28	+0.1
1,312,815	+		ABIE53_001174	0.28	+1.3
1,312,815	+		ABIE53_001174	0.28	-0.5
1,312,815	+		ABIE53_001174	0.28	-0.4
1,312,815	+		ABIE53_001174	0.28	-0.6
1,312,815	+		ABIE53_001174	0.28	+0.1
1,312,816	-		ABIE53_001174	0.28	+0.2
1,312,816	-		ABIE53_001174	0.28	-0.8
1,312,816	-		ABIE53_001174	0.28	+0.3
1,312,816	-		ABIE53_001174	0.28	+0.2
1,312,816	-		ABIE53_001174	0.28	-1.6
1,312,816	-		ABIE53_001174	0.28	+0.1
1,312,824	+		ABIE53_001174	0.29	+3.8
1,312,825	-		ABIE53_001174	0.29	-1.2
1,312,825	-		ABIE53_001174	0.29	-0.2
1,312,825	-		ABIE53_001174	0.29	-0.4