Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003341

Experiment: R2A with Ethanol 2.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ethanol 2.5 vol%
3,762,743	+		ABIE53_003340	0.43	+1.2
3,762,743	+		ABIE53_003340	0.43	-0.4
3,762,790	+		ABIE53_003340	0.45	+0.2
3,762,790	+		ABIE53_003340	0.45	-0.6
3,762,790	+		ABIE53_003340	0.45	-0.5
3,762,790	+		ABIE53_003340	0.45	+1.0
3,762,790	+		ABIE53_003340	0.45	-0.0
3,762,790	+		ABIE53_003340	0.45	+0.2
3,762,790	+		ABIE53_003340	0.45	-0.8
3,762,790	+		ABIE53_003340	0.45	+0.1
3,762,790	+		ABIE53_003340	0.45	+0.7
3,762,790	+		ABIE53_003340	0.45	-0.2
3,762,790	+		ABIE53_003340	0.45	-0.4
3,762,790	+		ABIE53_003340	0.45	-0.6
3,762,790	+		ABIE53_003340	0.45	+1.3
3,762,790	+		ABIE53_003340	0.45	-2.1
3,762,790	+		ABIE53_003340	0.45	-0.6
3,762,790	+		ABIE53_003340	0.45	+0.4
3,762,791	-		ABIE53_003340	0.46	+1.9
3,762,791	-		ABIE53_003340	0.46	+0.8
3,762,791	-		ABIE53_003340	0.46	-0.7
3,762,791	-		ABIE53_003340	0.46	-0.8
3,762,791	-		ABIE53_003340	0.46	-0.2
3,762,793	+		ABIE53_003340	0.46	+0.0
3,762,793	+		ABIE53_003340	0.46	-0.5
3,762,794	-		ABIE53_003340	0.46	+0.3
3,762,880	+		ABIE53_003340	0.51	-0.1
3,762,880	+		ABIE53_003340	0.51	-0.8
3,762,880	+		ABIE53_003340	0.51	+1.0
3,762,880	+		ABIE53_003340	0.51	+0.0
3,762,880	+		ABIE53_003340	0.51	-0.2
3,762,880	+		ABIE53_003340	0.51	+0.2
3,762,880	+		ABIE53_003340	0.51	+0.9
3,762,880	+		ABIE53_003340	0.51	+0.1
3,762,880	+		ABIE53_003340	0.51	-0.4
3,762,880	+		ABIE53_003340	0.51	+0.0
3,762,880	+		ABIE53_003340	0.51	+0.9
3,762,880	+		ABIE53_003340	0.51	+0.8
3,762,880	+		ABIE53_003340	0.51	-0.1
3,762,881	-		ABIE53_003340	0.51	+1.0
3,762,881	-		ABIE53_003340	0.51	-0.4
3,762,881	-		ABIE53_003340	0.51	+0.4
3,762,881	-		ABIE53_003340	0.51	-0.4
3,762,881	-		ABIE53_003340	0.51	-0.1
3,762,881	-		ABIE53_003340	0.51	-0.1
3,762,881	-		ABIE53_003340	0.51	+1.4
3,762,881	-		ABIE53_003340	0.51	+0.1
3,762,881	-		ABIE53_003340	0.51	+0.3
3,762,881	-		ABIE53_003340	0.51	+0.1
3,762,884	+		ABIE53_003340	0.51	-0.3
3,762,884	+		ABIE53_003340	0.51	+0.1
3,762,884	+		ABIE53_003340	0.51	-0.1
3,762,884	+		ABIE53_003340	0.51	+0.1
3,762,884	+		ABIE53_003340	0.51	-0.2
3,762,884	+		ABIE53_003340	0.51	+0.0
3,762,884	+		ABIE53_003340	0.51	+1.1
3,762,884	+		ABIE53_003340	0.51	+0.5
3,762,885	-		ABIE53_003340	0.51	-1.7
3,762,885	-		ABIE53_003340	0.51	-0.1
3,762,885	-		ABIE53_003340	0.51	+1.1
3,762,885	-		ABIE53_003340	0.51	+0.4
3,762,885	-		ABIE53_003340	0.51	+0.2
3,762,885	-		ABIE53_003340	0.51	-0.4
3,762,885	-		ABIE53_003340	0.51	+0.1
3,762,885	-		ABIE53_003340	0.51	+0.4
3,762,885	-		ABIE53_003340	0.51	+2.0
3,762,886	+		ABIE53_003340	0.52	+0.4
3,762,998	+		ABIE53_003340	0.59	-0.5
3,762,998	+		ABIE53_003340	0.59	-1.5
3,762,999	-		ABIE53_003340	0.59	-0.6
3,763,270	+		ABIE53_003340	0.76	-0.7
3,763,270	+		ABIE53_003340	0.76	-0.5
3,763,270	+		ABIE53_003340	0.76	-1.3
3,763,270	+		ABIE53_003340	0.76	-0.3
3,763,270	+		ABIE53_003340	0.76	-0.8
3,763,270	+		ABIE53_003340	0.76	-2.6
3,763,270	+		ABIE53_003340	0.76	+1.0
3,763,270	+		ABIE53_003340	0.76	-0.7
3,763,270	+		ABIE53_003340	0.76	+1.6
3,763,270	+		ABIE53_003340	0.76	-0.8
3,763,270	+		ABIE53_003340	0.76	-0.3
3,763,270	+		ABIE53_003340	0.76	+1.0
3,763,270	+		ABIE53_003340	0.76	-0.1
3,763,270	+		ABIE53_003340	0.76	+0.1
3,763,270	+		ABIE53_003340	0.76	-0.5
3,763,270	+		ABIE53_003340	0.76	-0.7
3,763,270	+		ABIE53_003340	0.76	+0.0
3,763,270	+		ABIE53_003340	0.76	-0.7
3,763,270	+		ABIE53_003340	0.76	-1.2
3,763,270	+		ABIE53_003340	0.76	+1.1
3,763,271	-		ABIE53_003340	0.76	+0.6
3,763,271	-		ABIE53_003340	0.76	-0.3
3,763,271	-		ABIE53_003340	0.76	-1.4
3,763,271	-		ABIE53_003340	0.76	-0.3
3,763,271	-		ABIE53_003340	0.76	+0.8
3,763,271	-		ABIE53_003340	0.76	-0.8
3,763,271	-		ABIE53_003340	0.76	-1.3
3,763,271	-		ABIE53_003340	0.76	+0.0
3,763,271	-		ABIE53_003340	0.76	-0.4
3,763,271	-		ABIE53_003340	0.76	+0.1
3,763,271	-		ABIE53_003340	0.76	-0.1
3,763,271	-		ABIE53_003340	0.76	-1.0
3,763,687	+				+0.1
3,763,688	-				-0.2
3,763,688	-				-2.3
3,763,775	+				-0.2
3,763,775	+				-0.0
3,763,776	-				-0.8
3,763,776	-				-0.5
3,763,776	-				-0.3
3,763,776	-				-2.0
3,763,776	-				-0.3
3,763,859	+				-0.1
3,763,859	+				-0.9
3,763,859	+				+0.5
3,763,860	-				+2.0
3,763,860	-				-0.1
3,763,889	+				-0.6
3,763,889	+				+1.1
3,763,889	+				-0.8
3,763,890	-				-1.2
3,764,065	+		ABIE53_003341	0.19	+1.1
3,764,075	+		ABIE53_003341	0.20	-0.5
3,764,075	+		ABIE53_003341	0.20	+0.6
3,764,076	-		ABIE53_003341	0.20	+0.3
3,764,076	-		ABIE53_003341	0.20	-0.3
3,764,076	-		ABIE53_003341	0.20	-0.4
3,764,076	-		ABIE53_003341	0.20	+0.5
3,764,078	+		ABIE53_003341	0.20	+0.5
3,764,078	+		ABIE53_003341	0.20	+0.5
3,764,079	-		ABIE53_003341	0.20	-0.8
3,764,093	+		ABIE53_003341	0.21	-0.2
3,764,093	+		ABIE53_003341	0.21	-2.8
3,764,093	+		ABIE53_003341	0.21	-1.8
3,764,093	+		ABIE53_003341	0.21	-0.1
3,764,093	+		ABIE53_003341	0.21	+1.0
3,764,093	+		ABIE53_003341	0.21	+1.1
3,764,093	+		ABIE53_003341	0.21	-1.5
3,764,093	+		ABIE53_003341	0.21	+0.2
3,764,093	+		ABIE53_003341	0.21	-0.5
3,764,094	-		ABIE53_003341	0.21	-0.5
3,764,094	-		ABIE53_003341	0.21	+0.2
3,764,094	-		ABIE53_003341	0.21	-0.0
3,764,094	-		ABIE53_003341	0.21	-0.7
3,764,094	-		ABIE53_003341	0.21	+0.4
3,764,094	-		ABIE53_003341	0.21	-0.4
3,764,096	+		ABIE53_003341	0.21	-0.5
3,764,096	+		ABIE53_003341	0.21	-0.1
3,764,096	+		ABIE53_003341	0.21	-0.9
3,764,096	+		ABIE53_003341	0.21	-0.8
3,764,096	+		ABIE53_003341	0.21	-0.0
3,764,096	+		ABIE53_003341	0.21	+0.4
3,764,096	+		ABIE53_003341	0.21	-0.6
3,764,097	-		ABIE53_003341	0.21	-0.1
3,764,097	-		ABIE53_003341	0.21	+0.3
3,764,097	-		ABIE53_003341	0.21	+0.6
3,764,097	-		ABIE53_003341	0.21	-0.4
3,764,097	-		ABIE53_003341	0.21	+0.1
3,764,154	+		ABIE53_003341	0.24	-0.1
3,764,155	-		ABIE53_003341	0.24	+1.8
3,764,155	-		ABIE53_003341	0.24	+1.7
3,764,155	-		ABIE53_003341	0.24	-1.4
3,764,155	-		ABIE53_003341	0.24	+0.1
3,764,155	-		ABIE53_003341	0.24	-0.9
3,764,201	+		ABIE53_003341	0.27	-1.5
3,764,201	+		ABIE53_003341	0.27	-0.4
3,764,201	+		ABIE53_003341	0.27	+1.6
3,764,201	+		ABIE53_003341	0.27	-0.4
3,764,201	+		ABIE53_003341	0.27	+0.2
3,764,201	+		ABIE53_003341	0.27	-1.6
3,764,201	+		ABIE53_003341	0.27	+0.4
3,764,201	+		ABIE53_003341	0.27	-1.1
3,764,201	+		ABIE53_003341	0.27	+0.3
3,764,201	+		ABIE53_003341	0.27	-0.5
3,764,202	-		ABIE53_003341	0.27	+0.2
3,764,202	-		ABIE53_003341	0.27	-0.3
3,764,202	-		ABIE53_003341	0.27	+0.4
3,764,202	-		ABIE53_003341	0.27	-1.2
3,764,202	-		ABIE53_003341	0.27	-0.6
3,764,202	-		ABIE53_003341	0.27	+0.2
3,764,202	-		ABIE53_003341	0.27	-1.3
3,764,202	-		ABIE53_003341	0.27	-0.3
3,764,202	-		ABIE53_003341	0.27	-0.4
3,764,202	-		ABIE53_003341	0.27	-1.6
3,764,202	-		ABIE53_003341	0.27	-0.3
3,764,202	-		ABIE53_003341	0.27	+0.2
3,764,202	-		ABIE53_003341	0.27	-1.0
3,764,310	+		ABIE53_003341	0.33	+0.9
3,764,311	-		ABIE53_003341	0.33	+0.7
3,764,326	+		ABIE53_003341	0.34	-0.7
3,764,326	+		ABIE53_003341	0.34	+1.4
3,764,327	-		ABIE53_003341	0.34	+1.9
3,764,327	-		ABIE53_003341	0.34	-0.4
3,764,345	+		ABIE53_003341	0.35	+0.1
3,764,345	+		ABIE53_003341	0.35	-0.2
3,764,345	+		ABIE53_003341	0.35	-0.5
3,764,345	+		ABIE53_003341	0.35	-1.0
3,764,465	+		ABIE53_003341	0.42	-0.4
3,764,465	+		ABIE53_003341	0.42	-0.9
3,764,465	+		ABIE53_003341	0.42	-0.0
3,764,465	+		ABIE53_003341	0.42	+0.3
3,764,465	+		ABIE53_003341	0.42	-1.5
3,764,465	+		ABIE53_003341	0.42	-0.2
3,764,465	+		ABIE53_003341	0.42	-0.0
3,764,465	+		ABIE53_003341	0.42	+0.1
3,764,465	+		ABIE53_003341	0.42	-0.0
3,764,465	+		ABIE53_003341	0.42	-0.2
3,764,465	+		ABIE53_003341	0.42	-0.9
3,764,465	+		ABIE53_003341	0.42	+0.6
3,764,465	+		ABIE53_003341	0.42	+0.2
3,764,465	+		ABIE53_003341	0.42	-1.1
3,764,465	+		ABIE53_003341	0.42	-0.0
3,764,465	+		ABIE53_003341	0.42	-0.2
3,764,465	+		ABIE53_003341	0.42	-0.7
3,764,465	+		ABIE53_003341	0.42	-0.9
3,764,465	+		ABIE53_003341	0.42	-0.9
3,764,465	+		ABIE53_003341	0.42	-0.2
3,764,465	+		ABIE53_003341	0.42	+0.9
3,764,465	+		ABIE53_003341	0.42	+0.4
3,764,465	+		ABIE53_003341	0.42	-0.4
3,764,465	+		ABIE53_003341	0.42	+0.2
3,764,465	+		ABIE53_003341	0.42	-0.6
3,764,465	+		ABIE53_003341	0.42	+1.9
3,764,466	-		ABIE53_003341	0.42	+0.2
3,764,466	-		ABIE53_003341	0.42	-0.1
3,764,466	-		ABIE53_003341	0.42	-0.3
3,764,466	-		ABIE53_003341	0.42	+3.7
3,764,466	-		ABIE53_003341	0.42	-0.2
3,764,466	-		ABIE53_003341	0.42	-0.3
3,764,466	-		ABIE53_003341	0.42	+2.2
3,764,466	-		ABIE53_003341	0.42	-0.2
3,764,466	-		ABIE53_003341	0.42	-0.2
3,764,466	-		ABIE53_003341	0.42	-0.6
3,764,466	-		ABIE53_003341	0.42	-0.4
3,764,466	-		ABIE53_003341	0.42	-0.1
3,764,466	-		ABIE53_003341	0.42	-0.2
3,764,466	-		ABIE53_003341	0.42	+1.7
3,764,466	-		ABIE53_003341	0.42	-1.0
3,764,466	-		ABIE53_003341	0.42	-1.7
3,764,466	-		ABIE53_003341	0.42	-0.1
3,764,466	-		ABIE53_003341	0.42	-0.1
3,764,466	-		ABIE53_003341	0.42	+1.1
3,764,466	-		ABIE53_003341	0.42	+0.8
3,764,466	-		ABIE53_003341	0.42	-0.1
3,764,466	-		ABIE53_003341	0.42	-0.3
3,764,466	-		ABIE53_003341	0.42	-1.5
3,764,576	+		ABIE53_003341	0.48	-0.2
3,764,577	-		ABIE53_003341	0.48	+1.5
3,764,577	-		ABIE53_003341	0.48	+1.6
3,764,577	-		ABIE53_003341	0.48	+0.6
3,764,577	-		ABIE53_003341	0.48	+1.8
3,764,577	-		ABIE53_003341	0.48	-0.9
3,764,598	-		ABIE53_003341	0.49	-0.2
3,764,598	-		ABIE53_003341	0.49	-0.3
3,764,598	-		ABIE53_003341	0.49	-0.5
3,764,598	-		ABIE53_003341	0.49	+1.1
3,764,632	-		ABIE53_003341	0.51	-0.9
3,764,633	+		ABIE53_003341	0.51	-0.3
3,764,633	+		ABIE53_003341	0.51	+1.4
3,764,633	+		ABIE53_003341	0.51	+0.0
3,764,633	+		ABIE53_003341	0.51	-2.0
3,764,633	+		ABIE53_003341	0.51	-0.2
3,764,633	+		ABIE53_003341	0.51	-0.4
3,764,633	+		ABIE53_003341	0.51	+1.5
3,764,633	+		ABIE53_003341	0.51	+0.3
3,764,633	+		ABIE53_003341	0.51	-1.2
3,764,633	+		ABIE53_003341	0.51	-0.3
3,764,633	+		ABIE53_003341	0.51	-0.4
3,764,633	+		ABIE53_003341	0.51	-0.6
3,764,633	+		ABIE53_003341	0.51	-0.4
3,764,633	+		ABIE53_003341	0.51	-0.0
3,764,633	+		ABIE53_003341	0.51	+0.3
3,764,633	+		ABIE53_003341	0.51	-0.4
3,764,633	+		ABIE53_003341	0.51	+0.7
3,764,634	-		ABIE53_003341	0.51	-0.8
3,764,634	-		ABIE53_003341	0.51	-1.5
3,764,634	-		ABIE53_003341	0.51	+1.6
3,764,634	-		ABIE53_003341	0.51	-0.5
3,764,634	-		ABIE53_003341	0.51	-0.1
3,764,634	-		ABIE53_003341	0.51	-0.5
3,764,634	-		ABIE53_003341	0.51	-1.6
3,764,634	-		ABIE53_003341	0.51	+0.4
3,764,634	-		ABIE53_003341	0.51	-0.6
3,764,634	-		ABIE53_003341	0.51	+0.1
3,764,634	-		ABIE53_003341	0.51	-1.6
3,764,634	-		ABIE53_003341	0.51	+1.7
3,764,634	-		ABIE53_003341	0.51	-0.3
3,764,634	-		ABIE53_003341	0.51	-1.1
3,764,634	-		ABIE53_003341	0.51	-0.6
3,764,634	-		ABIE53_003341	0.51	-0.3
3,764,634	-		ABIE53_003341	0.51	-1.2
3,764,634	-		ABIE53_003341	0.51	-1.4
3,764,634	-		ABIE53_003341	0.51	-0.8
3,764,634	-		ABIE53_003341	0.51	+1.8
3,764,634	-		ABIE53_003341	0.51	-0.2
3,764,634	-		ABIE53_003341	0.51	-1.0
3,764,634	-		ABIE53_003341	0.51	-1.1
3,764,634	-		ABIE53_003341	0.51	-0.5
3,764,634	-		ABIE53_003341	0.51	-0.2
3,764,634	-		ABIE53_003341	0.51	-0.1
3,764,634	-		ABIE53_003341	0.51	-0.4
3,764,634	-		ABIE53_003341	0.51	-0.2
3,764,634	-		ABIE53_003341	0.51	+0.1
3,764,634	-		ABIE53_003341	0.51	+0.2
3,764,694	+		ABIE53_003341	0.55	-0.6
3,764,694	+		ABIE53_003341	0.55	-1.5
3,764,694	+		ABIE53_003341	0.55	+0.2
3,764,694	+		ABIE53_003341	0.55	-0.6
3,764,694	+		ABIE53_003341	0.55	+1.2
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