Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005843

Experiment: M9 with 3-methyl-2-butenol 2 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with 3-methyl-2-butenol 2 g/L
2,152,129	-		ABIE53_005841	0.67	+2.0
2,152,129	-		ABIE53_005841	0.67	+1.2
2,152,211	+		ABIE53_005841	0.77	-1.5
2,152,347	+				-0.3
2,152,347	+				-0.4
2,152,566	+		ABIE53_005842	0.31	-0.4
2,152,566	+		ABIE53_005842	0.31	+0.6
2,152,567	-		ABIE53_005842	0.31	-1.0
2,152,567	-		ABIE53_005842	0.31	+2.9
2,152,579	+		ABIE53_005842	0.34	+0.7
2,152,579	+		ABIE53_005842	0.34	-0.0
2,152,580	-		ABIE53_005842	0.34	-0.7
2,152,772	+		ABIE53_005842	0.70	+0.3
2,152,773	-		ABIE53_005842	0.70	-0.3
2,152,831	+		ABIE53_005842	0.81	-1.1
2,152,832	-		ABIE53_005842	0.81	-1.0
2,152,832	-		ABIE53_005842	0.81	-0.3
2,152,843	+		ABIE53_005842	0.83	-0.4
2,152,850	+		ABIE53_005842	0.84	-0.3
2,152,851	-		ABIE53_005842	0.84	+0.0
2,152,851	-		ABIE53_005842	0.84	-0.7
2,153,013	+				+0.6
2,153,202	+		ABIE53_005843	0.17	-0.4
2,153,202	+		ABIE53_005843	0.17	-0.3
2,153,202	+		ABIE53_005843	0.17	+0.2
2,153,298	-		ABIE53_005843	0.24	-1.3
2,153,339	+		ABIE53_005843	0.26	-1.1
2,153,340	-		ABIE53_005843	0.26	-1.5
2,153,421	+		ABIE53_005843	0.31	+0.1
2,153,421	+		ABIE53_005843	0.31	-0.4
2,153,553	+		ABIE53_005843	0.40	-0.7
2,153,554	-		ABIE53_005843	0.40	-1.0
2,153,554	-		ABIE53_005843	0.40	-0.6
2,153,554	-		ABIE53_005843	0.40	-0.6
2,153,679	+		ABIE53_005843	0.48	-0.2
2,153,679	+		ABIE53_005843	0.48	-0.6
2,153,697	+		ABIE53_005843	0.49	-0.1
2,153,698	-		ABIE53_005843	0.49	+1.5
2,153,698	-		ABIE53_005843	0.49	-0.1
2,153,738	+		ABIE53_005843	0.51	+0.4
2,153,739	-		ABIE53_005843	0.51	-0.9
2,153,841	+		ABIE53_005843	0.58	+0.4
2,153,842	-		ABIE53_005843	0.58	-1.9
2,153,842	-		ABIE53_005843	0.58	-1.7
2,153,842	-		ABIE53_005843	0.58	-1.2
2,153,842	-		ABIE53_005843	0.58	-1.3
2,153,859	+		ABIE53_005843	0.59	+0.2
2,153,925	-		ABIE53_005843	0.63	-0.7
2,154,106	-		ABIE53_005843	0.75	-0.5
2,154,128	+		ABIE53_005843	0.76	-0.6
2,154,129	+		ABIE53_005843	0.76	+0.5
2,154,129	+		ABIE53_005843	0.76	-0.5
2,154,129	+		ABIE53_005843	0.76	-1.8
2,154,129	+		ABIE53_005843	0.76	+1.3
2,154,445	-				-1.0
2,154,504	+				-0.2
2,154,784	+		ABIE53_005844	0.34	+1.0
2,154,924	+		ABIE53_005844	0.51	-0.3
2,154,924	+		ABIE53_005844	0.51	+0.6
2,154,924	+		ABIE53_005844	0.51	+0.4
2,154,925	-		ABIE53_005844	0.51	-1.5
2,155,233	+		ABIE53_005844	0.89	+2.8
2,155,233	+		ABIE53_005844	0.89	-0.5
2,155,234	-		ABIE53_005844	0.89	-0.1
2,155,234	-		ABIE53_005844	0.89	+0.5
2,155,234	-		ABIE53_005844	0.89	+0.4
2,155,317	+				+1.2
2,155,317	+				+0.1
2,155,318	-				-0.4
2,155,446	+				-0.8
2,155,446	+				+0.2
2,155,446	+				+0.9
2,155,447	-				-0.7
2,155,493	-				+0.3
2,155,494	+				+0.6