Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_004764

Experiment: M9 with 3-methyl-2-butenol 2 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with 3-methyl-2-butenol 2 g/L
968,898	+				-0.4
968,898	+				+0.3
968,898	+				-0.2
968,898	+				+0.1
968,898	+				-0.7
968,898	+				+2.2
968,898	+				+0.7
968,898	+				+0.2
968,898	+				+0.0
968,898	+				-0.2
968,898	+				+0.7
968,898	+				+0.8
968,899	-				-2.1
968,899	-				-2.3
968,899	-				+0.5
968,899	-				-0.6
968,899	-				-1.1
968,899	-				+1.0
968,899	-				-3.0
968,899	-				-0.3
968,899	-				+0.3
968,901	-				-0.9
968,925	-				-1.6
968,973	-				+0.0
969,072	+				+0.7
969,072	+				+2.0
969,072	+				+0.0
969,072	+				+0.6
969,072	+				+0.4
969,073	-				-0.3
969,073	-				-1.4
969,073	-				-0.2
969,073	-				-1.3
969,073	-				-0.5
969,326	+				+2.3
969,327	-				-0.7
969,327	-				-1.0
969,327	-				+0.4
969,327	-				+1.8
969,360	-				-1.2
969,382	-				-0.2
969,417	+				-1.3
969,417	+				+0.3
969,417	+				+0.0
969,417	+				-1.2
969,418	-				-0.7
969,539	+		ABIE53_004764	0.13	-2.2
969,539	+		ABIE53_004764	0.13	-1.9
969,540	-		ABIE53_004764	0.13	-0.5
969,610	+		ABIE53_004764	0.22	-2.1
969,611	-		ABIE53_004764	0.22	+0.4
969,635	+		ABIE53_004764	0.25	+0.9
969,635	+		ABIE53_004764	0.25	-1.8
969,635	+		ABIE53_004764	0.25	-1.3
969,635	+		ABIE53_004764	0.25	-2.0
969,635	+		ABIE53_004764	0.25	-2.8
969,636	-		ABIE53_004764	0.25	-1.2
969,636	-		ABIE53_004764	0.25	-0.9
969,636	-		ABIE53_004764	0.25	-1.4
969,662	-		ABIE53_004764	0.28	-1.3
969,662	-		ABIE53_004764	0.28	+0.3
969,771	+		ABIE53_004764	0.42	-2.6
969,771	+		ABIE53_004764	0.42	-1.9
969,771	+		ABIE53_004764	0.42	-0.8
969,995	+		ABIE53_004764	0.70	-0.4
969,995	+		ABIE53_004764	0.70	-1.6
969,995	+		ABIE53_004764	0.70	-1.3
969,995	+		ABIE53_004764	0.70	-1.8
969,995	+		ABIE53_004764	0.70	-2.1
970,010	+		ABIE53_004764	0.72	-0.6
970,011	-		ABIE53_004764	0.72	-0.2
970,011	-		ABIE53_004764	0.72	-0.9
970,151	+		ABIE53_004764	0.90	-2.4
970,151	+		ABIE53_004764	0.90	-1.8
970,152	-		ABIE53_004764	0.90	-0.7
970,157	+				-2.4
970,157	+				-1.4
970,157	+				-0.6
970,157	+				-0.3
970,158	-				+0.2
970,158	-				-0.4
970,158	-				+0.0
970,193	+				-1.9
970,193	+				-0.2
970,193	+				-0.7
970,193	+				-1.0
970,193	+				-0.6
970,193	+				-0.5
970,194	-				+0.7
970,194	-				-0.9
970,194	-				+0.0
970,211	+				-2.3
970,211	+				-1.1
970,211	+				-1.5
970,211	+				-2.6
970,211	+				-0.2
970,211	+				-1.9
970,211	+				-1.0
970,211	+				-2.3
970,211	+				-0.6
970,211	+				-0.4
970,211	+				-1.3
970,211	+				-1.2
970,211	+				-1.6
970,211	+				-2.1
970,211	+				-2.0
970,212	-				-1.6
970,212	-				-0.3
970,212	-				-0.4
970,212	-				-1.3
970,212	-				+0.1
970,212	-				-2.7
970,212	-				-1.4
970,212	-				-1.0
970,214	+				-1.8
970,215	-				+0.0
970,215	-				-1.3
970,228	+				-1.4
970,228	+				-2.8
970,228	+				-1.9
970,228	+				+0.1
970,232	+				-0.0
970,232	+				+0.1
970,232	+				-1.3
970,232	+				-1.1
970,232	+				-1.6
970,300	+				+1.1
970,301	-				+2.0
970,384	+				+0.0
970,384	+				+0.1
970,384	+				+0.9
970,384	+				+0.7
970,384	+				+1.6
970,384	+				+0.4
970,388	+				-0.3
970,388	+				+0.8
970,388	+				+0.4
970,388	+				+0.2
970,388	+				+1.6
970,388	+				+0.3
970,388	+				+1.2
970,388	+				+0.9
970,388	+				-0.2
970,388	+				+1.0
970,388	+				-0.6
970,388	+				+1.0
970,400	+				+1.0
970,400	+				+2.1
970,400	+				+1.3
970,400	+				+0.6