Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001434

Experiment: M9 with 3-methyl-2-butenol 2 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with 3-methyl-2-butenol 2 g/L
1,602,714	+		ABIE53_001433	0.33	-0.5
1,602,714	+		ABIE53_001433	0.33	-0.6
1,602,715	-		ABIE53_001433	0.33	-0.3
1,602,715	-		ABIE53_001433	0.33	-1.8
1,602,715	-		ABIE53_001433	0.33	+1.5
1,602,821	-		ABIE53_001433	0.42	+1.0
1,602,858	+		ABIE53_001433	0.45	-0.2
1,602,858	+		ABIE53_001433	0.45	+0.2
1,602,924	+		ABIE53_001433	0.50	-0.7
1,602,984	+		ABIE53_001433	0.55	+0.6
1,602,984	+		ABIE53_001433	0.55	-0.4
1,602,984	+		ABIE53_001433	0.55	-0.2
1,602,984	+		ABIE53_001433	0.55	-0.5
1,602,985	-		ABIE53_001433	0.55	-1.3
1,602,985	-		ABIE53_001433	0.55	-1.0
1,602,985	-		ABIE53_001433	0.55	-0.2
1,602,985	-		ABIE53_001433	0.55	-0.2
1,603,026	+		ABIE53_001433	0.59	-2.1
1,603,027	-		ABIE53_001433	0.59	-0.6
1,603,162	+		ABIE53_001433	0.70	-1.1
1,603,162	+		ABIE53_001433	0.70	-0.5
1,603,162	+		ABIE53_001433	0.70	-0.9
1,603,162	+		ABIE53_001433	0.70	+0.5
1,603,162	+		ABIE53_001433	0.70	-0.5
1,603,162	+		ABIE53_001433	0.70	-0.9
1,603,162	+		ABIE53_001433	0.70	-1.0
1,603,162	+		ABIE53_001433	0.70	-0.8
1,603,162	+		ABIE53_001433	0.70	-1.0
1,603,162	+		ABIE53_001433	0.70	-2.2
1,603,162	+		ABIE53_001433	0.70	-0.2
1,603,162	+		ABIE53_001433	0.70	-1.1
1,603,162	+		ABIE53_001433	0.70	-1.8
1,603,162	+		ABIE53_001433	0.70	-1.2
1,603,162	+		ABIE53_001433	0.70	-1.5
1,603,162	+		ABIE53_001433	0.70	+1.6
1,603,162	+		ABIE53_001433	0.70	-0.2
1,603,162	+		ABIE53_001433	0.70	-2.1
1,603,162	+		ABIE53_001433	0.70	-0.7
1,603,162	+		ABIE53_001433	0.70	-2.1
1,603,162	+		ABIE53_001433	0.70	-0.4
1,603,162	+		ABIE53_001433	0.70	-1.0
1,603,162	+		ABIE53_001433	0.70	-0.8
1,603,162	+		ABIE53_001433	0.70	-1.2
1,603,163	-		ABIE53_001433	0.70	+2.0
1,603,163	-		ABIE53_001433	0.70	-2.0
1,603,163	-		ABIE53_001433	0.70	+2.2
1,603,163	-		ABIE53_001433	0.70	+0.1
1,603,163	-		ABIE53_001433	0.70	+1.5
1,603,163	-		ABIE53_001433	0.70	-1.7
1,603,163	-		ABIE53_001433	0.70	-0.2
1,603,163	-		ABIE53_001433	0.70	-0.0
1,603,163	-		ABIE53_001433	0.70	-0.0
1,603,163	-		ABIE53_001433	0.70	+1.5
1,603,163	-		ABIE53_001433	0.70	+0.2
1,603,163	-		ABIE53_001433	0.70	-0.2
1,603,163	-		ABIE53_001433	0.70	+0.1
1,603,163	-		ABIE53_001433	0.70	+1.4
1,603,163	-		ABIE53_001433	0.70	-2.1
1,603,314	+		ABIE53_001433	0.82	-2.2
1,603,314	+		ABIE53_001433	0.82	-0.6
1,603,315	-		ABIE53_001433	0.82	-0.7
1,603,546	+				+2.7
1,603,546	+				-0.7
1,603,546	+				-1.4
1,603,546	+				+1.6
1,603,546	+				+1.1
1,603,546	+				-0.7
1,603,546	+				-0.2
1,603,546	+				-0.6
1,603,546	+				-0.1
1,603,546	+				-0.1
1,603,547	-				-2.3
1,603,547	-				+1.2
1,603,547	-				+0.5
1,603,614	+				-1.1
1,603,614	+				+0.5
1,603,614	+				-3.0
1,603,614	+				-1.0
1,603,615	-				+1.2
1,603,615	-				+1.2
1,603,618	+				-1.9
1,603,618	+				+0.8
1,603,618	+				+0.6
1,603,618	+				+0.9
1,603,618	+				+0.1
1,603,618	+				+0.5
1,603,618	+				-0.9
1,603,618	+				+0.6
1,603,618	+				-0.1
1,603,618	+				+0.7
1,603,618	+				-1.7
1,603,618	+				-3.0
1,603,618	+				-0.2
1,603,618	+				+2.4
1,603,618	+				-1.5
1,603,618	+				-0.7
1,603,618	+				-0.0
1,603,618	+				-0.4
1,603,619	-				+2.0
1,603,619	-				+1.4
1,603,619	-				-0.2
1,603,619	-				-0.5
1,603,619	-				-0.2
1,603,619	-				+0.5
1,603,619	-				-0.3
1,603,619	-				-0.5
1,603,619	-				+0.4
1,603,619	-				+1.4
1,603,619	-				-1.4
1,603,619	-				+0.1
1,603,619	-				-2.1
1,603,619	-				+1.7
1,603,649	+		ABIE53_001434	0.12	-0.7
1,603,650	-		ABIE53_001434	0.12	+0.2
1,603,650	-		ABIE53_001434	0.12	+0.8
1,603,821	+		ABIE53_001434	0.81	+0.1
1,603,822	-		ABIE53_001434	0.82	+2.8
1,603,935	+		ABIE53_001435	0.13	+1.4
1,603,936	-		ABIE53_001435	0.13	+0.4
1,603,937	+		ABIE53_001435	0.13	+1.9
1,603,937	+		ABIE53_001435	0.13	+0.8
1,603,937	+		ABIE53_001435	0.13	-0.3
1,603,937	+		ABIE53_001435	0.13	+0.9
1,603,937	+		ABIE53_001435	0.13	+1.6
1,603,938	-		ABIE53_001435	0.13	-0.0
1,603,938	-		ABIE53_001435	0.13	+1.1
1,603,938	-		ABIE53_001435	0.13	+0.1
1,603,998	+		ABIE53_001435	0.30	-1.1
1,603,998	+		ABIE53_001435	0.30	-0.3
1,603,998	+		ABIE53_001435	0.30	-0.6
1,603,998	+		ABIE53_001435	0.30	-0.2
1,603,998	+		ABIE53_001435	0.30	+0.3
1,603,998	+		ABIE53_001435	0.30	+1.7
1,603,998	+		ABIE53_001435	0.30	+0.5
1,603,998	+		ABIE53_001435	0.30	-0.5
1,603,998	+		ABIE53_001435	0.30	+1.2
1,603,998	+		ABIE53_001435	0.30	-0.3
1,603,999	-		ABIE53_001435	0.31	-0.8
1,603,999	-		ABIE53_001435	0.31	+0.3
1,603,999	-		ABIE53_001435	0.31	+0.7
1,603,999	-		ABIE53_001435	0.31	-0.1
1,603,999	-		ABIE53_001435	0.31	+0.3
1,603,999	-		ABIE53_001435	0.31	-0.1
1,603,999	-		ABIE53_001435	0.31	+0.2
1,603,999	-		ABIE53_001435	0.31	-1.0
1,604,034	+		ABIE53_001435	0.40	-0.3
1,604,034	+		ABIE53_001435	0.40	-0.6
1,604,035	-		ABIE53_001435	0.41	-0.7
1,604,035	-		ABIE53_001435	0.41	-1.8
1,604,035	-		ABIE53_001435	0.41	-0.9
1,604,035	-		ABIE53_001435	0.41	-0.6
1,604,105	+		ABIE53_001435	0.60	-0.3
1,604,106	-		ABIE53_001435	0.61	-0.4
1,604,106	-		ABIE53_001435	0.61	+2.5
1,604,106	-		ABIE53_001435	0.61	+0.1
1,604,130	+		ABIE53_001435	0.67	+0.8
1,604,130	+		ABIE53_001435	0.67	-0.6
1,604,131	-		ABIE53_001435	0.68	+0.5
1,604,131	-		ABIE53_001435	0.68	+0.4
1,604,145	+		ABIE53_001435	0.71	-1.5
1,604,145	+		ABIE53_001435	0.71	+0.2
1,604,145	+		ABIE53_001435	0.71	-1.3
1,604,145	+		ABIE53_001435	0.71	-0.5
1,604,145	+		ABIE53_001435	0.71	-0.5
1,604,145	+		ABIE53_001435	0.71	-0.2
1,604,145	+		ABIE53_001435	0.71	-0.1
1,604,146	-		ABIE53_001435	0.72	-0.3
1,604,146	-		ABIE53_001435	0.72	+0.0
1,604,146	-		ABIE53_001435	0.72	-0.4
1,604,146	-		ABIE53_001435	0.72	-0.9
1,604,146	-		ABIE53_001435	0.72	-0.4
1,604,146	-		ABIE53_001435	0.72	+0.7
1,604,146	-		ABIE53_001435	0.72	+0.9
1,604,146	-		ABIE53_001435	0.72	+0.2
1,604,147	+		ABIE53_001435	0.72	-0.6
1,604,147	+		ABIE53_001435	0.72	-0.3
1,604,147	+		ABIE53_001435	0.72	-1.0
1,604,147	+		ABIE53_001435	0.72	+0.3
1,604,147	+		ABIE53_001435	0.72	-0.8
1,604,147	+		ABIE53_001435	0.72	+0.1
1,604,147	+		ABIE53_001435	0.72	+1.6
1,604,147	+		ABIE53_001435	0.72	-1.6
1,604,147	+		ABIE53_001435	0.72	-0.4
1,604,147	+		ABIE53_001435	0.72	+1.5
1,604,147	+		ABIE53_001435	0.72	+0.2
1,604,147	+		ABIE53_001435	0.72	-0.1
1,604,147	+		ABIE53_001435	0.72	-0.2
1,604,147	+		ABIE53_001435	0.72	-0.4
1,604,147	+		ABIE53_001435	0.72	-1.2
1,604,147	+		ABIE53_001435	0.72	-0.7
1,604,148	-		ABIE53_001435	0.72	+1.2
1,604,148	-		ABIE53_001435	0.72	-0.1
1,604,148	-		ABIE53_001435	0.72	-0.0
1,604,148	-		ABIE53_001435	0.72	+0.4
1,604,148	-		ABIE53_001435	0.72	-3.2
1,604,148	-		ABIE53_001435	0.72	-0.1
1,604,148	-		ABIE53_001435	0.72	-0.1
1,604,228	+				-0.1
1,604,228	+				-0.4
1,604,228	+				+0.9
1,604,228	+				-1.7
1,604,228	+				-0.2
1,604,228	+				-1.0
1,604,229	-				-0.2
1,604,229	-				-0.4
1,604,229	-				+0.7
1,604,229	-				+0.8
1,604,231	+				+0.8
1,604,231	+				+0.4
1,604,231	+				+0.3
1,604,231	+				-0.4
1,604,231	+				-1.2
1,604,231	+				-0.7
1,604,232	-				-0.4
1,604,232	-				-0.5
1,604,250	+				-0.1
1,604,250	+				+0.0
1,604,250	+				-0.8
1,604,250	+				-0.5
1,604,251	-				+0.1
1,604,251	-				-0.1
1,604,379	+				-0.8
1,604,379	+				-0.7
1,604,379	+				-1.8
1,604,380	-				+1.3
1,604,380	-				+0.9
1,604,380	-				+0.5
1,604,380	-				-0.1
1,604,382	+				+0.1
1,604,382	+				-0.5
1,604,382	+				+0.4
1,604,382	+				-0.2
1,604,382	+				+2.1
1,604,382	+				-2.3
1,604,382	+				-2.6
1,604,382	+				-0.2
1,604,382	+				-0.6
1,604,382	+				+1.6
1,604,382	+				+0.6
1,604,382	+				-1.9
1,604,383	-				-0.6
1,604,383	-				-1.3
1,604,383	-				+0.7
1,604,383	-				+1.0
1,604,383	-				-2.0
1,604,383	-				+1.1
1,604,383	-				+0.1
1,604,383	-				+0.8
1,604,383	-				-0.7
1,604,383	-				+0.2
1,604,383	-				-0.5
1,604,383	-				+0.3
1,604,383	-				-0.2
1,604,383	-				-0.9
1,604,517	+				+0.1
1,604,517	+				+1.8
1,604,517	+				-0.7
1,604,517	+				+0.3
1,604,517	+				-0.5
1,604,518	-				-0.7
1,604,518	-				-0.5
1,604,518	-				+1.2
1,604,518	-				+2.3
1,604,518	-				-0.9
1,604,589	+				-0.2
1,604,589	+				-0.4
1,604,590	-				-0.4
1,604,590	-				+1.4
1,604,590	-				-1.6
1,604,590	-				+0.5
1,604,590	-				-0.3
1,604,590	-				-0.5
1,604,629	+				-0.4
1,604,629	+				+0.2
1,604,630	-				-1.0
1,604,630	-				-0.2
1,604,706	+		ABIE53_001436	0.10	+0.4
1,604,706	+		ABIE53_001436	0.10	-0.2
1,604,706	+		ABIE53_001436	0.10	-0.7
1,604,706	+		ABIE53_001436	0.10	-0.6
1,604,706	+		ABIE53_001436	0.10	-0.7
1,604,706	+		ABIE53_001436	0.10	+0.9
1,604,706	+		ABIE53_001436	0.10	-0.1
1,604,707	-		ABIE53_001436	0.10	-0.2
1,604,707	-		ABIE53_001436	0.10	+0.1
1,604,707	-		ABIE53_001436	0.10	-0.6
1,604,787	+		ABIE53_001436	0.15	+0.6