Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005106

Experiment: M9 with 3-methyl-3-butenol 4.5 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with 3-methyl-3-butenol 4.5 g/L
1,354,927	-		ABIE53_005104	0.50	+0.0
1,354,927	-		ABIE53_005104	0.50	-0.6
1,354,927	-		ABIE53_005104	0.50	+0.1
1,355,038	+		ABIE53_005104	0.60	+0.1
1,355,038	+		ABIE53_005104	0.60	-1.7
1,355,038	+		ABIE53_005104	0.60	-1.3
1,355,038	+		ABIE53_005104	0.60	+1.1
1,355,038	+		ABIE53_005104	0.60	-0.7
1,355,038	+		ABIE53_005104	0.60	+0.4
1,355,038	+		ABIE53_005104	0.60	-1.0
1,355,038	+		ABIE53_005104	0.60	-0.7
1,355,038	+		ABIE53_005104	0.60	-1.0
1,355,038	+		ABIE53_005104	0.60	-1.2
1,355,038	+		ABIE53_005104	0.60	-1.5
1,355,038	+		ABIE53_005104	0.60	+1.5
1,355,039	-		ABIE53_005104	0.60	+0.7
1,355,039	-		ABIE53_005104	0.60	-0.2
1,355,039	-		ABIE53_005104	0.60	+0.2
1,355,039	-		ABIE53_005104	0.60	-0.1
1,355,039	-		ABIE53_005104	0.60	-0.3
1,355,039	-		ABIE53_005104	0.60	-0.5
1,355,039	-		ABIE53_005104	0.60	-2.1
1,355,039	-		ABIE53_005104	0.60	+1.4
1,355,039	-		ABIE53_005104	0.60	-0.0
1,355,039	-		ABIE53_005104	0.60	-1.3
1,355,041	+		ABIE53_005104	0.61	-0.1
1,355,041	+		ABIE53_005104	0.61	+0.2
1,355,041	+		ABIE53_005104	0.61	-0.6
1,355,041	+		ABIE53_005104	0.61	-0.5
1,355,041	+		ABIE53_005104	0.61	-1.3
1,355,042	-		ABIE53_005104	0.61	+0.5
1,355,042	-		ABIE53_005104	0.61	+0.2
1,355,042	-		ABIE53_005104	0.61	-0.1
1,355,042	-		ABIE53_005104	0.61	+0.1
1,355,085	+		ABIE53_005104	0.65	+0.3
1,355,086	-		ABIE53_005104	0.65	-0.4
1,355,086	-		ABIE53_005104	0.65	+2.1
1,355,086	-		ABIE53_005104	0.65	-1.1
1,355,114	-		ABIE53_005104	0.68	-0.8
1,355,116	+		ABIE53_005104	0.68	-1.5
1,355,116	+		ABIE53_005104	0.68	-0.2
1,355,116	+		ABIE53_005104	0.68	-1.8
1,355,116	+		ABIE53_005104	0.68	+3.2
1,355,116	+		ABIE53_005104	0.68	-0.6
1,355,117	-		ABIE53_005104	0.68	+2.7
1,355,117	-		ABIE53_005104	0.68	-0.4
1,355,302	+		ABIE53_005104	0.85	-1.2
1,355,302	+		ABIE53_005104	0.85	+1.2
1,355,302	+		ABIE53_005104	0.85	-1.0
1,355,303	-		ABIE53_005104	0.85	-0.5
1,355,347	+		ABIE53_005104	0.89	-0.2
1,355,347	+		ABIE53_005104	0.89	-1.0
1,355,348	-		ABIE53_005104	0.89	-1.1
1,355,348	-		ABIE53_005104	0.89	-0.2
1,355,400	+				+0.4
1,355,518	+				-0.6
1,355,519	-				-0.6
1,355,700	+		ABIE53_005105	0.88	-0.3
1,355,700	+		ABIE53_005105	0.88	+0.3
1,355,700	+		ABIE53_005105	0.88	-0.7
1,355,700	+		ABIE53_005105	0.88	-1.1
1,355,700	+		ABIE53_005105	0.88	-0.7
1,355,700	+		ABIE53_005105	0.88	-0.3
1,355,700	+		ABIE53_005105	0.88	+1.4
1,355,701	-		ABIE53_005105	0.88	+0.5
1,355,701	-		ABIE53_005105	0.88	+0.8
1,355,701	-		ABIE53_005105	0.88	-0.2
1,355,701	-		ABIE53_005105	0.88	-1.2
1,355,701	-		ABIE53_005105	0.88	-0.4
1,355,701	-		ABIE53_005105	0.88	+0.6
1,355,701	-		ABIE53_005105	0.88	+0.2
1,355,701	-		ABIE53_005105	0.88	-0.5
1,355,701	-		ABIE53_005105	0.88	-0.2
1,355,701	-		ABIE53_005105	0.88	+0.9
1,355,701	-		ABIE53_005105	0.88	-1.5
1,355,701	-		ABIE53_005105	0.88	-0.1
1,355,701	-		ABIE53_005105	0.88	+0.3
1,355,701	-		ABIE53_005105	0.88	-1.0
1,355,701	-		ABIE53_005105	0.88	+0.2
1,355,701	-		ABIE53_005105	0.88	+1.4
1,355,701	-		ABIE53_005105	0.88	-0.2
1,355,710	+				+0.0
1,355,711	+				+0.2
1,355,711	+				+0.6
1,355,711	+				-0.3
1,355,711	+				-0.6
1,355,711	+				-0.6
1,355,712	-				+0.8
1,355,712	-				-0.9
1,355,712	-				-0.0
1,355,712	-				+1.0
1,355,712	-				+2.0
1,355,852	+				-2.5
1,355,886	-				-0.9
1,355,948	+				-0.4
1,355,948	+				+0.4
1,355,948	+				+0.5
1,355,948	+				+0.1
1,355,948	+				+0.4
1,355,949	-				-1.5
1,355,985	-		ABIE53_005106	0.14	+0.4
1,355,985	-		ABIE53_005106	0.14	-0.3
1,356,222	-		ABIE53_005106	0.48	-0.2
1,356,222	-		ABIE53_005106	0.48	-0.5
1,356,222	-		ABIE53_005106	0.48	-0.1
1,356,249	+		ABIE53_005106	0.52	-0.2
1,356,263	+		ABIE53_005106	0.54	-0.3
1,356,263	+		ABIE53_005106	0.54	-0.5
1,356,263	+		ABIE53_005106	0.54	+0.1
1,356,263	+		ABIE53_005106	0.54	+1.5
1,356,264	-		ABIE53_005106	0.54	-1.2
1,356,264	-		ABIE53_005106	0.54	-0.6
1,356,264	-		ABIE53_005106	0.54	-0.3
1,356,264	-		ABIE53_005106	0.54	+0.3
1,356,317	+		ABIE53_005106	0.61	+0.2
1,356,317	+		ABIE53_005106	0.61	+1.6
1,356,317	+		ABIE53_005106	0.61	-1.0
1,356,317	+		ABIE53_005106	0.61	-1.2
1,356,456	+		ABIE53_005106	0.81	-0.1
1,356,456	+		ABIE53_005106	0.81	+0.3
1,356,456	+		ABIE53_005106	0.81	+0.1
1,356,456	+		ABIE53_005106	0.81	-0.1
1,356,456	+		ABIE53_005106	0.81	-0.6
1,356,456	+		ABIE53_005106	0.81	+0.3
1,356,456	+		ABIE53_005106	0.81	-0.1
1,356,456	+		ABIE53_005106	0.81	-0.6
1,356,456	+		ABIE53_005106	0.81	-0.5
1,356,456	+		ABIE53_005106	0.81	+0.2
1,356,456	+		ABIE53_005106	0.81	-0.0
1,356,457	-		ABIE53_005106	0.81	+0.3
1,356,457	-		ABIE53_005106	0.81	-2.1
1,356,457	-		ABIE53_005106	0.81	-0.6
1,356,457	-		ABIE53_005106	0.81	-0.5
1,356,457	-		ABIE53_005106	0.81	-0.2
1,356,478	+		ABIE53_005106	0.84	+0.1
1,356,478	+		ABIE53_005106	0.84	+0.2
1,356,478	+		ABIE53_005106	0.84	+1.0
1,356,478	+		ABIE53_005106	0.84	-0.1
1,356,479	-		ABIE53_005106	0.84	-1.5
1,356,479	-		ABIE53_005106	0.84	-0.6
1,356,634	+				+0.0
1,356,634	+				-0.5
1,356,635	-				-1.6
1,356,635	-				+0.1
1,356,635	-				-1.6
1,356,635	-				-1.1
1,356,635	-				-1.3
1,356,669	+				-0.6
1,356,670	-				-1.0
1,356,670	-				-0.5
1,356,769	+				-1.5
1,356,769	+				+0.2
1,356,769	+				+1.1
1,356,769	+				-0.7
1,356,769	+				+0.9
1,356,769	+				-0.2
1,356,769	+				+0.5
1,356,769	+				+1.0
1,356,769	+				+0.2
1,356,769	+				-0.0
1,356,769	+				+0.5
1,356,770	-				-0.9
1,356,770	-				-1.4
1,356,770	-				-0.1
1,356,770	-				-0.8
1,356,770	-				+0.3
1,356,770	-				-0.1
1,356,770	-				-0.2
1,356,770	-				-0.7
1,356,770	-				-1.4
1,356,770	-				-0.8
1,356,770	-				+0.2
1,356,770	-				+0.3
1,356,770	-				-0.9
1,356,773	+				+0.2
1,356,773	+				-0.5
1,356,773	+				-1.2
1,356,773	+				-0.3
1,356,773	+				-0.6
1,356,773	+				-0.3
1,356,773	+				-0.3
1,356,773	+				-0.1
1,356,773	+				+0.4
1,356,773	+				-1.0
1,356,773	+				-1.8
1,356,773	+				+0.2
1,356,773	+				-2.4
1,356,773	+				-1.1
1,356,773	+				-1.6
1,356,773	+				-0.5
1,356,773	+				-0.1
1,356,773	+				-0.2
1,356,773	+				+0.8
1,356,773	+				-0.9
1,356,773	+				-0.3
1,356,773	+				-0.6
1,356,773	+				+0.1
1,356,773	+				-0.2
1,356,773	+				-0.0
1,356,773	+				+0.2
1,356,773	+				-0.5
1,356,773	+				+0.3
1,356,774	-				-0.3
1,356,774	-				+1.5
1,356,774	-				-2.1
1,356,774	-				-1.1
1,356,774	-				-1.0
1,356,774	-				+0.0
1,356,774	-				-0.8
1,356,774	-				-0.6
1,356,774	-				-0.1
1,356,774	-				+0.3
1,356,774	-				+0.2
1,356,774	-				-1.4
1,356,774	-				-0.1
1,356,774	-				+0.7
1,356,774	-				-1.1
1,356,774	-				+0.0
1,356,774	-				+0.9
1,356,774	-				-0.1
1,356,774	-				-0.4
1,356,774	-				-0.4
1,356,774	-				-1.2
1,356,827	+				+0.1
1,356,828	-				+0.3
1,356,828	-				-0.8
1,356,835	+				-0.9
1,356,946	+		ABIE53_005107	0.11	-0.4
1,356,946	+		ABIE53_005107	0.11	+1.4
1,356,946	+		ABIE53_005107	0.11	+0.1
1,356,946	+		ABIE53_005107	0.11	-1.6
1,356,946	+		ABIE53_005107	0.11	+0.5
1,356,946	+		ABIE53_005107	0.11	-1.1
1,356,947	-		ABIE53_005107	0.11	+0.6
1,356,947	-		ABIE53_005107	0.11	-1.6
1,356,947	-		ABIE53_005107	0.11	-0.9
1,356,947	-		ABIE53_005107	0.11	-0.3
1,356,947	-		ABIE53_005107	0.11	-1.0
1,356,947	-		ABIE53_005107	0.11	+1.1
1,356,947	-		ABIE53_005107	0.11	-0.5
1,357,007	-		ABIE53_005107	0.14	+0.2
1,357,008	+		ABIE53_005107	0.14	+0.5
1,357,008	+		ABIE53_005107	0.14	-0.1
1,357,008	+		ABIE53_005107	0.14	+0.4
1,357,008	+		ABIE53_005107	0.14	-0.2
1,357,008	+		ABIE53_005107	0.14	-3.0
1,357,061	+		ABIE53_005107	0.17	-1.3
1,357,062	-		ABIE53_005107	0.17	-0.0
1,357,113	+		ABIE53_005107	0.20	+0.8
1,357,113	+		ABIE53_005107	0.20	+1.3
1,357,114	-		ABIE53_005107	0.20	+0.0
1,357,185	+		ABIE53_005107	0.24	-0.3
1,357,185	+		ABIE53_005107	0.24	-0.1
1,357,185	+		ABIE53_005107	0.24	-0.9
1,357,185	+		ABIE53_005107	0.24	-1.0
1,357,185	+		ABIE53_005107	0.24	-0.4
1,357,185	+		ABIE53_005107	0.24	-0.6
1,357,185	+		ABIE53_005107	0.24	-0.1
1,357,185	+		ABIE53_005107	0.24	+0.0
1,357,185	+		ABIE53_005107	0.24	+0.9
1,357,185	+		ABIE53_005107	0.24	-1.1
1,357,186	-		ABIE53_005107	0.24	-0.5
1,357,186	-		ABIE53_005107	0.24	-0.8
1,357,186	-		ABIE53_005107	0.24	-1.0
1,357,186	-		ABIE53_005107	0.24	-2.0
1,357,186	-		ABIE53_005107	0.24	-0.9
1,357,186	-		ABIE53_005107	0.24	+0.5
1,357,186	-		ABIE53_005107	0.24	+0.6
1,357,186	-		ABIE53_005107	0.24	-1.3
1,357,200	+		ABIE53_005107	0.24	+0.1
1,357,200	+		ABIE53_005107	0.24	+0.1
1,357,201	-		ABIE53_005107	0.24	+0.4
1,357,201	-		ABIE53_005107	0.24	+0.4
1,357,201	-		ABIE53_005107	0.24	+0.1
1,357,209	+		ABIE53_005107	0.25	-0.8
1,357,209	+		ABIE53_005107	0.25	-2.0
1,357,209	+		ABIE53_005107	0.25	-0.7
1,357,209	+		ABIE53_005107	0.25	-0.7
1,357,210	-		ABIE53_005107	0.25	-0.5
1,357,363	+		ABIE53_005107	0.33	+1.4
1,357,363	+		ABIE53_005107	0.33	-0.6
1,357,363	+		ABIE53_005107	0.33	-0.5
1,357,364	-		ABIE53_005107	0.33	-0.8
1,357,364	-		ABIE53_005107	0.33	-0.1
1,357,364	-		ABIE53_005107	0.33	+0.4
1,357,504	+		ABIE53_005107	0.40	+1.0
1,357,504	+		ABIE53_005107	0.40	-0.6
1,357,504	+		ABIE53_005107	0.40	-0.2
1,357,552	-		ABIE53_005107	0.43	+0.4