Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006398

Experiment: R2A with 3-methyl-3-butenol 4.5 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-methyl-3-butenol 4.5 g/L
2,774,667	+				-0.4
2,774,667	+				-0.6
2,774,679	-				+0.0
2,774,689	+				-1.4
2,774,690	-				+0.9
2,774,690	-				+0.4
2,774,690	-				-0.3
2,774,696	-				+0.3
2,774,696	-				+0.1
2,774,741	+				+0.3
2,774,742	-				-0.2
2,774,956	+		ABIE53_006397	0.27	-1.1
2,775,024	+		ABIE53_006397	0.36	+0.3
2,775,024	+		ABIE53_006397	0.36	+0.1
2,775,025	-		ABIE53_006397	0.36	+0.5
2,775,145	-		ABIE53_006397	0.52	-1.0
2,775,325	-		ABIE53_006397	0.76	-1.0
2,775,516	+				+0.9
2,775,517	-				+1.1
2,775,539	+				-0.9
2,775,539	+				-2.3
2,775,552	+				+1.0
2,775,552	+				+0.8
2,775,625	+				+0.1
2,775,666	+				+0.1
2,775,715	-		ABIE53_006398	0.12	+1.7
2,775,736	+		ABIE53_006398	0.14	-0.8
2,775,736	+		ABIE53_006398	0.14	-0.5
2,775,736	+		ABIE53_006398	0.14	+1.1
2,775,737	-		ABIE53_006398	0.14	-0.2
2,776,669	+		ABIE53_006398	0.83	-3.1
2,776,784	-				-0.8
2,777,043	+				+0.1
2,777,046	-				-0.2
2,777,046	-				+0.1
2,777,046	-				+0.6
2,777,091	-				-0.7
2,777,091	-				-0.2
2,777,121	+				+0.2
2,777,155	-				-0.0
2,777,245	+		ABIE53_006399	0.13	+0.6
2,777,391	-		ABIE53_006399	0.23	+0.5
2,777,391	-		ABIE53_006399	0.23	-1.9
2,777,405	+		ABIE53_006399	0.23	-0.3
2,777,405	+		ABIE53_006399	0.23	+2.2
2,777,405	+		ABIE53_006399	0.23	-0.7
2,777,405	+		ABIE53_006399	0.23	+0.9
2,777,406	-		ABIE53_006399	0.24	+0.2
2,777,406	-		ABIE53_006399	0.24	-1.5
2,777,505	-		ABIE53_006399	0.30	+0.3
2,777,505	-		ABIE53_006399	0.30	-2.3
2,777,547	+		ABIE53_006399	0.32	+0.5
2,777,548	-		ABIE53_006399	0.32	-0.1
2,777,549	+		ABIE53_006399	0.33	-0.3
2,777,600	+		ABIE53_006399	0.36	-1.0
2,777,601	-		ABIE53_006399	0.36	+0.9
2,777,621	+		ABIE53_006399	0.37	+0.1