Experiment: Ionizing radiation, 319.06 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3521 and Psest_3522 are separated by 115 nucleotides Psest_3522 and Psest_3523 are separated by 113 nucleotides
Psest_3521: Psest_3521 - H+/gluconate symporter and related permeases, at 3,700,757 to 3,702,148
_3521
Psest_3522: Psest_3522 - 3-hydroxybutyrate dehydrogenase, at 3,702,264 to 3,703,034
_3522
Psest_3523: Psest_3523 - putative thymidine phosphorylase, at 3,703,148 to 3,704,728
_3523
Position (kb)
3702
3703
3704 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3701.390 kb on + strand, within Psest_3521 at 3701.431 kb on + strand, within Psest_3521 at 3702.062 kb on + strand at 3702.062 kb on + strand at 3702.062 kb on + strand at 3702.062 kb on + strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.125 kb on + strand at 3702.125 kb on + strand at 3702.126 kb on - strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.718 kb on - strand, within Psest_3522 at 3702.718 kb on - strand, within Psest_3522 at 3702.718 kb on - strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.833 kb on - strand, within Psest_3522 at 3702.833 kb on - strand, within Psest_3522 at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.118 kb on + strand at 3703.225 kb on + strand at 3703.226 kb on - strand at 3703.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 319.06 Gy, remove 3,701,390 + Psest_3521 0.45 +0.1 3,701,431 + Psest_3521 0.48 +0.7 3,702,062 + -1.2 3,702,062 + -1.2 3,702,062 + +1.2 3,702,062 + +2.2 3,702,063 - -0.6 3,702,063 - +1.2 3,702,063 - +0.1 3,702,063 - -0.5 3,702,063 - +1.3 3,702,125 + -2.9 3,702,125 + +0.2 3,702,126 - +0.2 3,702,128 + -0.3 3,702,128 + -0.7 3,702,128 + -1.7 3,702,128 + +1.7 3,702,128 + -1.7 3,702,129 - +0.5 3,702,129 - +0.5 3,702,129 - +0.8 3,702,129 - -1.0 3,702,129 - -0.4 3,702,718 - Psest_3522 0.59 -1.4 3,702,718 - Psest_3522 0.59 +0.9 3,702,718 - Psest_3522 0.59 -0.7 3,702,832 + Psest_3522 0.74 -1.5 3,702,832 + Psest_3522 0.74 +0.0 3,702,832 + Psest_3522 0.74 -0.9 3,702,833 - Psest_3522 0.74 -1.4 3,702,833 - Psest_3522 0.74 +1.6 3,703,114 + +0.0 3,703,114 + +0.3 3,703,114 + +1.2 3,703,114 + -0.3 3,703,114 + -2.4 3,703,114 + +0.1 3,703,118 + +2.2 3,703,225 + +0.4 3,703,226 - +0.4 3,703,248 - -1.4
Or see this region's nucleotide sequence