Experiment: Ionizing radiation, 319.06 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0990 and Psest_0991 are separated by 85 nucleotides Psest_0991 and Psest_0992 are separated by 65 nucleotides
Psest_0990: Psest_0990 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 1,070,587 to 1,073,478
_0990
Psest_0991: Psest_0991 - Predicted SAM-dependent methyltransferases, at 1,073,564 to 1,074,580
_0991
Psest_0992: Psest_0992 - Uncharacterized protein conserved in bacteria, at 1,074,646 to 1,075,521
_0992
Position (kb)
1073
1074
1075 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1072.790 kb on + strand, within Psest_0990 at 1072.791 kb on - strand, within Psest_0990 at 1072.791 kb on - strand, within Psest_0990 at 1072.951 kb on - strand, within Psest_0990 at 1072.951 kb on - strand, within Psest_0990 at 1072.977 kb on - strand, within Psest_0990 at 1072.989 kb on + strand, within Psest_0990 at 1072.989 kb on + strand, within Psest_0990 at 1072.990 kb on - strand, within Psest_0990 at 1072.990 kb on - strand, within Psest_0990 at 1072.990 kb on - strand, within Psest_0990 at 1072.990 kb on - strand, within Psest_0990 at 1073.162 kb on + strand, within Psest_0990 at 1073.162 kb on + strand, within Psest_0990 at 1073.162 kb on + strand, within Psest_0990 at 1073.162 kb on + strand, within Psest_0990 at 1073.162 kb on + strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.163 kb on - strand, within Psest_0990 at 1073.235 kb on - strand at 1073.325 kb on + strand at 1073.326 kb on - strand at 1073.354 kb on + strand at 1073.355 kb on - strand at 1073.488 kb on + strand at 1073.489 kb on - strand at 1073.515 kb on + strand at 1073.516 kb on - strand at 1073.791 kb on - strand, within Psest_0991 at 1073.852 kb on + strand, within Psest_0991 at 1073.853 kb on - strand, within Psest_0991 at 1073.956 kb on - strand, within Psest_0991 at 1073.956 kb on - strand, within Psest_0991 at 1074.101 kb on - strand, within Psest_0991 at 1074.101 kb on - strand, within Psest_0991 at 1074.102 kb on + strand, within Psest_0991 at 1074.102 kb on + strand, within Psest_0991 at 1074.102 kb on + strand, within Psest_0991 at 1074.127 kb on + strand, within Psest_0991 at 1074.212 kb on + strand, within Psest_0991 at 1074.327 kb on + strand, within Psest_0991 at 1074.598 kb on + strand at 1074.648 kb on - strand at 1074.883 kb on + strand, within Psest_0992 at 1074.883 kb on + strand, within Psest_0992 at 1074.893 kb on - strand, within Psest_0992 at 1074.893 kb on - strand, within Psest_0992 at 1074.893 kb on - strand, within Psest_0992 at 1074.945 kb on - strand, within Psest_0992 at 1074.945 kb on - strand, within Psest_0992 at 1075.019 kb on + strand, within Psest_0992 at 1075.019 kb on + strand, within Psest_0992 at 1075.022 kb on + strand, within Psest_0992 at 1075.023 kb on - strand, within Psest_0992 at 1075.448 kb on + strand at 1075.555 kb on + strand at 1075.558 kb on + strand at 1075.558 kb on + strand at 1075.558 kb on + strand at 1075.558 kb on + strand at 1075.558 kb on + strand at 1075.559 kb on - strand at 1075.559 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 319.06 Gy, remove 1,072,790 + Psest_0990 0.76 -0.5 1,072,791 - Psest_0990 0.76 +1.7 1,072,791 - Psest_0990 0.76 -1.6 1,072,951 - Psest_0990 0.82 -1.9 1,072,951 - Psest_0990 0.82 -0.7 1,072,977 - Psest_0990 0.83 +0.4 1,072,989 + Psest_0990 0.83 -0.6 1,072,989 + Psest_0990 0.83 +0.2 1,072,990 - Psest_0990 0.83 -1.1 1,072,990 - Psest_0990 0.83 +2.1 1,072,990 - Psest_0990 0.83 +0.7 1,072,990 - Psest_0990 0.83 -1.0 1,073,162 + Psest_0990 0.89 -0.4 1,073,162 + Psest_0990 0.89 +2.7 1,073,162 + Psest_0990 0.89 +1.7 1,073,162 + Psest_0990 0.89 -1.2 1,073,162 + Psest_0990 0.89 -0.8 1,073,163 - Psest_0990 0.89 -0.4 1,073,163 - Psest_0990 0.89 -1.4 1,073,163 - Psest_0990 0.89 -1.2 1,073,163 - Psest_0990 0.89 +0.9 1,073,163 - Psest_0990 0.89 +1.2 1,073,163 - Psest_0990 0.89 -0.9 1,073,163 - Psest_0990 0.89 +1.4 1,073,235 - +1.5 1,073,325 + +0.3 1,073,326 - -0.7 1,073,354 + +1.5 1,073,355 - +0.7 1,073,488 + -1.5 1,073,489 - -1.4 1,073,515 + +1.6 1,073,516 - +0.5 1,073,791 - Psest_0991 0.22 -2.5 1,073,852 + Psest_0991 0.28 +0.1 1,073,853 - Psest_0991 0.28 -0.5 1,073,956 - Psest_0991 0.39 -0.1 1,073,956 - Psest_0991 0.39 -1.5 1,074,101 - Psest_0991 0.53 -1.9 1,074,101 - Psest_0991 0.53 -0.4 1,074,102 + Psest_0991 0.53 -0.6 1,074,102 + Psest_0991 0.53 -0.9 1,074,102 + Psest_0991 0.53 -1.0 1,074,127 + Psest_0991 0.55 -0.5 1,074,212 + Psest_0991 0.64 -2.8 1,074,327 + Psest_0991 0.75 -2.0 1,074,598 + +0.9 1,074,648 - -2.0 1,074,883 + Psest_0992 0.27 -2.1 1,074,883 + Psest_0992 0.27 -0.6 1,074,893 - Psest_0992 0.28 -1.1 1,074,893 - Psest_0992 0.28 -0.2 1,074,893 - Psest_0992 0.28 +3.7 1,074,945 - Psest_0992 0.34 -0.0 1,074,945 - Psest_0992 0.34 -0.2 1,075,019 + Psest_0992 0.43 -1.1 1,075,019 + Psest_0992 0.43 -1.1 1,075,022 + Psest_0992 0.43 -0.9 1,075,023 - Psest_0992 0.43 -0.4 1,075,448 + +0.7 1,075,555 + +0.8 1,075,558 + +0.9 1,075,558 + -1.6 1,075,558 + -0.9 1,075,558 + +1.3 1,075,558 + -0.2 1,075,559 - +0.6 1,075,559 - +0.6
Or see this region's nucleotide sequence