Experiment: Ionizing radiation, 319.06 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4115 and Psest_4116 are separated by 15 nucleotides Psest_4116 and Psest_4117 overlap by 4 nucleotides Psest_4117 and Psest_4118 are separated by 10 nucleotides Psest_4118 and Psest_4119 are separated by 151 nucleotides Psest_4119 and Psest_4120 overlap by 1 nucleotides Psest_4120 and Psest_4121 are separated by 12 nucleotides
Psest_4115: Psest_4115 - hypothetical protein, at 4,297,106 to 4,297,477
_4115
Psest_4116: Psest_4116 - hypothetical protein, at 4,297,493 to 4,297,672
_4116
Psest_4117: Psest_4117 - hypothetical protein, at 4,297,669 to 4,297,884
_4117
Psest_4118: Psest_4118 - Bacteriophage coat protein B., at 4,297,895 to 4,298,104
_4118
Psest_4119: Psest_4119 - hypothetical protein, at 4,298,256 to 4,299,749
_4119
Psest_4120: Psest_4120 - Protein of unknown function (DUF2523)., at 4,299,749 to 4,300,075
_4120
Psest_4121: Psest_4121 - Zonula occludens toxin, at 4,300,088 to 4,301,272
_4121
Position (kb)
4298
4299
4300 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4298.084 kb on + strand at 4298.084 kb on + strand at 4298.084 kb on + strand at 4298.084 kb on + strand at 4298.084 kb on + strand at 4298.189 kb on - strand at 4298.189 kb on - strand at 4298.198 kb on - strand at 4298.198 kb on - strand at 4298.255 kb on + strand at 4298.587 kb on - strand, within Psest_4119 at 4298.587 kb on - strand, within Psest_4119 at 4298.664 kb on + strand, within Psest_4119 at 4298.664 kb on + strand, within Psest_4119 at 4298.664 kb on + strand, within Psest_4119 at 4298.664 kb on + strand, within Psest_4119 at 4298.739 kb on + strand, within Psest_4119 at 4298.739 kb on + strand, within Psest_4119 at 4298.739 kb on + strand, within Psest_4119 at 4298.740 kb on - strand, within Psest_4119 at 4298.740 kb on - strand, within Psest_4119 at 4298.814 kb on + strand, within Psest_4119 at 4298.829 kb on + strand, within Psest_4119 at 4299.098 kb on + strand, within Psest_4119 at 4299.203 kb on + strand, within Psest_4119 at 4299.296 kb on + strand, within Psest_4119 at 4299.296 kb on + strand, within Psest_4119 at 4299.296 kb on + strand, within Psest_4119 at 4299.395 kb on + strand, within Psest_4119 at 4300.185 kb on - strand at 4300.185 kb on - strand at 4300.185 kb on - strand at 4300.418 kb on + strand, within Psest_4121 at 4300.448 kb on - strand, within Psest_4121 at 4300.599 kb on - strand, within Psest_4121
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 319.06 Gy, remove 4,298,084 + +0.6 4,298,084 + -1.7 4,298,084 + +1.4 4,298,084 + +0.7 4,298,084 + -3.2 4,298,189 - +1.2 4,298,189 - +0.6 4,298,198 - +1.3 4,298,198 - -0.2 4,298,255 + +0.0 4,298,587 - Psest_4119 0.22 -2.5 4,298,587 - Psest_4119 0.22 +0.2 4,298,664 + Psest_4119 0.27 +2.6 4,298,664 + Psest_4119 0.27 +1.1 4,298,664 + Psest_4119 0.27 -0.2 4,298,664 + Psest_4119 0.27 -2.5 4,298,739 + Psest_4119 0.32 +0.9 4,298,739 + Psest_4119 0.32 +0.9 4,298,739 + Psest_4119 0.32 +0.9 4,298,740 - Psest_4119 0.32 +2.3 4,298,740 - Psest_4119 0.32 +0.9 4,298,814 + Psest_4119 0.37 +1.2 4,298,829 + Psest_4119 0.38 -1.6 4,299,098 + Psest_4119 0.56 +0.9 4,299,203 + Psest_4119 0.63 +1.6 4,299,296 + Psest_4119 0.70 -0.1 4,299,296 + Psest_4119 0.70 +0.2 4,299,296 + Psest_4119 0.70 -0.1 4,299,395 + Psest_4119 0.76 +0.3 4,300,185 - +2.5 4,300,185 - +0.3 4,300,185 - -0.9 4,300,418 + Psest_4121 0.28 -0.6 4,300,448 - Psest_4121 0.30 -0.1 4,300,599 - Psest_4121 0.43 -1.0
Or see this region's nucleotide sequence