Experiment: Ionizing radiation, 319.06 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2181 and Psest_2182 are separated by 175 nucleotides Psest_2182 and Psest_2183 are separated by 217 nucleotides Psest_2183 and Psest_2184 are separated by 19 nucleotides
Psest_2181: Psest_2181 - Protein of unknown function (DUF1615)., at 2,338,175 to 2,339,341
_2181
Psest_2182: Psest_2182 - Protein of unknown function (DUF2790)., at 2,339,517 to 2,339,819
_2182
Psest_2183: Psest_2183 - Transcriptional regulator, at 2,340,037 to 2,340,972
_2183
Psest_2184: Psest_2184 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 2,340,992 to 2,342,464
_2184
Position (kb)
2340
2341 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2339.097 kb on + strand, within Psest_2181 at 2339.097 kb on + strand, within Psest_2181 at 2339.097 kb on + strand, within Psest_2181 at 2339.097 kb on + strand, within Psest_2181 at 2339.098 kb on - strand, within Psest_2181 at 2339.098 kb on - strand, within Psest_2181 at 2339.098 kb on - strand, within Psest_2181 at 2339.098 kb on - strand, within Psest_2181 at 2339.380 kb on + strand at 2339.380 kb on + strand at 2339.381 kb on - strand at 2339.551 kb on + strand, within Psest_2182 at 2339.552 kb on - strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.587 kb on + strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.588 kb on - strand, within Psest_2182 at 2339.628 kb on + strand, within Psest_2182 at 2339.628 kb on + strand, within Psest_2182 at 2339.628 kb on + strand, within Psest_2182 at 2339.628 kb on + strand, within Psest_2182 at 2339.628 kb on + strand, within Psest_2182 at 2339.629 kb on - strand, within Psest_2182 at 2339.629 kb on - strand, within Psest_2182 at 2339.671 kb on + strand, within Psest_2182 at 2339.672 kb on - strand, within Psest_2182 at 2339.677 kb on + strand, within Psest_2182 at 2339.702 kb on - strand, within Psest_2182 at 2339.757 kb on + strand, within Psest_2182 at 2339.757 kb on + strand, within Psest_2182 at 2339.758 kb on - strand, within Psest_2182 at 2339.852 kb on + strand at 2339.852 kb on + strand at 2339.852 kb on + strand at 2339.943 kb on - strand at 2340.245 kb on + strand, within Psest_2183 at 2340.245 kb on + strand, within Psest_2183 at 2340.245 kb on + strand, within Psest_2183 at 2340.245 kb on + strand, within Psest_2183 at 2340.245 kb on + strand, within Psest_2183 at 2340.245 kb on + strand, within Psest_2183 at 2340.632 kb on + strand, within Psest_2183 at 2340.633 kb on - strand, within Psest_2183 at 2340.633 kb on - strand, within Psest_2183 at 2340.678 kb on + strand, within Psest_2183 at 2340.679 kb on - strand, within Psest_2183 at 2340.978 kb on - strand at 2341.194 kb on + strand, within Psest_2184 at 2341.279 kb on - strand, within Psest_2184 at 2341.710 kb on + strand, within Psest_2184 at 2341.710 kb on + strand, within Psest_2184 at 2341.710 kb on + strand, within Psest_2184 at 2341.711 kb on - strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.911 kb on + strand, within Psest_2184 at 2341.912 kb on - strand, within Psest_2184 at 2341.912 kb on - strand, within Psest_2184 at 2341.912 kb on - strand, within Psest_2184 at 2341.912 kb on - strand, within Psest_2184 at 2341.912 kb on - strand, within Psest_2184 at 2341.912 kb on - strand, within Psest_2184 at 2341.920 kb on - strand, within Psest_2184 at 2341.941 kb on - strand, within Psest_2184
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 319.06 Gy, remove 2,339,097 + Psest_2181 0.79 +0.3 2,339,097 + Psest_2181 0.79 +1.3 2,339,097 + Psest_2181 0.79 +0.5 2,339,097 + Psest_2181 0.79 +0.3 2,339,098 - Psest_2181 0.79 +1.4 2,339,098 - Psest_2181 0.79 +1.0 2,339,098 - Psest_2181 0.79 -1.8 2,339,098 - Psest_2181 0.79 -1.5 2,339,380 + +1.4 2,339,380 + -0.5 2,339,381 - -1.0 2,339,551 + Psest_2182 0.11 +0.6 2,339,552 - Psest_2182 0.12 -2.5 2,339,587 + Psest_2182 0.23 -0.8 2,339,587 + Psest_2182 0.23 +1.2 2,339,587 + Psest_2182 0.23 +1.5 2,339,587 + Psest_2182 0.23 -0.4 2,339,587 + -1.8 2,339,587 + Psest_2182 0.23 -2.3 2,339,587 + Psest_2182 0.23 +1.7 2,339,587 + Psest_2182 0.23 -1.8 2,339,587 + Psest_2182 0.23 -0.1 2,339,587 + Psest_2182 0.23 +0.5 2,339,587 + Psest_2182 0.23 +0.5 2,339,587 + Psest_2182 0.23 -0.1 2,339,588 - Psest_2182 0.23 +2.3 2,339,588 - Psest_2182 0.23 -0.2 2,339,588 - Psest_2182 0.23 +0.5 2,339,588 - Psest_2182 0.23 -0.3 2,339,588 - Psest_2182 0.23 -0.8 2,339,588 - Psest_2182 0.23 +0.0 2,339,588 - Psest_2182 0.23 -0.1 2,339,588 - Psest_2182 0.23 -1.2 2,339,588 - Psest_2182 0.23 +1.5 2,339,588 - Psest_2182 0.23 +1.0 2,339,588 - Psest_2182 0.23 -0.2 2,339,628 + Psest_2182 0.37 +2.4 2,339,628 + Psest_2182 0.37 +0.8 2,339,628 + Psest_2182 0.37 +0.6 2,339,628 + Psest_2182 0.37 -0.8 2,339,628 + Psest_2182 0.37 -0.2 2,339,629 - Psest_2182 0.37 +1.0 2,339,629 - Psest_2182 0.37 -0.8 2,339,671 + Psest_2182 0.51 +0.4 2,339,672 - Psest_2182 0.51 +0.2 2,339,677 + Psest_2182 0.53 -0.5 2,339,702 - Psest_2182 0.61 -0.0 2,339,757 + Psest_2182 0.79 +0.3 2,339,757 + Psest_2182 0.79 -0.7 2,339,758 - Psest_2182 0.80 +1.3 2,339,852 + +2.0 2,339,852 + +0.3 2,339,852 + +1.4 2,339,943 - +2.2 2,340,245 + Psest_2183 0.22 -3.0 2,340,245 + Psest_2183 0.22 -1.1 2,340,245 + Psest_2183 0.22 -1.5 2,340,245 + Psest_2183 0.22 -1.5 2,340,245 + Psest_2183 0.22 -2.1 2,340,245 + Psest_2183 0.22 -0.7 2,340,632 + Psest_2183 0.64 +1.5 2,340,633 - Psest_2183 0.64 +0.7 2,340,633 - Psest_2183 0.64 -1.5 2,340,678 + Psest_2183 0.68 +0.5 2,340,679 - Psest_2183 0.69 -1.3 2,340,978 - -1.4 2,341,194 + Psest_2184 0.14 +0.7 2,341,279 - Psest_2184 0.19 +0.9 2,341,710 + Psest_2184 0.49 -1.3 2,341,710 + Psest_2184 0.49 -2.0 2,341,710 + Psest_2184 0.49 +1.0 2,341,711 - Psest_2184 0.49 +0.5 2,341,911 + Psest_2184 0.62 -1.8 2,341,911 + Psest_2184 0.62 +1.7 2,341,911 + Psest_2184 0.62 +0.1 2,341,911 + Psest_2184 0.62 +1.5 2,341,911 + Psest_2184 0.62 -0.2 2,341,911 + Psest_2184 0.62 -0.6 2,341,911 + Psest_2184 0.62 +0.0 2,341,911 + Psest_2184 0.62 +1.0 2,341,912 - Psest_2184 0.62 +1.2 2,341,912 - Psest_2184 0.62 +0.4 2,341,912 - Psest_2184 0.62 -0.1 2,341,912 - Psest_2184 0.62 -1.5 2,341,912 - Psest_2184 0.62 -0.4 2,341,912 - Psest_2184 0.62 -2.0 2,341,920 - Psest_2184 0.63 +1.1 2,341,941 - Psest_2184 0.64 -0.8
Or see this region's nucleotide sequence