Experiment: Ionizing radiation, 319.06 Gy,
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1651 and Psest_1652 are separated by 71 nucleotides Psest_1652 and Psest_1653 are separated by 0 nucleotides Psest_1653 and Psest_1654 are separated by 158 nucleotides
Psest_1651: Psest_1651 - Superfamily II DNA/RNA helicases, SNF2 family, at 1,756,560 to 1,758,890
_1651
Psest_1652: Psest_1652 - Protein of unknown function (DUF2803)., at 1,758,962 to 1,759,480
_1652
Psest_1653: Psest_1653 - transcription-repair coupling factor (mfd), at 1,759,481 to 1,762,927
_1653
Psest_1654: Psest_1654 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 1,763,086 to 1,764,537
_1654
Position (kb)
1759
1760
1761
1762
1763 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1758.733 kb on + strand at 1758.734 kb on - strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.011 kb on + strand at 1759.012 kb on - strand at 1759.012 kb on - strand at 1759.012 kb on - strand at 1759.012 kb on - strand at 1759.012 kb on - strand at 1759.012 kb on - strand at 1759.077 kb on + strand, within Psest_1652 at 1759.078 kb on - strand, within Psest_1652 at 1759.120 kb on + strand, within Psest_1652 at 1759.120 kb on + strand, within Psest_1652 at 1759.121 kb on - strand, within Psest_1652 at 1759.121 kb on - strand, within Psest_1652 at 1759.121 kb on - strand, within Psest_1652 at 1759.121 kb on - strand, within Psest_1652 at 1759.121 kb on - strand, within Psest_1652 at 1759.122 kb on + strand, within Psest_1652 at 1759.122 kb on + strand, within Psest_1652 at 1759.123 kb on - strand, within Psest_1652 at 1759.123 kb on - strand, within Psest_1652 at 1759.136 kb on + strand, within Psest_1652 at 1759.247 kb on + strand, within Psest_1652 at 1759.247 kb on + strand, within Psest_1652 at 1759.248 kb on - strand, within Psest_1652 at 1759.400 kb on + strand, within Psest_1652 at 1759.400 kb on + strand, within Psest_1652 at 1759.454 kb on + strand at 1759.482 kb on + strand at 1759.482 kb on + strand at 1759.483 kb on - strand at 1759.483 kb on - strand at 1759.483 kb on - strand at 1759.483 kb on - strand at 1759.483 kb on - strand at 1759.483 kb on - strand at 1759.531 kb on + strand at 1759.852 kb on - strand, within Psest_1653 at 1759.852 kb on - strand, within Psest_1653 at 1759.884 kb on + strand, within Psest_1653 at 1759.885 kb on - strand, within Psest_1653 at 1760.006 kb on - strand, within Psest_1653 at 1760.007 kb on + strand, within Psest_1653 at 1760.007 kb on + strand, within Psest_1653 at 1760.007 kb on + strand, within Psest_1653 at 1760.007 kb on + strand, within Psest_1653 at 1760.007 kb on + strand, within Psest_1653 at 1760.008 kb on - strand, within Psest_1653 at 1760.008 kb on - strand, within Psest_1653 at 1760.008 kb on - strand, within Psest_1653 at 1760.008 kb on - strand, within Psest_1653 at 1760.193 kb on + strand, within Psest_1653 at 1760.193 kb on + strand, within Psest_1653 at 1760.193 kb on + strand, within Psest_1653 at 1760.200 kb on - strand, within Psest_1653 at 1760.200 kb on - strand, within Psest_1653 at 1760.200 kb on - strand, within Psest_1653 at 1760.200 kb on - strand, within Psest_1653 at 1760.200 kb on - strand, within Psest_1653 at 1760.490 kb on + strand, within Psest_1653 at 1760.490 kb on + strand, within Psest_1653 at 1760.491 kb on - strand, within Psest_1653 at 1760.491 kb on - strand, within Psest_1653 at 1760.494 kb on - strand, within Psest_1653 at 1760.684 kb on + strand, within Psest_1653 at 1760.684 kb on + strand, within Psest_1653 at 1760.685 kb on - strand, within Psest_1653 at 1760.685 kb on - strand, within Psest_1653 at 1760.723 kb on + strand, within Psest_1653 at 1760.934 kb on + strand, within Psest_1653 at 1760.934 kb on + strand, within Psest_1653 at 1760.934 kb on + strand, within Psest_1653 at 1760.934 kb on + strand, within Psest_1653 at 1760.935 kb on - strand, within Psest_1653 at 1760.935 kb on - strand, within Psest_1653 at 1760.935 kb on - strand, within Psest_1653 at 1760.935 kb on - strand, within Psest_1653 at 1760.935 kb on - strand, within Psest_1653 at 1760.969 kb on + strand, within Psest_1653 at 1761.162 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.216 kb on + strand, within Psest_1653 at 1761.217 kb on - strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.218 kb on + strand, within Psest_1653 at 1761.219 kb on - strand, within Psest_1653 at 1761.219 kb on - strand, within Psest_1653 at 1761.219 kb on - strand, within Psest_1653 at 1761.219 kb on - strand, within Psest_1653 at 1761.219 kb on - strand, within Psest_1653 at 1761.219 kb on - strand, within Psest_1653 at 1761.220 kb on + strand, within Psest_1653 at 1761.220 kb on + strand, within Psest_1653 at 1761.220 kb on + strand, within Psest_1653 at 1761.220 kb on + strand, within Psest_1653 at 1761.221 kb on - strand, within Psest_1653 at 1761.221 kb on - strand, within Psest_1653 at 1761.335 kb on - strand, within Psest_1653 at 1761.335 kb on - strand, within Psest_1653 at 1761.372 kb on + strand, within Psest_1653 at 1761.372 kb on + strand, within Psest_1653 at 1761.372 kb on + strand, within Psest_1653 at 1761.373 kb on - strand, within Psest_1653 at 1761.373 kb on - strand, within Psest_1653 at 1761.394 kb on - strand, within Psest_1653 at 1761.394 kb on - strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.034 kb on + strand, within Psest_1653 at 1762.035 kb on - strand, within Psest_1653 at 1762.035 kb on - strand, within Psest_1653 at 1762.035 kb on - strand, within Psest_1653 at 1762.134 kb on + strand, within Psest_1653 at 1762.134 kb on + strand, within Psest_1653 at 1762.134 kb on + strand, within Psest_1653 at 1762.134 kb on + strand, within Psest_1653 at 1762.135 kb on - strand, within Psest_1653 at 1762.135 kb on - strand, within Psest_1653 at 1762.135 kb on - strand, within Psest_1653 at 1762.149 kb on + strand, within Psest_1653 at 1762.149 kb on + strand, within Psest_1653 at 1762.149 kb on + strand, within Psest_1653 at 1762.150 kb on - strand, within Psest_1653 at 1762.153 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.195 kb on - strand, within Psest_1653 at 1762.458 kb on + strand, within Psest_1653 at 1762.642 kb on - strand at 1762.642 kb on - strand at 1762.689 kb on - strand at 1762.689 kb on - strand at 1762.955 kb on - strand at 1762.970 kb on + strand at 1762.970 kb on + strand at 1762.971 kb on - strand at 1762.971 kb on - strand at 1762.971 kb on - strand at 1762.974 kb on + strand at 1762.975 kb on - strand at 1763.039 kb on + strand at 1763.044 kb on + strand at 1763.044 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 319.06 Gy, remove 1,758,733 + -0.3 1,758,734 - +1.1 1,759,011 + -0.6 1,759,011 + -0.1 1,759,011 + +0.9 1,759,011 + -0.6 1,759,011 + +0.2 1,759,011 + -0.3 1,759,011 + +0.6 1,759,011 + -0.6 1,759,012 - +0.4 1,759,012 - -2.1 1,759,012 - -0.2 1,759,012 - -0.1 1,759,012 - +0.6 1,759,012 - -2.6 1,759,077 + Psest_1652 0.22 -2.8 1,759,078 - Psest_1652 0.22 +2.0 1,759,120 + Psest_1652 0.30 -1.5 1,759,120 + Psest_1652 0.30 -1.4 1,759,121 - Psest_1652 0.31 -2.3 1,759,121 - Psest_1652 0.31 +0.3 1,759,121 - Psest_1652 0.31 -1.1 1,759,121 - Psest_1652 0.31 -1.7 1,759,121 - Psest_1652 0.31 +1.3 1,759,122 + Psest_1652 0.31 -1.6 1,759,122 + Psest_1652 0.31 +0.9 1,759,123 - Psest_1652 0.31 -0.6 1,759,123 - Psest_1652 0.31 -2.1 1,759,136 + Psest_1652 0.34 +1.1 1,759,247 + Psest_1652 0.55 -0.1 1,759,247 + Psest_1652 0.55 -0.3 1,759,248 - Psest_1652 0.55 -0.6 1,759,400 + Psest_1652 0.84 +1.2 1,759,400 + Psest_1652 0.84 +1.4 1,759,454 + +0.9 1,759,482 + -0.9 1,759,482 + +1.7 1,759,483 - +1.4 1,759,483 - -0.4 1,759,483 - -0.8 1,759,483 - +0.9 1,759,483 - +0.2 1,759,483 - +1.2 1,759,531 + -1.5 1,759,852 - Psest_1653 0.11 +1.3 1,759,852 - Psest_1653 0.11 -1.6 1,759,884 + Psest_1653 0.12 -0.5 1,759,885 - Psest_1653 0.12 +0.9 1,760,006 - Psest_1653 0.15 +0.6 1,760,007 + Psest_1653 0.15 +1.9 1,760,007 + Psest_1653 0.15 -0.1 1,760,007 + Psest_1653 0.15 +0.9 1,760,007 + Psest_1653 0.15 -1.6 1,760,007 + Psest_1653 0.15 -1.9 1,760,008 - Psest_1653 0.15 -1.1 1,760,008 - Psest_1653 0.15 -0.1 1,760,008 - Psest_1653 0.15 -2.4 1,760,008 - Psest_1653 0.15 -0.1 1,760,193 + Psest_1653 0.21 +0.9 1,760,193 + Psest_1653 0.21 -1.4 1,760,193 + Psest_1653 0.21 -0.2 1,760,200 - Psest_1653 0.21 -0.1 1,760,200 - Psest_1653 0.21 -2.5 1,760,200 - Psest_1653 0.21 -0.3 1,760,200 - Psest_1653 0.21 +0.9 1,760,200 - Psest_1653 0.21 -1.4 1,760,490 + Psest_1653 0.29 -2.1 1,760,490 + Psest_1653 0.29 -2.1 1,760,491 - Psest_1653 0.29 -1.2 1,760,491 - Psest_1653 0.29 -1.6 1,760,494 - Psest_1653 0.29 -2.4 1,760,684 + Psest_1653 0.35 +1.9 1,760,684 + Psest_1653 0.35 -1.4 1,760,685 - Psest_1653 0.35 -3.8 1,760,685 - Psest_1653 0.35 -1.3 1,760,723 + Psest_1653 0.36 -1.9 1,760,934 + Psest_1653 0.42 -2.6 1,760,934 + Psest_1653 0.42 -2.1 1,760,934 + Psest_1653 0.42 -0.6 1,760,934 + Psest_1653 0.42 -2.2 1,760,935 - Psest_1653 0.42 +0.9 1,760,935 - Psest_1653 0.42 -1.2 1,760,935 - Psest_1653 0.42 -1.2 1,760,935 - Psest_1653 0.42 +3.5 1,760,935 - Psest_1653 0.42 -1.2 1,760,969 + Psest_1653 0.43 +0.4 1,761,162 + Psest_1653 0.49 -2.4 1,761,216 + Psest_1653 0.50 -0.6 1,761,216 + Psest_1653 0.50 -1.9 1,761,216 + Psest_1653 0.50 +1.3 1,761,216 + Psest_1653 0.50 -1.4 1,761,216 + Psest_1653 0.50 +1.9 1,761,216 + Psest_1653 0.50 -1.5 1,761,216 + Psest_1653 0.50 +1.3 1,761,217 - Psest_1653 0.50 -1.6 1,761,218 + Psest_1653 0.50 -0.8 1,761,218 + Psest_1653 0.50 -1.4 1,761,218 + Psest_1653 0.50 -1.8 1,761,218 + Psest_1653 0.50 -0.5 1,761,218 + Psest_1653 0.50 +0.5 1,761,218 + Psest_1653 0.50 -1.5 1,761,218 + Psest_1653 0.50 -0.6 1,761,218 + Psest_1653 0.50 -0.6 1,761,219 - Psest_1653 0.50 +1.9 1,761,219 - Psest_1653 0.50 +0.1 1,761,219 - Psest_1653 0.50 -1.1 1,761,219 - Psest_1653 0.50 +0.9 1,761,219 - Psest_1653 0.50 -2.2 1,761,219 - Psest_1653 0.50 -0.1 1,761,220 + Psest_1653 0.50 +0.1 1,761,220 + Psest_1653 0.50 +0.4 1,761,220 + Psest_1653 0.50 -0.1 1,761,220 + Psest_1653 0.50 +2.9 1,761,221 - Psest_1653 0.50 +0.4 1,761,221 - Psest_1653 0.50 -2.2 1,761,335 - Psest_1653 0.54 -0.1 1,761,335 - Psest_1653 0.54 -0.2 1,761,372 + Psest_1653 0.55 -0.6 1,761,372 + Psest_1653 0.55 -0.1 1,761,372 + Psest_1653 0.55 -1.4 1,761,373 - Psest_1653 0.55 -1.9 1,761,373 - Psest_1653 0.55 -0.6 1,761,394 - Psest_1653 0.55 -2.4 1,761,394 - Psest_1653 0.55 -0.6 1,762,034 + Psest_1653 0.74 +0.2 1,762,034 + Psest_1653 0.74 -0.1 1,762,034 + Psest_1653 0.74 +0.6 1,762,034 + Psest_1653 0.74 -0.2 1,762,034 + Psest_1653 0.74 -0.3 1,762,034 + Psest_1653 0.74 -2.1 1,762,034 + Psest_1653 0.74 -2.6 1,762,035 - Psest_1653 0.74 -0.9 1,762,035 - Psest_1653 0.74 -0.1 1,762,035 - Psest_1653 0.74 -1.6 1,762,134 + Psest_1653 0.77 -0.1 1,762,134 + Psest_1653 0.77 +0.4 1,762,134 + Psest_1653 0.77 -0.3 1,762,134 + Psest_1653 0.77 -1.4 1,762,135 - Psest_1653 0.77 -1.4 1,762,135 - Psest_1653 0.77 -2.2 1,762,135 - Psest_1653 0.77 +0.9 1,762,149 + Psest_1653 0.77 -1.7 1,762,149 + Psest_1653 0.77 -1.1 1,762,149 + Psest_1653 0.77 +0.6 1,762,150 - Psest_1653 0.77 -1.6 1,762,153 - Psest_1653 0.78 -1.2 1,762,195 - Psest_1653 0.79 -2.1 1,762,195 - Psest_1653 0.79 -1.1 1,762,195 - Psest_1653 0.79 +2.2 1,762,195 - Psest_1653 0.79 -1.4 1,762,195 - Psest_1653 0.79 +0.9 1,762,195 - Psest_1653 0.79 -0.5 1,762,195 - Psest_1653 0.79 -0.1 1,762,458 + Psest_1653 0.86 -2.4 1,762,642 - -2.5 1,762,642 - +1.4 1,762,689 - +0.9 1,762,689 - -0.1 1,762,955 - -0.5 1,762,970 + +0.1 1,762,970 + +1.5 1,762,971 - +0.6 1,762,971 - +1.5 1,762,971 - +0.1 1,762,974 + +0.9 1,762,975 - +2.1 1,763,039 + -0.7 1,763,044 + +1.4 1,763,044 + +2.3
Or see this region's nucleotide sequence