Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3201

Experiment: Ionizing radiation, 0 Gy

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ionizing radiation, 0 Gy
3,371,571	-		Psest_3199	0.61	-0.4
3,371,606	+		Psest_3199	0.65	+0.7
3,371,606	+		Psest_3199	0.65	-0.4
3,371,606	+		Psest_3199	0.65	-0.8
3,371,607	-		Psest_3199	0.65	+0.7
3,371,607	-		Psest_3199	0.65	-0.6
3,371,607	-		Psest_3199	0.65	-1.4
3,371,607	-		Psest_3199	0.65	-0.8
3,371,607	-		Psest_3199	0.65	-0.2
3,371,607	-		Psest_3199	0.65	+0.5
3,371,684	+		Psest_3199	0.75	-0.8
3,371,685	-		Psest_3199	0.75	-1.2
3,371,741	+		Psest_3199	0.83	-1.0
3,371,883	+				-0.8
3,371,898	-				+0.7
3,371,915	+				+0.1
3,371,915	+				-0.9
3,371,915	+				-1.5
3,371,915	+				-1.2
3,371,915	+				+0.4
3,371,916	-				-1.3
3,371,916	-				+0.7
3,371,973	-		Psest_3200	0.11	-1.6
3,372,059	+		Psest_3200	0.26	-0.1
3,372,060	-		Psest_3200	0.26	-0.3
3,372,060	-		Psest_3200	0.26	-0.5
3,372,060	-		Psest_3200	0.26	+3.1
3,372,182	+		Psest_3200	0.48	-0.6
3,372,183	-		Psest_3200	0.48	+0.4
3,372,183	-		Psest_3200	0.48	-0.4
3,372,324	+		Psest_3200	0.72	+0.4
3,372,325	-		Psest_3200	0.73	-0.2
3,372,325	-		Psest_3200	0.73	-0.8
3,372,325	-		Psest_3200	0.73	+1.4
3,372,325	-		Psest_3200	0.73	+1.4
3,372,479	+				+0.2
3,372,539	+				-3.7
3,372,540	-				+0.7
3,372,588	-		Psest_3201	0.12	+2.0
3,372,766	+		Psest_3201	0.35	+0.6
3,372,766	+		Psest_3201	0.35	+0.9
3,372,766	+		Psest_3201	0.35	-0.6
3,372,766	+		Psest_3201	0.35	-0.6
3,372,766	+		Psest_3201	0.35	+0.8
3,372,766	+		Psest_3201	0.35	-0.3
3,372,766	+		Psest_3201	0.35	+0.5
3,372,767	-		Psest_3201	0.35	-2.3
3,372,767	-		Psest_3201	0.35	+0.8
3,372,767	-		Psest_3201	0.35	+0.0
3,372,767	-		Psest_3201	0.35	-0.8
3,372,767	-		Psest_3201	0.35	+1.5
3,372,767	-		Psest_3201	0.35	-2.3
3,372,767	-		Psest_3201	0.35	+1.2
3,372,834	+		Psest_3201	0.43	-2.1
3,372,834	+		Psest_3201	0.43	+0.6
3,373,290	+				+0.6
3,373,290	+				+0.1
3,373,290	+				-1.3
3,373,290	+				-1.0
3,373,290	+				+0.5
3,373,291	-				-1.3
3,373,291	-				-1.5
3,373,291	-				-1.8
3,373,291	-				-0.8
3,373,464	+		Psest_3202	0.19	+0.6
3,373,464	+		Psest_3202	0.19	-0.1
3,373,502	-		Psest_3202	0.27	-2.1
3,373,502	-		Psest_3202	0.27	+0.6
3,373,622	-		Psest_3202	0.53	-1.2
3,373,701	+		Psest_3202	0.71	+0.4
3,373,702	-		Psest_3202	0.71	+1.2
3,373,702	-		Psest_3202	0.71	-0.1
3,373,864	-				-0.2
3,373,914	-				-0.3
3,373,914	-				+0.2
3,373,953	+				-0.2
3,373,953	+				-1.3
3,373,954	-				-1.3
3,374,073	+				-1.8
3,374,229	-		Psest_3203	0.27	+0.9
3,374,229	-		Psest_3203	0.27	+0.2