Experiment: Ionizing radiation, 0 Gy
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2992 and Psest_2993 are separated by 112 nucleotides Psest_2993 and Psest_2994 are separated by 90 nucleotides Psest_2994 and Psest_2995 overlap by 4 nucleotides
Psest_2992: Psest_2992 - Uncharacterized conserved protein, at 3,183,561 to 3,184,010
_2992
Psest_2993: Psest_2993 - hypothetical protein, at 3,184,123 to 3,184,527
_2993
Psest_2994: Psest_2994 - Uncharacterized protein conserved in bacteria, at 3,184,618 to 3,184,911
_2994
Psest_2995: Psest_2995 - ribonuclease D, at 3,184,908 to 3,186,032
_2995
Position (kb)
3184
3185 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3183.707 kb on + strand, within Psest_2992 at 3183.872 kb on - strand, within Psest_2992 at 3183.872 kb on - strand, within Psest_2992 at 3183.872 kb on - strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.875 kb on - strand, within Psest_2992 at 3183.875 kb on - strand, within Psest_2992 at 3183.875 kb on - strand, within Psest_2992 at 3184.016 kb on + strand at 3184.016 kb on + strand at 3184.016 kb on + strand at 3184.016 kb on + strand at 3184.017 kb on - strand at 3184.017 kb on - strand at 3184.489 kb on + strand at 3184.541 kb on - strand at 3184.564 kb on + strand at 3184.583 kb on - strand at 3184.667 kb on + strand, within Psest_2994 at 3184.667 kb on + strand, within Psest_2994 at 3184.667 kb on + strand, within Psest_2994 at 3184.667 kb on + strand, within Psest_2994 at 3184.667 kb on + strand, within Psest_2994 at 3184.667 kb on + strand, within Psest_2994 at 3184.667 kb on + strand, within Psest_2994 at 3184.668 kb on - strand, within Psest_2994 at 3184.668 kb on - strand, within Psest_2994 at 3184.668 kb on - strand, within Psest_2994 at 3184.668 kb on - strand, within Psest_2994 at 3184.668 kb on - strand, within Psest_2994 at 3184.668 kb on - strand, within Psest_2994 at 3184.856 kb on + strand, within Psest_2994 at 3184.857 kb on - strand, within Psest_2994 at 3184.857 kb on - strand, within Psest_2994 at 3184.857 kb on - strand, within Psest_2994 at 3184.862 kb on + strand, within Psest_2994 at 3184.862 kb on + strand, within Psest_2994 at 3184.862 kb on + strand, within Psest_2994 at 3184.862 kb on + strand, within Psest_2994 at 3184.862 kb on + strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.863 kb on - strand, within Psest_2994 at 3184.888 kb on - strand at 3184.888 kb on - strand at 3184.889 kb on + strand at 3184.889 kb on + strand at 3185.576 kb on - strand, within Psest_2995
Per-strain Table
Position Strand Gene LocusTag Fraction Ionizing radiation, 0 Gy remove 3,183,707 + Psest_2992 0.32 -0.1 3,183,872 - Psest_2992 0.69 -0.1 3,183,872 - Psest_2992 0.69 -0.3 3,183,872 - Psest_2992 0.69 -2.1 3,183,874 + Psest_2992 0.70 -0.8 3,183,874 + Psest_2992 0.70 -2.3 3,183,874 + Psest_2992 0.70 +1.0 3,183,874 + Psest_2992 0.70 +0.1 3,183,874 + Psest_2992 0.70 -0.2 3,183,874 + Psest_2992 0.70 +1.6 3,183,875 - Psest_2992 0.70 -3.3 3,183,875 - Psest_2992 0.70 +1.1 3,183,875 - Psest_2992 0.70 +1.3 3,184,016 + -1.7 3,184,016 + -1.7 3,184,016 + +2.1 3,184,016 + -0.3 3,184,017 - -1.9 3,184,017 - -0.3 3,184,489 + +1.8 3,184,541 - -0.3 3,184,564 + -0.6 3,184,583 - -0.1 3,184,667 + Psest_2994 0.17 -1.1 3,184,667 + Psest_2994 0.17 -0.9 3,184,667 + Psest_2994 0.17 +0.5 3,184,667 + Psest_2994 0.17 +1.1 3,184,667 + Psest_2994 0.17 -1.9 3,184,667 + Psest_2994 0.17 +1.7 3,184,667 + Psest_2994 0.17 -0.7 3,184,668 - Psest_2994 0.17 -0.4 3,184,668 - Psest_2994 0.17 -2.3 3,184,668 - Psest_2994 0.17 +0.7 3,184,668 - Psest_2994 0.17 -0.1 3,184,668 - Psest_2994 0.17 +0.1 3,184,668 - Psest_2994 0.17 +0.8 3,184,856 + Psest_2994 0.81 +0.6 3,184,857 - Psest_2994 0.81 +0.1 3,184,857 - Psest_2994 0.81 -1.4 3,184,857 - Psest_2994 0.81 -1.0 3,184,862 + Psest_2994 0.83 +0.7 3,184,862 + Psest_2994 0.83 -0.6 3,184,862 + Psest_2994 0.83 -1.2 3,184,862 + Psest_2994 0.83 -1.1 3,184,862 + Psest_2994 0.83 -3.1 3,184,863 - Psest_2994 0.83 +0.3 3,184,863 - Psest_2994 0.83 +0.3 3,184,863 - Psest_2994 0.83 +0.5 3,184,863 - Psest_2994 0.83 -0.5 3,184,863 - Psest_2994 0.83 -2.3 3,184,863 - Psest_2994 0.83 +0.4 3,184,863 - Psest_2994 0.83 +0.3 3,184,863 - Psest_2994 0.83 -1.2 3,184,863 - Psest_2994 0.83 -0.0 3,184,863 - Psest_2994 0.83 -0.7 3,184,863 - Psest_2994 0.83 +0.7 3,184,863 - Psest_2994 0.83 +0.2 3,184,888 - -0.3 3,184,888 - -1.7 3,184,889 + +0.3 3,184,889 + -2.1 3,185,576 - Psest_2995 0.59 -2.3
Or see this region's nucleotide sequence