Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20150 and SM_b20151 are separated by 65 nucleotides SM_b20151 and SM_b20152 overlap by 7 nucleotides SM_b20152 and SM_b20153 are separated by 83 nucleotides
SM_b20150: SM_b20150 - inositol monophosphatase, at 165,740 to 166,579
_b20150
SM_b20151: SM_b20151 - hypothetical protein, at 166,645 to 167,262
_b20151
SM_b20152: SM_b20152 - hypothetical protein, at 167,256 to 168,974
_b20152
SM_b20153: SM_b20153 - hypothetical protein, at 169,058 to 170,701
_b20153
Position (kb) 167
168
169 Strain fitness (log2 ratio) -1
0
1 at 166.360 kb on + strand, within SM_b20150 at 166.528 kb on - strand at 166.817 kb on - strand, within SM_b20151 at 166.877 kb on + strand, within SM_b20151 at 166.878 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.950 kb on - strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.491 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.718 kb on + strand, within SM_b20152 at 167.718 kb on + strand, within SM_b20152 at 167.719 kb on - strand, within SM_b20152 at 167.719 kb on - strand, within SM_b20152 at 167.785 kb on - strand, within SM_b20152 at 167.872 kb on - strand, within SM_b20152 at 167.893 kb on - strand, within SM_b20152 at 168.315 kb on - strand, within SM_b20152 at 168.442 kb on - strand, within SM_b20152 at 168.442 kb on - strand, within SM_b20152 at 168.501 kb on + strand, within SM_b20152 at 168.502 kb on - strand, within SM_b20152 at 168.738 kb on + strand, within SM_b20152 at 168.777 kb on - strand, within SM_b20152 at 168.801 kb on + strand, within SM_b20152 at 168.874 kb on + strand at 168.992 kb on + strand at 169.046 kb on + strand at 169.046 kb on + strand at 169.046 kb on + strand at 169.400 kb on - strand, within SM_b20153 at 169.838 kb on + strand, within SM_b20153 at 169.838 kb on + strand, within SM_b20153 at 169.839 kb on - strand, within SM_b20153 at 169.860 kb on + strand, within SM_b20153 at 169.860 kb on + strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 166,360 + SM_b20150 0.74 -0.2 166,528 - +0.6 166,817 - SM_b20151 0.28 -0.5 166,877 + SM_b20151 0.38 +0.8 166,878 - SM_b20151 0.38 +0.1 166,886 - SM_b20151 0.39 -0.3 166,886 - SM_b20151 0.39 -0.2 166,886 - SM_b20151 0.39 -0.0 166,942 + SM_b20151 0.48 -0.3 166,942 + SM_b20151 0.48 +0.5 166,942 + SM_b20151 0.48 +0.0 166,942 + SM_b20151 0.48 +0.4 166,943 - SM_b20151 0.48 +0.4 166,943 - SM_b20151 0.48 +0.3 166,945 + SM_b20151 0.49 -1.4 166,945 + SM_b20151 0.49 +0.3 166,945 + SM_b20151 0.49 +0.0 166,945 + SM_b20151 0.49 -0.7 166,945 + SM_b20151 0.49 +0.4 166,946 - SM_b20151 0.49 +0.4 166,946 - SM_b20151 0.49 -0.6 166,950 - SM_b20151 0.49 +0.4 167,098 + SM_b20151 0.73 -0.4 167,098 + SM_b20151 0.73 +0.0 167,491 - SM_b20152 0.14 +0.6 167,575 - SM_b20152 0.19 +0.8 167,575 - SM_b20152 0.19 -0.1 167,718 + SM_b20152 0.27 +0.5 167,718 + SM_b20152 0.27 +0.2 167,719 - SM_b20152 0.27 -1.2 167,719 - SM_b20152 0.27 +0.6 167,785 - SM_b20152 0.31 -0.1 167,872 - SM_b20152 0.36 +0.2 167,893 - SM_b20152 0.37 +0.6 168,315 - SM_b20152 0.62 +0.6 168,442 - SM_b20152 0.69 -0.4 168,442 - SM_b20152 0.69 +0.7 168,501 + SM_b20152 0.72 +1.2 168,502 - SM_b20152 0.72 +0.2 168,738 + SM_b20152 0.86 +0.4 168,777 - SM_b20152 0.88 +0.2 168,801 + SM_b20152 0.90 +0.2 168,874 + +0.5 168,992 + +0.2 169,046 + +0.5 169,046 + +0.3 169,046 + +0.7 169,400 - SM_b20153 0.21 -0.8 169,838 + SM_b20153 0.47 +0.1 169,838 + SM_b20153 0.47 +0.2 169,839 - SM_b20153 0.48 +0.3 169,860 + SM_b20153 0.49 +0.3 169,860 + SM_b20153 0.49 -0.6 169,861 - SM_b20153 0.49 -0.2 169,861 - SM_b20153 0.49 +0.5 169,861 - SM_b20153 0.49 -0.3 169,861 - SM_b20153 0.49 +0.2
Or see this region's nucleotide sequence