Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20697 and SM_b20698 are separated by 151 nucleotides SM_b20698 and SM_b20699 overlap by 4 nucleotides
SM_b20697: SM_b20697 - peptidase, arginine utilization protein RocB, at 1,496,855 to 1,498,549
_b20697
SM_b20698: SM_b20698 - transporter, at 1,498,701 to 1,500,353
_b20698
SM_b20699: SM_b20699 - protein secretion protein, at 1,500,350 to 1,501,447
_b20699
Position (kb)
1498
1499
1500
1501 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1497.780 kb on + strand, within SM_b20697 at 1497.781 kb on - strand, within SM_b20697 at 1497.822 kb on - strand, within SM_b20697 at 1498.239 kb on + strand, within SM_b20697 at 1498.239 kb on + strand, within SM_b20697 at 1498.239 kb on + strand, within SM_b20697 at 1498.240 kb on - strand, within SM_b20697 at 1498.240 kb on - strand, within SM_b20697 at 1498.479 kb on - strand at 1498.702 kb on + strand at 1498.703 kb on - strand at 1499.098 kb on - strand, within SM_b20698 at 1499.098 kb on - strand, within SM_b20698 at 1499.123 kb on + strand, within SM_b20698 at 1499.687 kb on - strand, within SM_b20698 at 1500.170 kb on - strand, within SM_b20698 at 1500.208 kb on + strand at 1500.208 kb on + strand at 1500.209 kb on - strand at 1500.209 kb on - strand at 1500.209 kb on - strand at 1500.209 kb on - strand at 1500.224 kb on + strand at 1500.286 kb on - strand at 1500.318 kb on + strand at 1500.318 kb on + strand at 1500.319 kb on - strand at 1500.565 kb on - strand, within SM_b20699 at 1500.644 kb on + strand, within SM_b20699 at 1500.644 kb on + strand, within SM_b20699 at 1500.645 kb on - strand, within SM_b20699 at 1500.645 kb on - strand, within SM_b20699 at 1500.645 kb on - strand, within SM_b20699 at 1500.665 kb on - strand, within SM_b20699 at 1500.981 kb on + strand, within SM_b20699 at 1501.247 kb on - strand, within SM_b20699 at 1501.263 kb on + strand, within SM_b20699 at 1501.264 kb on - strand, within SM_b20699
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 1,497,780 + SM_b20697 0.55 -0.1 1,497,781 - SM_b20697 0.55 -0.5 1,497,822 - SM_b20697 0.57 +1.8 1,498,239 + SM_b20697 0.82 +0.1 1,498,239 + SM_b20697 0.82 +0.5 1,498,239 + SM_b20697 0.82 -0.4 1,498,240 - SM_b20697 0.82 +0.3 1,498,240 - SM_b20697 0.82 -0.8 1,498,479 - +0.5 1,498,702 + +0.6 1,498,703 - -0.2 1,499,098 - SM_b20698 0.24 -0.8 1,499,098 - SM_b20698 0.24 -1.2 1,499,123 + SM_b20698 0.26 +0.1 1,499,687 - SM_b20698 0.60 +0.1 1,500,170 - SM_b20698 0.89 -1.8 1,500,208 + -1.0 1,500,208 + +0.7 1,500,209 - +0.1 1,500,209 - +0.9 1,500,209 - -0.3 1,500,209 - -0.2 1,500,224 + +0.6 1,500,286 - -0.3 1,500,318 + -0.0 1,500,318 + -0.7 1,500,319 - +0.1 1,500,565 - SM_b20699 0.20 -0.5 1,500,644 + SM_b20699 0.27 +0.3 1,500,644 + SM_b20699 0.27 -0.2 1,500,645 - SM_b20699 0.27 -1.3 1,500,645 - SM_b20699 0.27 +0.2 1,500,645 - SM_b20699 0.27 +0.5 1,500,665 - SM_b20699 0.29 +0.2 1,500,981 + SM_b20699 0.57 -0.0 1,501,247 - SM_b20699 0.82 +0.7 1,501,263 + SM_b20699 0.83 -0.2 1,501,264 - SM_b20699 0.83 -0.2
Or see this region's nucleotide sequence