Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13700 and BWI76_RS13705 are separated by 105 nucleotides BWI76_RS13705 and BWI76_RS13710 overlap by 1 nucleotides BWI76_RS13710 and BWI76_RS13715 are separated by 9 nucleotides
BWI76_RS13700: BWI76_RS13700 - catechol 1,2-dioxygenase, at 2,858,527 to 2,859,453
_RS13700
BWI76_RS13705: BWI76_RS13705 - Rieske (2Fe-2S) domain-containing protein, at 2,859,559 to 2,860,941
_RS13705
BWI76_RS13710: BWI76_RS13710 - benzoate 1,2-dioxygenase small subunit, at 2,860,941 to 2,861,426
_RS13710
BWI76_RS13715: BWI76_RS13715 - 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit, at 2,861,436 to 2,862,452
_RS13715
Position (kb)
2859
2860
2861 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2858.645 kb on - strand, within BWI76_RS13700 at 2858.665 kb on + strand, within BWI76_RS13700 at 2858.678 kb on + strand, within BWI76_RS13700 at 2858.686 kb on + strand, within BWI76_RS13700 at 2858.688 kb on + strand, within BWI76_RS13700 at 2858.694 kb on - strand, within BWI76_RS13700 at 2858.696 kb on - strand, within BWI76_RS13700 at 2858.745 kb on + strand, within BWI76_RS13700 at 2858.762 kb on + strand, within BWI76_RS13700 at 2858.764 kb on - strand, within BWI76_RS13700 at 2858.772 kb on - strand, within BWI76_RS13700 at 2858.774 kb on + strand, within BWI76_RS13700 at 2858.782 kb on - strand, within BWI76_RS13700 at 2858.787 kb on - strand, within BWI76_RS13700 at 2858.882 kb on - strand, within BWI76_RS13700 at 2858.940 kb on + strand, within BWI76_RS13700 at 2858.950 kb on + strand, within BWI76_RS13700 at 2858.958 kb on - strand, within BWI76_RS13700 at 2858.996 kb on + strand, within BWI76_RS13700 at 2859.041 kb on + strand, within BWI76_RS13700 at 2859.049 kb on - strand, within BWI76_RS13700 at 2859.055 kb on - strand, within BWI76_RS13700 at 2859.056 kb on + strand, within BWI76_RS13700 at 2859.106 kb on - strand, within BWI76_RS13700 at 2859.106 kb on - strand, within BWI76_RS13700 at 2859.106 kb on - strand, within BWI76_RS13700 at 2859.232 kb on + strand, within BWI76_RS13700 at 2859.290 kb on + strand, within BWI76_RS13700 at 2859.311 kb on + strand, within BWI76_RS13700 at 2859.334 kb on - strand, within BWI76_RS13700 at 2859.354 kb on + strand, within BWI76_RS13700 at 2859.382 kb on + strand at 2859.383 kb on + strand at 2859.383 kb on + strand at 2859.391 kb on - strand at 2859.391 kb on - strand at 2859.393 kb on + strand at 2859.393 kb on + strand at 2859.393 kb on + strand at 2859.393 kb on + strand at 2859.393 kb on + strand at 2859.393 kb on + strand at 2859.393 kb on + strand at 2859.402 kb on + strand at 2859.402 kb on + strand at 2859.402 kb on + strand at 2859.402 kb on + strand at 2859.413 kb on + strand at 2859.421 kb on - strand at 2859.421 kb on - strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.428 kb on + strand at 2859.435 kb on + strand at 2859.436 kb on - strand at 2859.440 kb on - strand at 2859.447 kb on + strand at 2859.447 kb on + strand at 2859.447 kb on + strand at 2859.460 kb on + strand at 2859.460 kb on + strand at 2859.540 kb on + strand at 2859.540 kb on + strand at 2859.548 kb on - strand at 2859.557 kb on - strand at 2859.557 kb on - strand at 2859.557 kb on - strand at 2859.719 kb on - strand, within BWI76_RS13705 at 2859.726 kb on - strand, within BWI76_RS13705 at 2859.726 kb on - strand, within BWI76_RS13705 at 2859.739 kb on - strand, within BWI76_RS13705 at 2859.741 kb on + strand, within BWI76_RS13705 at 2859.741 kb on + strand, within BWI76_RS13705 at 2859.741 kb on + strand at 2859.741 kb on + strand at 2859.749 kb on - strand, within BWI76_RS13705 at 2859.749 kb on - strand, within BWI76_RS13705 at 2859.749 kb on - strand, within BWI76_RS13705 at 2859.750 kb on + strand, within BWI76_RS13705 at 2859.756 kb on - strand, within BWI76_RS13705 at 2859.757 kb on + strand, within BWI76_RS13705 at 2859.757 kb on + strand, within BWI76_RS13705 at 2859.765 kb on - strand, within BWI76_RS13705 at 2859.765 kb on - strand, within BWI76_RS13705 at 2859.810 kb on + strand, within BWI76_RS13705 at 2859.817 kb on - strand, within BWI76_RS13705 at 2859.823 kb on + strand, within BWI76_RS13705 at 2859.828 kb on + strand, within BWI76_RS13705 at 2859.828 kb on + strand, within BWI76_RS13705 at 2859.828 kb on - strand, within BWI76_RS13705 at 2859.848 kb on - strand at 2859.896 kb on - strand, within BWI76_RS13705 at 2859.910 kb on + strand, within BWI76_RS13705 at 2859.946 kb on + strand, within BWI76_RS13705 at 2859.954 kb on + strand, within BWI76_RS13705 at 2859.972 kb on - strand, within BWI76_RS13705 at 2859.974 kb on + strand, within BWI76_RS13705 at 2859.974 kb on + strand, within BWI76_RS13705 at 2859.974 kb on + strand, within BWI76_RS13705 at 2859.974 kb on + strand, within BWI76_RS13705 at 2859.974 kb on + strand, within BWI76_RS13705 at 2859.982 kb on - strand, within BWI76_RS13705 at 2859.982 kb on - strand, within BWI76_RS13705 at 2859.982 kb on - strand, within BWI76_RS13705 at 2859.982 kb on - strand, within BWI76_RS13705 at 2859.982 kb on - strand, within BWI76_RS13705 at 2859.982 kb on - strand, within BWI76_RS13705 at 2859.989 kb on + strand, within BWI76_RS13705 at 2859.997 kb on - strand, within BWI76_RS13705 at 2860.049 kb on - strand, within BWI76_RS13705 at 2860.050 kb on + strand, within BWI76_RS13705 at 2860.055 kb on + strand at 2860.136 kb on + strand, within BWI76_RS13705 at 2860.137 kb on + strand, within BWI76_RS13705 at 2860.144 kb on - strand, within BWI76_RS13705 at 2860.154 kb on - strand, within BWI76_RS13705 at 2860.680 kb on + strand, within BWI76_RS13705 at 2860.833 kb on + strand at 2860.933 kb on - strand at 2861.043 kb on + strand, within BWI76_RS13710 at 2861.065 kb on - strand, within BWI76_RS13710 at 2861.295 kb on - strand, within BWI76_RS13710 at 2861.316 kb on - strand, within BWI76_RS13710 at 2861.740 kb on - strand, within BWI76_RS13715 at 2861.740 kb on - strand, within BWI76_RS13715 at 2861.740 kb on - strand, within BWI76_RS13715 at 2861.815 kb on - strand, within BWI76_RS13715 at 2861.902 kb on + strand, within BWI76_RS13715
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days remove 2,858,645 - BWI76_RS13700 0.13 -0.7 2,858,665 + BWI76_RS13700 0.15 +0.1 2,858,678 + BWI76_RS13700 0.16 +0.1 2,858,686 + BWI76_RS13700 0.17 -0.4 2,858,688 + BWI76_RS13700 0.17 -0.5 2,858,694 - BWI76_RS13700 0.18 -0.0 2,858,696 - BWI76_RS13700 0.18 -2.6 2,858,745 + BWI76_RS13700 0.24 +0.1 2,858,762 + BWI76_RS13700 0.25 -0.6 2,858,764 - BWI76_RS13700 0.26 -0.9 2,858,772 - BWI76_RS13700 0.26 -0.7 2,858,774 + BWI76_RS13700 0.27 -0.7 2,858,782 - BWI76_RS13700 0.28 -0.6 2,858,787 - BWI76_RS13700 0.28 +0.2 2,858,882 - BWI76_RS13700 0.38 +0.6 2,858,940 + BWI76_RS13700 0.45 -1.1 2,858,950 + BWI76_RS13700 0.46 -0.6 2,858,958 - BWI76_RS13700 0.46 -1.0 2,858,996 + BWI76_RS13700 0.51 +0.3 2,859,041 + BWI76_RS13700 0.55 -0.2 2,859,049 - BWI76_RS13700 0.56 +0.7 2,859,055 - BWI76_RS13700 0.57 -0.7 2,859,056 + BWI76_RS13700 0.57 +0.2 2,859,106 - BWI76_RS13700 0.62 -0.4 2,859,106 - BWI76_RS13700 0.62 +0.1 2,859,106 - BWI76_RS13700 0.62 -0.6 2,859,232 + BWI76_RS13700 0.76 -1.3 2,859,290 + BWI76_RS13700 0.82 +0.1 2,859,311 + BWI76_RS13700 0.85 +0.0 2,859,334 - BWI76_RS13700 0.87 +0.2 2,859,354 + BWI76_RS13700 0.89 -1.2 2,859,382 + -0.9 2,859,383 + +0.4 2,859,383 + -0.6 2,859,391 - -1.1 2,859,391 - -1.0 2,859,393 + -0.2 2,859,393 + -1.0 2,859,393 + -0.2 2,859,393 + +0.0 2,859,393 + +0.8 2,859,393 + -0.4 2,859,393 + -0.1 2,859,402 + +0.6 2,859,402 + +1.9 2,859,402 + -1.8 2,859,402 + -0.4 2,859,413 + +0.5 2,859,421 - +0.7 2,859,421 - +0.6 2,859,428 + +1.0 2,859,428 + -1.2 2,859,428 + +0.6 2,859,428 + -0.1 2,859,428 + +1.1 2,859,428 + +0.1 2,859,428 + +0.1 2,859,428 + -0.4 2,859,428 + -0.4 2,859,428 + +0.2 2,859,428 + +0.1 2,859,428 + -0.3 2,859,428 + -0.3 2,859,435 + -0.1 2,859,436 - +0.3 2,859,440 - +0.1 2,859,447 + -0.0 2,859,447 + -1.0 2,859,447 + +0.1 2,859,460 + -0.1 2,859,460 + +0.3 2,859,540 + +0.1 2,859,540 + +0.3 2,859,548 - +0.1 2,859,557 - +0.3 2,859,557 - -0.5 2,859,557 - +0.3 2,859,719 - BWI76_RS13705 0.12 +0.1 2,859,726 - BWI76_RS13705 0.12 +0.3 2,859,726 - BWI76_RS13705 0.12 +0.0 2,859,739 - BWI76_RS13705 0.13 -0.4 2,859,741 + BWI76_RS13705 0.13 -0.0 2,859,741 + BWI76_RS13705 0.13 +0.3 2,859,741 + -0.4 2,859,741 + +0.1 2,859,749 - BWI76_RS13705 0.14 +0.3 2,859,749 - BWI76_RS13705 0.14 +2.1 2,859,749 - BWI76_RS13705 0.14 -0.9 2,859,750 + BWI76_RS13705 0.14 +0.1 2,859,756 - BWI76_RS13705 0.14 -0.3 2,859,757 + BWI76_RS13705 0.14 +0.2 2,859,757 + BWI76_RS13705 0.14 +0.2 2,859,765 - BWI76_RS13705 0.15 -0.8 2,859,765 - BWI76_RS13705 0.15 -0.7 2,859,810 + BWI76_RS13705 0.18 -0.0 2,859,817 - BWI76_RS13705 0.19 +0.6 2,859,823 + BWI76_RS13705 0.19 +0.4 2,859,828 + BWI76_RS13705 0.19 +0.1 2,859,828 + BWI76_RS13705 0.19 -0.4 2,859,828 - BWI76_RS13705 0.19 +0.8 2,859,848 - -0.4 2,859,896 - BWI76_RS13705 0.24 +0.8 2,859,910 + BWI76_RS13705 0.25 +0.4 2,859,946 + BWI76_RS13705 0.28 +0.3 2,859,954 + BWI76_RS13705 0.29 -0.5 2,859,972 - BWI76_RS13705 0.30 -0.1 2,859,974 + BWI76_RS13705 0.30 +0.6 2,859,974 + BWI76_RS13705 0.30 -0.4 2,859,974 + BWI76_RS13705 0.30 +0.2 2,859,974 + BWI76_RS13705 0.30 -0.2 2,859,974 + BWI76_RS13705 0.30 +0.3 2,859,982 - BWI76_RS13705 0.31 -1.1 2,859,982 - BWI76_RS13705 0.31 +0.2 2,859,982 - BWI76_RS13705 0.31 +1.7 2,859,982 - BWI76_RS13705 0.31 -0.8 2,859,982 - BWI76_RS13705 0.31 -0.1 2,859,982 - BWI76_RS13705 0.31 +0.5 2,859,989 + BWI76_RS13705 0.31 +0.5 2,859,997 - BWI76_RS13705 0.32 +1.1 2,860,049 - BWI76_RS13705 0.35 -0.3 2,860,050 + BWI76_RS13705 0.36 -0.3 2,860,055 + +0.0 2,860,136 + BWI76_RS13705 0.42 -0.2 2,860,137 + BWI76_RS13705 0.42 +0.6 2,860,144 - BWI76_RS13705 0.42 -0.2 2,860,154 - BWI76_RS13705 0.43 +0.0 2,860,680 + BWI76_RS13705 0.81 +0.4 2,860,833 + +1.2 2,860,933 - +0.0 2,861,043 + BWI76_RS13710 0.21 +0.6 2,861,065 - BWI76_RS13710 0.26 +0.5 2,861,295 - BWI76_RS13710 0.73 -0.1 2,861,316 - BWI76_RS13710 0.77 +1.3 2,861,740 - BWI76_RS13715 0.30 +0.7 2,861,740 - BWI76_RS13715 0.30 -0.2 2,861,740 - BWI76_RS13715 0.30 +0.2 2,861,815 - BWI76_RS13715 0.37 +0.2 2,861,902 + BWI76_RS13715 0.46 +0.8
Or see this region's nucleotide sequence