Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13565 and BWI76_RS13570 are separated by 232 nucleotides BWI76_RS13570 and BWI76_RS13575 are separated by 304 nucleotides
BWI76_RS13565: BWI76_RS13565 - MFS transporter, at 2,827,645 to 2,828,955
_RS13565
BWI76_RS13570: BWI76_RS13570 - mandelate racemase/muconate lactonizing protein, at 2,829,188 to 2,830,384
_RS13570
BWI76_RS13575: BWI76_RS13575 - sugar binding transcriptional regulator, LacI family protein, at 2,830,689 to 2,831,693
_RS13575
Position (kb)
2829
2830
2831 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2828.209 kb on + strand, within BWI76_RS13565 at 2828.209 kb on + strand, within BWI76_RS13565 at 2828.212 kb on - strand, within BWI76_RS13565 at 2828.212 kb on - strand, within BWI76_RS13565 at 2828.217 kb on - strand, within BWI76_RS13565 at 2828.228 kb on - strand, within BWI76_RS13565 at 2828.228 kb on - strand, within BWI76_RS13565 at 2828.263 kb on - strand, within BWI76_RS13565 at 2828.263 kb on - strand, within BWI76_RS13565 at 2828.263 kb on - strand, within BWI76_RS13565 at 2828.263 kb on - strand, within BWI76_RS13565 at 2828.272 kb on + strand, within BWI76_RS13565 at 2828.281 kb on - strand, within BWI76_RS13565 at 2828.307 kb on - strand, within BWI76_RS13565 at 2828.314 kb on + strand, within BWI76_RS13565 at 2828.372 kb on - strand, within BWI76_RS13565 at 2828.383 kb on - strand, within BWI76_RS13565 at 2828.384 kb on - strand, within BWI76_RS13565 at 2828.406 kb on + strand, within BWI76_RS13565 at 2828.414 kb on - strand, within BWI76_RS13565 at 2828.420 kb on - strand, within BWI76_RS13565 at 2828.449 kb on + strand, within BWI76_RS13565 at 2828.498 kb on + strand, within BWI76_RS13565 at 2828.498 kb on + strand, within BWI76_RS13565 at 2828.498 kb on + strand, within BWI76_RS13565 at 2828.498 kb on + strand, within BWI76_RS13565 at 2828.498 kb on + strand at 2828.498 kb on + strand, within BWI76_RS13565 at 2828.500 kb on + strand, within BWI76_RS13565 at 2828.506 kb on - strand, within BWI76_RS13565 at 2828.506 kb on - strand, within BWI76_RS13565 at 2828.508 kb on - strand, within BWI76_RS13565 at 2828.513 kb on + strand, within BWI76_RS13565 at 2828.513 kb on + strand, within BWI76_RS13565 at 2828.513 kb on + strand, within BWI76_RS13565 at 2828.513 kb on + strand, within BWI76_RS13565 at 2828.513 kb on + strand, within BWI76_RS13565 at 2828.515 kb on + strand, within BWI76_RS13565 at 2828.521 kb on - strand, within BWI76_RS13565 at 2828.521 kb on - strand, within BWI76_RS13565 at 2828.523 kb on - strand, within BWI76_RS13565 at 2828.527 kb on + strand, within BWI76_RS13565 at 2828.528 kb on - strand, within BWI76_RS13565 at 2828.571 kb on + strand, within BWI76_RS13565 at 2828.583 kb on - strand, within BWI76_RS13565 at 2828.583 kb on - strand, within BWI76_RS13565 at 2828.590 kb on + strand, within BWI76_RS13565 at 2828.590 kb on + strand, within BWI76_RS13565 at 2828.597 kb on - strand, within BWI76_RS13565 at 2828.598 kb on - strand, within BWI76_RS13565 at 2828.598 kb on - strand, within BWI76_RS13565 at 2828.656 kb on + strand, within BWI76_RS13565 at 2828.656 kb on + strand at 2828.656 kb on + strand, within BWI76_RS13565 at 2828.656 kb on + strand, within BWI76_RS13565 at 2828.656 kb on + strand, within BWI76_RS13565 at 2828.656 kb on + strand, within BWI76_RS13565 at 2828.656 kb on + strand, within BWI76_RS13565 at 2828.658 kb on + strand, within BWI76_RS13565 at 2828.664 kb on - strand, within BWI76_RS13565 at 2828.664 kb on - strand, within BWI76_RS13565 at 2828.664 kb on - strand, within BWI76_RS13565 at 2828.664 kb on - strand, within BWI76_RS13565 at 2828.664 kb on - strand, within BWI76_RS13565 at 2828.666 kb on - strand, within BWI76_RS13565 at 2828.668 kb on + strand, within BWI76_RS13565 at 2828.668 kb on + strand, within BWI76_RS13565 at 2828.669 kb on + strand at 2828.669 kb on + strand, within BWI76_RS13565 at 2828.669 kb on + strand, within BWI76_RS13565 at 2828.670 kb on + strand, within BWI76_RS13565 at 2828.677 kb on - strand, within BWI76_RS13565 at 2828.677 kb on - strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.710 kb on + strand, within BWI76_RS13565 at 2828.711 kb on + strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.718 kb on - strand, within BWI76_RS13565 at 2828.719 kb on - strand, within BWI76_RS13565 at 2828.719 kb on - strand, within BWI76_RS13565 at 2828.719 kb on - strand, within BWI76_RS13565 at 2828.790 kb on + strand, within BWI76_RS13565 at 2828.790 kb on + strand, within BWI76_RS13565 at 2828.797 kb on + strand, within BWI76_RS13565 at 2828.798 kb on - strand, within BWI76_RS13565 at 2828.832 kb on - strand at 2828.852 kb on + strand at 2828.860 kb on + strand at 2828.860 kb on - strand at 2828.862 kb on + strand at 2828.862 kb on + strand at 2828.862 kb on + strand at 2828.862 kb on + strand at 2828.862 kb on + strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.870 kb on - strand at 2828.908 kb on + strand at 2828.967 kb on + strand at 2828.973 kb on - strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.975 kb on + strand at 2828.977 kb on + strand at 2828.977 kb on + strand at 2828.977 kb on + strand at 2828.978 kb on - strand at 2828.983 kb on - strand at 2828.983 kb on - strand at 2828.983 kb on - strand at 2828.983 kb on - strand at 2828.983 kb on - strand at 2828.983 kb on - strand at 2828.984 kb on + strand at 2828.985 kb on - strand at 2828.985 kb on - strand at 2828.985 kb on - strand at 2828.985 kb on - strand at 2828.985 kb on - strand at 2828.988 kb on - strand at 2828.988 kb on - strand at 2828.989 kb on + strand at 2829.004 kb on - strand at 2829.004 kb on - strand at 2829.004 kb on - strand at 2829.021 kb on + strand at 2829.021 kb on + strand at 2829.022 kb on + strand at 2829.022 kb on + strand at 2829.030 kb on + strand at 2829.030 kb on - strand at 2829.041 kb on + strand at 2829.041 kb on + strand at 2829.049 kb on + strand at 2829.049 kb on - strand at 2829.049 kb on - strand at 2829.113 kb on + strand at 2829.148 kb on - strand at 2829.161 kb on - strand at 2829.254 kb on + strand at 2829.254 kb on + strand at 2829.255 kb on - strand at 2829.298 kb on + strand at 2829.396 kb on - strand, within BWI76_RS13570 at 2829.480 kb on + strand, within BWI76_RS13570 at 2829.615 kb on + strand, within BWI76_RS13570 at 2829.695 kb on + strand, within BWI76_RS13570 at 2829.800 kb on - strand, within BWI76_RS13570 at 2829.906 kb on - strand, within BWI76_RS13570 at 2829.995 kb on - strand, within BWI76_RS13570 at 2829.997 kb on + strand, within BWI76_RS13570 at 2830.087 kb on + strand, within BWI76_RS13570 at 2830.957 kb on + strand, within BWI76_RS13575 at 2831.040 kb on + strand, within BWI76_RS13575 at 2831.250 kb on + strand, within BWI76_RS13575 at 2831.250 kb on + strand, within BWI76_RS13575 at 2831.302 kb on + strand, within BWI76_RS13575
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days remove 2,828,209 + BWI76_RS13565 0.43 +0.6 2,828,209 + BWI76_RS13565 0.43 -0.0 2,828,212 - BWI76_RS13565 0.43 +0.3 2,828,212 - BWI76_RS13565 0.43 +0.2 2,828,217 - BWI76_RS13565 0.44 -0.1 2,828,228 - BWI76_RS13565 0.44 +0.4 2,828,228 - BWI76_RS13565 0.44 +0.1 2,828,263 - BWI76_RS13565 0.47 -0.4 2,828,263 - BWI76_RS13565 0.47 +0.1 2,828,263 - BWI76_RS13565 0.47 +1.1 2,828,263 - BWI76_RS13565 0.47 +0.2 2,828,272 + BWI76_RS13565 0.48 -0.8 2,828,281 - BWI76_RS13565 0.49 +0.1 2,828,307 - BWI76_RS13565 0.50 +1.1 2,828,314 + BWI76_RS13565 0.51 +0.4 2,828,372 - BWI76_RS13565 0.55 +0.1 2,828,383 - BWI76_RS13565 0.56 -0.8 2,828,384 - BWI76_RS13565 0.56 -0.5 2,828,406 + BWI76_RS13565 0.58 +1.1 2,828,414 - BWI76_RS13565 0.59 -0.2 2,828,420 - BWI76_RS13565 0.59 +0.1 2,828,449 + BWI76_RS13565 0.61 -0.9 2,828,498 + BWI76_RS13565 0.65 +0.8 2,828,498 + BWI76_RS13565 0.65 -0.9 2,828,498 + BWI76_RS13565 0.65 +0.8 2,828,498 + BWI76_RS13565 0.65 -0.5 2,828,498 + -2.6 2,828,498 + BWI76_RS13565 0.65 +0.1 2,828,500 + BWI76_RS13565 0.65 +1.2 2,828,506 - BWI76_RS13565 0.66 +0.6 2,828,506 - BWI76_RS13565 0.66 +0.2 2,828,508 - BWI76_RS13565 0.66 +1.0 2,828,513 + BWI76_RS13565 0.66 +0.8 2,828,513 + BWI76_RS13565 0.66 -0.4 2,828,513 + BWI76_RS13565 0.66 -0.1 2,828,513 + BWI76_RS13565 0.66 -0.5 2,828,513 + BWI76_RS13565 0.66 +1.6 2,828,515 + BWI76_RS13565 0.66 -0.2 2,828,521 - BWI76_RS13565 0.67 -1.8 2,828,521 - BWI76_RS13565 0.67 -0.5 2,828,523 - BWI76_RS13565 0.67 -0.4 2,828,527 + BWI76_RS13565 0.67 +0.3 2,828,528 - BWI76_RS13565 0.67 -0.3 2,828,571 + BWI76_RS13565 0.71 -0.1 2,828,583 - BWI76_RS13565 0.72 -0.3 2,828,583 - BWI76_RS13565 0.72 -1.5 2,828,590 + BWI76_RS13565 0.72 -1.4 2,828,590 + BWI76_RS13565 0.72 +0.2 2,828,597 - BWI76_RS13565 0.73 -1.0 2,828,598 - BWI76_RS13565 0.73 -0.6 2,828,598 - BWI76_RS13565 0.73 +0.7 2,828,656 + BWI76_RS13565 0.77 -0.1 2,828,656 + -2.0 2,828,656 + BWI76_RS13565 0.77 -0.4 2,828,656 + BWI76_RS13565 0.77 +0.4 2,828,656 + BWI76_RS13565 0.77 +0.1 2,828,656 + BWI76_RS13565 0.77 +0.3 2,828,656 + BWI76_RS13565 0.77 -0.7 2,828,658 + BWI76_RS13565 0.77 -1.0 2,828,664 - BWI76_RS13565 0.78 -3.1 2,828,664 - BWI76_RS13565 0.78 -0.0 2,828,664 - BWI76_RS13565 0.78 -0.3 2,828,664 - BWI76_RS13565 0.78 -1.8 2,828,664 - BWI76_RS13565 0.78 +0.4 2,828,666 - BWI76_RS13565 0.78 -0.0 2,828,668 + BWI76_RS13565 0.78 -0.2 2,828,668 + BWI76_RS13565 0.78 -0.2 2,828,669 + +0.1 2,828,669 + BWI76_RS13565 0.78 +0.2 2,828,669 + BWI76_RS13565 0.78 +0.2 2,828,670 + BWI76_RS13565 0.78 +0.4 2,828,677 - BWI76_RS13565 0.79 +0.2 2,828,677 - BWI76_RS13565 0.79 -0.4 2,828,710 + BWI76_RS13565 0.81 -1.0 2,828,710 + BWI76_RS13565 0.81 +0.9 2,828,710 + BWI76_RS13565 0.81 -0.3 2,828,710 + BWI76_RS13565 0.81 +0.4 2,828,710 + BWI76_RS13565 0.81 -0.5 2,828,710 + BWI76_RS13565 0.81 +1.2 2,828,710 + BWI76_RS13565 0.81 -0.4 2,828,710 + BWI76_RS13565 0.81 -0.8 2,828,710 + BWI76_RS13565 0.81 -0.1 2,828,710 + BWI76_RS13565 0.81 +0.1 2,828,710 + BWI76_RS13565 0.81 -0.1 2,828,710 + BWI76_RS13565 0.81 +0.5 2,828,710 + BWI76_RS13565 0.81 -0.2 2,828,710 + BWI76_RS13565 0.81 +0.3 2,828,710 + BWI76_RS13565 0.81 +0.6 2,828,710 + BWI76_RS13565 0.81 -0.1 2,828,710 + BWI76_RS13565 0.81 +0.4 2,828,710 + BWI76_RS13565 0.81 -0.1 2,828,710 + BWI76_RS13565 0.81 +1.0 2,828,710 + BWI76_RS13565 0.81 -0.4 2,828,710 + BWI76_RS13565 0.81 -0.2 2,828,711 + BWI76_RS13565 0.81 +0.7 2,828,718 - BWI76_RS13565 0.82 -0.4 2,828,718 - BWI76_RS13565 0.82 -0.1 2,828,718 - BWI76_RS13565 0.82 -0.6 2,828,718 - BWI76_RS13565 0.82 -0.3 2,828,718 - BWI76_RS13565 0.82 -0.3 2,828,718 - BWI76_RS13565 0.82 +1.2 2,828,718 - BWI76_RS13565 0.82 -0.1 2,828,718 - BWI76_RS13565 0.82 -0.1 2,828,718 - BWI76_RS13565 0.82 -0.1 2,828,718 - BWI76_RS13565 0.82 +0.7 2,828,718 - BWI76_RS13565 0.82 +0.4 2,828,718 - BWI76_RS13565 0.82 -0.4 2,828,718 - BWI76_RS13565 0.82 -0.1 2,828,718 - BWI76_RS13565 0.82 -0.3 2,828,719 - BWI76_RS13565 0.82 +0.6 2,828,719 - BWI76_RS13565 0.82 +0.1 2,828,719 - BWI76_RS13565 0.82 +0.4 2,828,790 + BWI76_RS13565 0.87 +0.0 2,828,790 + BWI76_RS13565 0.87 -0.0 2,828,797 + BWI76_RS13565 0.88 +1.7 2,828,798 - BWI76_RS13565 0.88 -1.1 2,828,832 - -0.1 2,828,852 + -0.4 2,828,860 + +0.2 2,828,860 - -0.2 2,828,862 + -0.2 2,828,862 + -0.4 2,828,862 + -0.5 2,828,862 + -0.2 2,828,862 + -0.2 2,828,870 - +0.0 2,828,870 - -1.2 2,828,870 - -0.2 2,828,870 - +2.5 2,828,870 - +0.2 2,828,870 - +0.7 2,828,870 - -0.2 2,828,870 - -0.6 2,828,908 + -1.2 2,828,967 + -0.3 2,828,973 - -0.1 2,828,975 + +0.1 2,828,975 + -2.2 2,828,975 + -0.3 2,828,975 + -0.4 2,828,975 + -1.9 2,828,975 + -0.3 2,828,975 + -0.0 2,828,975 + -0.5 2,828,977 + -0.0 2,828,977 + +0.9 2,828,977 + +0.4 2,828,978 - -1.6 2,828,983 - +0.7 2,828,983 - +0.2 2,828,983 - -0.7 2,828,983 - -0.4 2,828,983 - +0.3 2,828,983 - -0.4 2,828,984 + +0.3 2,828,985 - +0.0 2,828,985 - -0.6 2,828,985 - +1.0 2,828,985 - +0.1 2,828,985 - +0.1 2,828,988 - -1.0 2,828,988 - +0.6 2,828,989 + +3.4 2,829,004 - -0.1 2,829,004 - +0.3 2,829,004 - -0.4 2,829,021 + +0.1 2,829,021 + +0.5 2,829,022 + +1.1 2,829,022 + +0.6 2,829,030 + -0.1 2,829,030 - +0.8 2,829,041 + +0.1 2,829,041 + +0.3 2,829,049 + +0.3 2,829,049 - -0.3 2,829,049 - +0.7 2,829,113 + -0.3 2,829,148 - -0.2 2,829,161 - +0.4 2,829,254 + +0.2 2,829,254 + +0.0 2,829,255 - -0.0 2,829,298 + +0.2 2,829,396 - BWI76_RS13570 0.17 +1.9 2,829,480 + BWI76_RS13570 0.24 +0.0 2,829,615 + BWI76_RS13570 0.36 -0.8 2,829,695 + BWI76_RS13570 0.42 +0.5 2,829,800 - BWI76_RS13570 0.51 +0.6 2,829,906 - BWI76_RS13570 0.60 +0.6 2,829,995 - BWI76_RS13570 0.67 -0.1 2,829,997 + BWI76_RS13570 0.68 +0.6 2,830,087 + BWI76_RS13570 0.75 +0.2 2,830,957 + BWI76_RS13575 0.27 -0.2 2,831,040 + BWI76_RS13575 0.35 +0.8 2,831,250 + BWI76_RS13575 0.56 +0.2 2,831,250 + BWI76_RS13575 0.56 -0.2 2,831,302 + BWI76_RS13575 0.61 -0.9
Or see this region's nucleotide sequence