Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06600

Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06590 and BWI76_RS06595 overlap by 1 nucleotidesBWI76_RS06595 and BWI76_RS06600 are separated by 13 nucleotidesBWI76_RS06600 and BWI76_RS06605 are separated by 33 nucleotides BWI76_RS06590: BWI76_RS06590 - multidrug ABC transporter permease/ATP-binding protein, at 1,385,741 to 1,387,519 _RS06590 BWI76_RS06595: BWI76_RS06595 - hypothetical protein, at 1,387,519 to 1,387,749 _RS06595 BWI76_RS06600: BWI76_RS06600 - nitrogen regulatory protein P-II 2, at 1,387,763 to 1,388,101 _RS06600 BWI76_RS06605: BWI76_RS06605 - ammonium transporter, at 1,388,135 to 1,389,421 _RS06605 Position (kb) 1387 1388 1389Strain fitness (log2 ratio) -2 -1 0 1at 1386.902 kb on - strand, within BWI76_RS06590at 1387.049 kb on - strand, within BWI76_RS06590at 1387.075 kb on + strand, within BWI76_RS06590at 1387.300 kb on - strand, within BWI76_RS06590at 1387.726 kb on + strand, within BWI76_RS06595at 1387.915 kb on - strand, within BWI76_RS06600at 1387.945 kb on - strand, within BWI76_RS06600at 1388.191 kb on + strandat 1388.199 kb on - strandat 1388.271 kb on - strand, within BWI76_RS06605at 1388.290 kb on + strand, within BWI76_RS06605at 1388.290 kb on + strand, within BWI76_RS06605at 1388.298 kb on - strand, within BWI76_RS06605at 1388.326 kb on + strand, within BWI76_RS06605at 1388.362 kb on + strand, within BWI76_RS06605at 1388.366 kb on + strand, within BWI76_RS06605at 1388.731 kb on - strand, within BWI76_RS06605at 1388.744 kb on - strand, within BWI76_RS06605at 1388.821 kb on + strand, within BWI76_RS06605

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
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1,386,902 - BWI76_RS06590 0.65 -0.4
1,387,049 - BWI76_RS06590 0.74 +0.4
1,387,075 + BWI76_RS06590 0.75 -0.0
1,387,300 - BWI76_RS06590 0.88 -0.3
1,387,726 + BWI76_RS06595 0.90 -2.0
1,387,915 - BWI76_RS06600 0.45 -0.8
1,387,945 - BWI76_RS06600 0.54 +1.2
1,388,191 + +0.8
1,388,199 - -0.8
1,388,271 - BWI76_RS06605 0.11 -1.5
1,388,290 + BWI76_RS06605 0.12 -1.2
1,388,290 + BWI76_RS06605 0.12 -0.9
1,388,298 - BWI76_RS06605 0.13 -1.2
1,388,326 + BWI76_RS06605 0.15 -1.4
1,388,362 + BWI76_RS06605 0.18 -0.7
1,388,366 + BWI76_RS06605 0.18 -2.3
1,388,731 - BWI76_RS06605 0.46 -0.8
1,388,744 - BWI76_RS06605 0.47 -1.0
1,388,821 + BWI76_RS06605 0.53 -0.8

Or see this region's nucleotide sequence