Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18675

Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18665 and BWI76_RS18670 are separated by 12 nucleotidesBWI76_RS18670 and BWI76_RS18675 are separated by 17 nucleotidesBWI76_RS18675 and BWI76_RS18680 are separated by 109 nucleotides BWI76_RS18665: BWI76_RS18665 - hypothetical protein, at 3,870,169 to 3,870,696 _RS18665 BWI76_RS18670: BWI76_RS18670 - hypothetical protein, at 3,870,709 to 3,871,212 _RS18670 BWI76_RS18675: BWI76_RS18675 - fimbrial protein, at 3,871,230 to 3,872,135 _RS18675 BWI76_RS18680: BWI76_RS18680 - EAL domain-containing protein, at 3,872,245 to 3,873,597 _RS18680 Position (kb) 3871 3872 3873Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3870.808 kb on + strand, within BWI76_RS18670at 3870.872 kb on + strand, within BWI76_RS18670at 3871.055 kb on + strand, within BWI76_RS18670at 3871.203 kb on - strandat 3871.203 kb on - strandat 3871.467 kb on - strand, within BWI76_RS18675at 3871.598 kb on + strand, within BWI76_RS18675at 3872.041 kb on + strand, within BWI76_RS18675at 3872.121 kb on - strandat 3872.330 kb on - strandat 3872.465 kb on - strand, within BWI76_RS18680at 3872.624 kb on - strand, within BWI76_RS18680at 3872.914 kb on - strand, within BWI76_RS18680at 3872.991 kb on - strand, within BWI76_RS18680at 3873.036 kb on - strand, within BWI76_RS18680

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days
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3,870,808 + BWI76_RS18670 0.20 +0.7
3,870,872 + BWI76_RS18670 0.32 +1.1
3,871,055 + BWI76_RS18670 0.69 +1.5
3,871,203 - +0.7
3,871,203 - +0.6
3,871,467 - BWI76_RS18675 0.26 -1.7
3,871,598 + BWI76_RS18675 0.41 -5.0
3,872,041 + BWI76_RS18675 0.90 -0.5
3,872,121 - +0.8
3,872,330 - +0.6
3,872,465 - BWI76_RS18680 0.16 +0.6
3,872,624 - BWI76_RS18680 0.28 +0.5
3,872,914 - BWI76_RS18680 0.49 +1.1
3,872,991 - BWI76_RS18680 0.55 +0.0
3,873,036 - BWI76_RS18680 0.58 -2.6

Or see this region's nucleotide sequence