Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09735 and BWI76_RS09740 are separated by 51 nucleotides BWI76_RS09740 and BWI76_RS09745 are separated by 382 nucleotides
BWI76_RS09735: BWI76_RS09735 - formate acetyltransferase, at 2,039,827 to 2,042,109
_RS09735
BWI76_RS09740: BWI76_RS09740 - formate transporter FocA, at 2,042,161 to 2,043,018
_RS09740
BWI76_RS09745: BWI76_RS09745 - 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO, at 2,043,401 to 2,045,161
_RS09745
Position (kb)
2042
2043
2044 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2041.439 kb on - strand, within BWI76_RS09735 at 2041.554 kb on - strand, within BWI76_RS09735 at 2042.081 kb on + strand at 2042.484 kb on + strand, within BWI76_RS09740 at 2042.584 kb on + strand, within BWI76_RS09740 at 2042.672 kb on - strand, within BWI76_RS09740 at 2042.754 kb on + strand, within BWI76_RS09740 at 2042.864 kb on - strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.900 kb on - strand, within BWI76_RS09740 at 2042.902 kb on - strand, within BWI76_RS09740 at 2042.902 kb on - strand, within BWI76_RS09740 at 2042.910 kb on + strand, within BWI76_RS09740 at 2042.976 kb on + strand at 2042.978 kb on + strand at 2043.004 kb on + strand at 2043.018 kb on + strand at 2043.026 kb on - strand at 2043.028 kb on + strand at 2043.030 kb on - strand at 2043.030 kb on - strand at 2043.063 kb on + strand at 2043.063 kb on + strand at 2043.071 kb on - strand at 2043.071 kb on - strand at 2043.071 kb on - strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.097 kb on - strand at 2043.097 kb on - strand at 2043.121 kb on - strand at 2043.345 kb on + strand at 2043.447 kb on + strand at 2043.455 kb on - strand at 2043.530 kb on - strand at 2043.613 kb on - strand, within BWI76_RS09745 at 2043.635 kb on + strand, within BWI76_RS09745 at 2043.689 kb on + strand, within BWI76_RS09745 at 2043.711 kb on - strand, within BWI76_RS09745 at 2043.716 kb on - strand, within BWI76_RS09745 at 2043.778 kb on + strand, within BWI76_RS09745 at 2043.786 kb on - strand, within BWI76_RS09745
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days remove 2,041,439 - BWI76_RS09735 0.71 +0.1 2,041,554 - BWI76_RS09735 0.76 -0.9 2,042,081 + -4.4 2,042,484 + BWI76_RS09740 0.38 -2.7 2,042,584 + BWI76_RS09740 0.49 -0.7 2,042,672 - BWI76_RS09740 0.60 -1.0 2,042,754 + BWI76_RS09740 0.69 -2.0 2,042,864 - BWI76_RS09740 0.82 -0.4 2,042,884 + BWI76_RS09740 0.84 -4.2 2,042,884 + BWI76_RS09740 0.84 -1.1 2,042,884 + BWI76_RS09740 0.84 -1.7 2,042,884 + BWI76_RS09740 0.84 -1.1 2,042,892 - BWI76_RS09740 0.85 -5.2 2,042,892 - BWI76_RS09740 0.85 -3.8 2,042,892 - BWI76_RS09740 0.85 +0.1 2,042,892 - BWI76_RS09740 0.85 -0.8 2,042,892 - BWI76_RS09740 0.85 +0.4 2,042,900 - BWI76_RS09740 0.86 -0.4 2,042,902 - BWI76_RS09740 0.86 -2.3 2,042,902 - BWI76_RS09740 0.86 -0.6 2,042,910 + BWI76_RS09740 0.87 -2.2 2,042,976 + -3.6 2,042,978 + -2.5 2,043,004 + -0.9 2,043,018 + -4.6 2,043,026 - -3.2 2,043,028 + -3.0 2,043,030 - -0.5 2,043,030 - -1.1 2,043,063 + +0.7 2,043,063 + +1.0 2,043,071 - +0.2 2,043,071 - -1.3 2,043,071 - +0.4 2,043,088 + +1.0 2,043,088 + -0.4 2,043,088 + +0.6 2,043,088 + +1.3 2,043,088 + +1.3 2,043,088 + +0.5 2,043,088 + -1.9 2,043,088 + +0.1 2,043,088 + -0.7 2,043,088 + +0.1 2,043,096 - +0.5 2,043,096 - -0.3 2,043,096 - +2.0 2,043,096 - -0.0 2,043,096 - +1.6 2,043,097 - +0.9 2,043,097 - +1.2 2,043,121 - -0.2 2,043,345 + +0.1 2,043,447 + +0.5 2,043,455 - +0.5 2,043,530 - +0.1 2,043,613 - BWI76_RS09745 0.12 +0.8 2,043,635 + BWI76_RS09745 0.13 +0.9 2,043,689 + BWI76_RS09745 0.16 -1.9 2,043,711 - BWI76_RS09745 0.18 -0.0 2,043,716 - BWI76_RS09745 0.18 -0.6 2,043,778 + BWI76_RS09745 0.21 +1.5 2,043,786 - BWI76_RS09745 0.22 +0.7
Or see this region's nucleotide sequence