Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01772 and SMc01773 are separated by 0 nucleotides SMc01773 and SMc01774 are separated by 86 nucleotides SMc01774 and SMc01775 are separated by 413 nucleotides SMc01775 and SMc01776 are separated by 36 nucleotides
SMc01772: SMc01772 - riboflavin biosynthesis protein, at 1,318,702 to 1,319,907
SMc01772
SMc01773: SMc01773 - riboflavin synthase subunit alpha, at 1,319,908 to 1,320,528
SMc01773
SMc01774: SMc01774 - hypothetical protein, at 1,320,615 to 1,320,965
SMc01774
SMc01775: SMc01775 - acetyltransferase, at 1,321,379 to 1,321,918
SMc01775
SMc01776: SMc01776 - auxin-binding protein, at 1,321,955 to 1,322,458
SMc01776
Position (kb)
1320
1321 Strain fitness (log2 ratio)
-1
0
1 at 1319.901 kb on + strand at 1319.901 kb on + strand at 1319.901 kb on + strand at 1320.526 kb on + strand at 1320.625 kb on + strand at 1320.625 kb on + strand at 1320.625 kb on + strand at 1320.780 kb on - strand, within SMc01774 at 1320.806 kb on + strand, within SMc01774 at 1321.075 kb on - strand at 1321.297 kb on + strand at 1321.380 kb on + strand at 1321.380 kb on + strand at 1321.381 kb on - strand at 1321.381 kb on - strand at 1321.433 kb on - strand, within SMc01775 at 1321.433 kb on - strand, within SMc01775 at 1321.434 kb on + strand, within SMc01775 at 1321.435 kb on - strand, within SMc01775 at 1321.435 kb on - strand, within SMc01775 at 1321.738 kb on - strand, within SMc01775 at 1321.738 kb on - strand, within SMc01775 at 1321.791 kb on + strand, within SMc01775 at 1321.791 kb on + strand, within SMc01775 at 1321.792 kb on - strand, within SMc01775 at 1321.807 kb on + strand, within SMc01775 at 1321.808 kb on - strand, within SMc01775 at 1321.809 kb on + strand, within SMc01775 at 1321.845 kb on + strand, within SMc01775 at 1321.846 kb on - strand, within SMc01775 at 1321.846 kb on - strand at 1321.884 kb on - strand at 1321.932 kb on - strand at 1321.950 kb on - strand at 1321.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 1,319,901 + -0.5 1,319,901 + -0.8 1,319,901 + +1.2 1,320,526 + -0.8 1,320,625 + -1.0 1,320,625 + -0.1 1,320,625 + +0.0 1,320,780 - SMc01774 0.47 -1.1 1,320,806 + SMc01774 0.54 -0.3 1,321,075 - +0.1 1,321,297 + -0.4 1,321,380 + +0.0 1,321,380 + +0.2 1,321,381 - -1.6 1,321,381 - -0.8 1,321,433 - SMc01775 0.10 -0.1 1,321,433 - SMc01775 0.10 +0.3 1,321,434 + SMc01775 0.10 +0.1 1,321,435 - SMc01775 0.10 -0.0 1,321,435 - SMc01775 0.10 -0.5 1,321,738 - SMc01775 0.66 -0.8 1,321,738 - SMc01775 0.66 -0.9 1,321,791 + SMc01775 0.76 +0.1 1,321,791 + SMc01775 0.76 +0.5 1,321,792 - SMc01775 0.76 -0.8 1,321,807 + SMc01775 0.79 -0.3 1,321,808 - SMc01775 0.79 -0.0 1,321,809 + SMc01775 0.80 +0.6 1,321,845 + SMc01775 0.86 -0.1 1,321,846 - SMc01775 0.86 +0.1 1,321,846 - -0.2 1,321,884 - +0.6 1,321,932 - -0.6 1,321,950 - -0.5 1,321,950 - +1.3
Or see this region's nucleotide sequence