Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1046 and SMa1050 are separated by 490 nucleotides SMa1050 and SMa1052 overlap by 4 nucleotides SMa1052 and SMa1053 overlap by 4 nucleotides SMa1053 and SMa1056 overlap by 4 nucleotides
SMa1046: SMa1046 - adenylate cyclase, at 574,539 to 575,606
SMa1046
SMa1050: SMa1050 - hypothetical protein, at 576,097 to 576,642
SMa1050
SMa1052: SMa1052 - hypothetical protein, at 576,639 to 577,070
SMa1052
SMa1053: SMa1053 - hypothetical protein, at 577,067 to 577,477
SMa1053
SMa1056: SMa1056 - transcriptional regulator, at 577,474 to 577,821
SMa1056
Position (kb) 576
577 Strain fitness (log2 ratio) -1
0
1 at 575.177 kb on - strand, within SMa1046 at 575.244 kb on + strand, within SMa1046 at 575.467 kb on + strand, within SMa1046 at 575.468 kb on - strand, within SMa1046 at 575.468 kb on - strand, within SMa1046 at 575.468 kb on - strand, within SMa1046 at 575.513 kb on + strand at 575.513 kb on + strand at 575.516 kb on + strand at 575.517 kb on - strand at 575.517 kb on - strand at 575.604 kb on + strand at 575.605 kb on - strand at 575.679 kb on + strand at 575.679 kb on + strand at 575.775 kb on - strand at 575.807 kb on - strand at 576.027 kb on + strand at 576.028 kb on - strand at 576.188 kb on + strand, within SMa1050 at 576.207 kb on + strand, within SMa1050 at 576.243 kb on - strand, within SMa1050 at 576.265 kb on + strand, within SMa1050 at 576.265 kb on + strand, within SMa1050 at 576.266 kb on - strand, within SMa1050 at 576.266 kb on - strand, within SMa1050 at 576.335 kb on - strand, within SMa1050 at 576.398 kb on - strand, within SMa1050 at 576.537 kb on - strand, within SMa1050 at 576.702 kb on + strand, within SMa1052 at 577.317 kb on - strand, within SMa1053 at 577.387 kb on + strand, within SMa1053 at 577.636 kb on + strand, within SMa1056 at 577.637 kb on - strand, within SMa1056
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 575,177 - SMa1046 0.60 -0.2 575,244 + SMa1046 0.66 -1.1 575,467 + SMa1046 0.87 -0.1 575,468 - SMa1046 0.87 +0.8 575,468 - SMa1046 0.87 -1.0 575,468 - SMa1046 0.87 -0.2 575,513 + -0.6 575,513 + -0.8 575,516 + +0.7 575,517 - -0.1 575,517 - -0.4 575,604 + +0.1 575,605 - +1.0 575,679 + -0.1 575,679 + +0.3 575,775 - -0.2 575,807 - +0.0 576,027 + -0.5 576,028 - +0.3 576,188 + SMa1050 0.17 -0.7 576,207 + SMa1050 0.20 -0.2 576,243 - SMa1050 0.27 +0.7 576,265 + SMa1050 0.31 -0.5 576,265 + SMa1050 0.31 -1.0 576,266 - SMa1050 0.31 +0.7 576,266 - SMa1050 0.31 -0.9 576,335 - SMa1050 0.44 -0.8 576,398 - SMa1050 0.55 -0.4 576,537 - SMa1050 0.81 -1.3 576,702 + SMa1052 0.15 +0.3 577,317 - SMa1053 0.61 -0.2 577,387 + SMa1053 0.78 +0.3 577,636 + SMa1056 0.47 -0.0 577,637 - SMa1056 0.47 -0.9
Or see this region's nucleotide sequence