Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21400 and SM_b21401 are separated by 48 nucleotides SM_b21401 and SM_b21402 are separated by 548 nucleotides
SM_b21400: SM_b21400 - hypothetical protein, at 1,331,585 to 1,331,821
_b21400
SM_b21401: SM_b21401 - hypothetical protein, at 1,331,870 to 1,332,220
_b21401
SM_b21402: SM_b21402 - hypothetical protein, at 1,332,769 to 1,333,932
_b21402
Position (kb)
1332
1333
1334 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1331.828 kb on + strand at 1331.828 kb on + strand at 1331.828 kb on + strand at 1331.829 kb on - strand at 1331.829 kb on - strand at 1331.881 kb on + strand at 1331.882 kb on - strand at 1331.882 kb on - strand at 1331.882 kb on - strand at 1331.882 kb on - strand at 1331.882 kb on - strand at 1331.882 kb on - strand at 1332.000 kb on + strand, within SM_b21401 at 1332.000 kb on + strand, within SM_b21401 at 1332.001 kb on - strand, within SM_b21401 at 1332.005 kb on + strand, within SM_b21401 at 1332.006 kb on - strand, within SM_b21401 at 1332.041 kb on - strand, within SM_b21401 at 1332.172 kb on + strand, within SM_b21401 at 1332.172 kb on + strand, within SM_b21401 at 1332.217 kb on - strand at 1332.217 kb on - strand at 1332.221 kb on + strand at 1332.221 kb on + strand at 1332.221 kb on + strand at 1332.221 kb on + strand at 1332.221 kb on + strand at 1332.221 kb on + strand at 1332.222 kb on - strand at 1332.222 kb on - strand at 1332.222 kb on - strand at 1332.222 kb on - strand at 1332.222 kb on - strand at 1332.222 kb on - strand at 1332.283 kb on + strand at 1332.284 kb on - strand at 1332.352 kb on + strand at 1332.353 kb on - strand at 1332.455 kb on - strand at 1332.501 kb on + strand at 1332.502 kb on - strand at 1332.507 kb on + strand at 1332.549 kb on - strand at 1332.663 kb on + strand at 1332.664 kb on - strand at 1332.742 kb on - strand at 1332.757 kb on + strand at 1332.786 kb on + strand at 1332.854 kb on - strand at 1332.854 kb on - strand at 1332.854 kb on - strand at 1332.907 kb on + strand, within SM_b21402 at 1332.907 kb on + strand, within SM_b21402 at 1332.907 kb on + strand, within SM_b21402 at 1332.907 kb on + strand, within SM_b21402 at 1332.907 kb on + strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.908 kb on - strand, within SM_b21402 at 1332.909 kb on + strand, within SM_b21402 at 1332.910 kb on - strand, within SM_b21402 at 1332.910 kb on - strand, within SM_b21402 at 1332.934 kb on + strand, within SM_b21402 at 1332.934 kb on + strand, within SM_b21402 at 1332.935 kb on - strand, within SM_b21402 at 1332.935 kb on - strand, within SM_b21402 at 1333.123 kb on + strand, within SM_b21402 at 1333.124 kb on - strand, within SM_b21402 at 1333.124 kb on - strand, within SM_b21402 at 1333.124 kb on - strand, within SM_b21402 at 1333.124 kb on - strand, within SM_b21402 at 1333.124 kb on - strand, within SM_b21402 at 1333.152 kb on + strand, within SM_b21402 at 1333.153 kb on - strand, within SM_b21402 at 1333.229 kb on + strand, within SM_b21402 at 1333.230 kb on - strand, within SM_b21402 at 1333.251 kb on + strand, within SM_b21402 at 1333.258 kb on + strand, within SM_b21402 at 1333.258 kb on + strand, within SM_b21402 at 1333.258 kb on + strand, within SM_b21402 at 1333.284 kb on - strand, within SM_b21402 at 1333.360 kb on + strand, within SM_b21402 at 1333.361 kb on - strand, within SM_b21402 at 1333.523 kb on - strand, within SM_b21402 at 1333.631 kb on + strand, within SM_b21402 at 1333.631 kb on + strand, within SM_b21402 at 1333.632 kb on - strand, within SM_b21402 at 1333.632 kb on - strand, within SM_b21402 at 1333.632 kb on - strand, within SM_b21402 at 1333.632 kb on - strand, within SM_b21402 at 1333.677 kb on - strand, within SM_b21402 at 1333.762 kb on + strand, within SM_b21402 at 1333.786 kb on - strand, within SM_b21402 at 1333.792 kb on + strand, within SM_b21402 at 1333.793 kb on - strand, within SM_b21402 at 1333.793 kb on - strand, within SM_b21402 at 1333.793 kb on - strand, within SM_b21402 at 1333.793 kb on - strand, within SM_b21402 at 1333.798 kb on + strand, within SM_b21402 at 1333.799 kb on - strand, within SM_b21402 at 1333.799 kb on - strand, within SM_b21402 at 1333.834 kb on + strand at 1333.834 kb on + strand at 1333.836 kb on + strand at 1333.836 kb on + strand at 1333.836 kb on + strand at 1333.836 kb on + strand at 1333.836 kb on + strand at 1333.837 kb on - strand at 1333.837 kb on - strand at 1333.948 kb on + strand at 1333.949 kb on - strand at 1333.998 kb on - strand at 1334.025 kb on + strand at 1334.026 kb on - strand at 1334.026 kb on - strand at 1334.038 kb on + strand at 1334.039 kb on - strand at 1334.070 kb on - strand at 1334.106 kb on + strand at 1334.167 kb on + strand at 1334.168 kb on - strand at 1334.224 kb on + strand at 1334.224 kb on + strand at 1334.224 kb on + strand at 1334.225 kb on - strand at 1334.472 kb on + strand at 1334.472 kb on + strand at 1334.657 kb on - strand at 1334.665 kb on - strand at 1334.816 kb on + strand at 1334.817 kb on - strand at 1334.880 kb on + strand at 1334.880 kb on + strand at 1334.880 kb on + strand at 1334.880 kb on + strand at 1334.880 kb on + strand at 1334.881 kb on - strand at 1334.881 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 1,331,828 + -0.4 1,331,828 + -0.3 1,331,828 + -0.0 1,331,829 - -0.3 1,331,829 - -0.0 1,331,881 + -0.1 1,331,882 - -0.1 1,331,882 - +0.1 1,331,882 - -0.2 1,331,882 - -0.2 1,331,882 - -0.3 1,331,882 - +0.4 1,332,000 + SM_b21401 0.37 -0.7 1,332,000 + SM_b21401 0.37 +0.2 1,332,001 - SM_b21401 0.37 -0.0 1,332,005 + SM_b21401 0.38 +0.4 1,332,006 - SM_b21401 0.39 +0.1 1,332,041 - SM_b21401 0.49 +0.2 1,332,172 + SM_b21401 0.86 -0.6 1,332,172 + SM_b21401 0.86 -0.2 1,332,217 - -1.0 1,332,217 - +0.2 1,332,221 + -0.1 1,332,221 + -0.3 1,332,221 + +0.1 1,332,221 + -1.2 1,332,221 + +0.3 1,332,221 + +2.0 1,332,222 - -0.0 1,332,222 - -0.0 1,332,222 - +0.1 1,332,222 - +0.2 1,332,222 - -0.6 1,332,222 - +0.4 1,332,283 + +0.1 1,332,284 - -0.8 1,332,352 + -0.1 1,332,353 - -0.7 1,332,455 - -0.1 1,332,501 + -0.0 1,332,502 - -0.9 1,332,507 + +0.7 1,332,549 - +2.1 1,332,663 + +0.8 1,332,664 - -0.1 1,332,742 - +0.8 1,332,757 + +1.5 1,332,786 + +0.0 1,332,854 - -1.3 1,332,854 - +0.4 1,332,854 - -0.2 1,332,907 + SM_b21402 0.12 -0.9 1,332,907 + SM_b21402 0.12 -0.4 1,332,907 + SM_b21402 0.12 -0.1 1,332,907 + SM_b21402 0.12 -0.7 1,332,907 + SM_b21402 0.12 -0.0 1,332,908 - SM_b21402 0.12 -0.2 1,332,908 - SM_b21402 0.12 -0.9 1,332,908 - SM_b21402 0.12 -0.3 1,332,908 - SM_b21402 0.12 -0.5 1,332,908 - SM_b21402 0.12 -0.6 1,332,908 - SM_b21402 0.12 -0.2 1,332,908 - SM_b21402 0.12 -2.7 1,332,908 - SM_b21402 0.12 -0.2 1,332,909 + SM_b21402 0.12 -1.0 1,332,910 - SM_b21402 0.12 -0.1 1,332,910 - SM_b21402 0.12 -0.4 1,332,934 + SM_b21402 0.14 -0.6 1,332,934 + SM_b21402 0.14 -0.5 1,332,935 - SM_b21402 0.14 +0.1 1,332,935 - SM_b21402 0.14 +0.4 1,333,123 + SM_b21402 0.30 -0.0 1,333,124 - SM_b21402 0.30 -0.0 1,333,124 - SM_b21402 0.30 -0.2 1,333,124 - SM_b21402 0.30 +0.0 1,333,124 - SM_b21402 0.30 -0.2 1,333,124 - SM_b21402 0.30 +1.1 1,333,152 + SM_b21402 0.33 +0.1 1,333,153 - SM_b21402 0.33 -1.4 1,333,229 + SM_b21402 0.40 -0.3 1,333,230 - SM_b21402 0.40 -0.7 1,333,251 + SM_b21402 0.41 -0.4 1,333,258 + SM_b21402 0.42 -1.3 1,333,258 + SM_b21402 0.42 -0.3 1,333,258 + SM_b21402 0.42 -0.6 1,333,284 - SM_b21402 0.44 -0.4 1,333,360 + SM_b21402 0.51 +1.3 1,333,361 - SM_b21402 0.51 -0.6 1,333,523 - SM_b21402 0.65 +1.0 1,333,631 + SM_b21402 0.74 -0.0 1,333,631 + SM_b21402 0.74 -0.1 1,333,632 - SM_b21402 0.74 +0.9 1,333,632 - SM_b21402 0.74 -1.5 1,333,632 - SM_b21402 0.74 -0.2 1,333,632 - SM_b21402 0.74 -0.2 1,333,677 - SM_b21402 0.78 -0.0 1,333,762 + SM_b21402 0.85 +0.3 1,333,786 - SM_b21402 0.87 -0.3 1,333,792 + SM_b21402 0.88 +0.5 1,333,793 - SM_b21402 0.88 -0.2 1,333,793 - SM_b21402 0.88 -1.0 1,333,793 - SM_b21402 0.88 +0.1 1,333,793 - SM_b21402 0.88 +0.0 1,333,798 + SM_b21402 0.88 -0.4 1,333,799 - SM_b21402 0.88 +0.1 1,333,799 - SM_b21402 0.88 -0.3 1,333,834 + +0.0 1,333,834 + -0.1 1,333,836 + -0.5 1,333,836 + +0.3 1,333,836 + +1.0 1,333,836 + +0.3 1,333,836 + +0.1 1,333,837 - -0.1 1,333,837 - -0.0 1,333,948 + -0.2 1,333,949 - -0.2 1,333,998 - -0.2 1,334,025 + +0.5 1,334,026 - -0.0 1,334,026 - -0.1 1,334,038 + -0.2 1,334,039 - -0.4 1,334,070 - -0.4 1,334,106 + -0.1 1,334,167 + -0.1 1,334,168 - -0.0 1,334,224 + +0.4 1,334,224 + +0.3 1,334,224 + +0.7 1,334,225 - -0.1 1,334,472 + -0.2 1,334,472 + -0.8 1,334,657 - -0.5 1,334,665 - -0.3 1,334,816 + +0.5 1,334,817 - -1.6 1,334,880 + +1.2 1,334,880 + +0.1 1,334,880 + -0.2 1,334,880 + -0.9 1,334,880 + +0.1 1,334,881 - +0.0 1,334,881 - -0.9
Or see this region's nucleotide sequence