Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20922 and SM_b21395 are separated by 26 nucleotides SM_b21395 and SM_b21396 are separated by 55 nucleotides SM_b21396 and SM_b21397 are separated by 265 nucleotides
SM_b20921: SM_b20921 - hypothetical protein, at 1,327,536 to 1,327,778
_b20921
SM_b20922: SM_b20922 - hypothetical protein, at 1,327,663 to 1,328,715
_b20922
SM_b21395: SM_b21395 - hypothetical protein, at 1,328,742 to 1,329,278
_b21395
SM_b21396: SM_b21396 - hypothetical protein, at 1,329,334 to 1,329,780
_b21396
SM_b21397: SM_b21397 - hypothetical protein, at 1,330,046 to 1,330,282
_b21397
Position (kb)
1328
1329
1330 Strain fitness (log2 ratio)
-1
0
1 at 1327.900 kb on + strand, within SM_b20922 at 1327.901 kb on - strand, within SM_b20922 at 1327.901 kb on - strand, within SM_b20922 at 1328.016 kb on + strand, within SM_b20922 at 1328.016 kb on + strand, within SM_b20922 at 1328.017 kb on - strand, within SM_b20922 at 1328.211 kb on + strand, within SM_b20922 at 1328.212 kb on - strand, within SM_b20922 at 1328.438 kb on + strand, within SM_b20922 at 1328.438 kb on + strand, within SM_b20922 at 1328.439 kb on - strand, within SM_b20922 at 1328.439 kb on - strand, within SM_b20922 at 1328.549 kb on + strand, within SM_b20922 at 1328.597 kb on + strand, within SM_b20922 at 1328.597 kb on + strand, within SM_b20922 at 1328.597 kb on + strand, within SM_b20922 at 1328.648 kb on + strand at 1328.774 kb on - strand at 1328.774 kb on - strand at 1328.774 kb on - strand at 1328.946 kb on - strand, within SM_b21395 at 1329.065 kb on + strand, within SM_b21395 at 1329.289 kb on + strand at 1329.371 kb on + strand at 1329.371 kb on + strand at 1329.371 kb on + strand at 1329.371 kb on + strand at 1329.372 kb on - strand at 1329.524 kb on + strand, within SM_b21396 at 1329.524 kb on + strand, within SM_b21396 at 1329.525 kb on - strand, within SM_b21396 at 1329.543 kb on + strand, within SM_b21396 at 1329.544 kb on - strand, within SM_b21396 at 1329.544 kb on - strand, within SM_b21396 at 1329.544 kb on - strand, within SM_b21396 at 1329.631 kb on + strand, within SM_b21396 at 1329.632 kb on - strand, within SM_b21396 at 1329.632 kb on - strand, within SM_b21396 at 1329.703 kb on + strand, within SM_b21396 at 1329.960 kb on + strand at 1329.960 kb on + strand at 1329.960 kb on + strand at 1329.960 kb on + strand at 1329.960 kb on + strand at 1329.961 kb on - strand at 1329.961 kb on - strand at 1329.961 kb on - strand at 1329.961 kb on - strand at 1330.047 kb on + strand at 1330.048 kb on - strand at 1330.197 kb on + strand, within SM_b21397 at 1330.224 kb on + strand, within SM_b21397 at 1330.224 kb on + strand, within SM_b21397
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 1,327,900 + SM_b20922 0.23 -0.1 1,327,901 - SM_b20922 0.23 +0.2 1,327,901 - SM_b20922 0.23 -0.7 1,328,016 + SM_b20922 0.34 +0.2 1,328,016 + SM_b20922 0.34 +0.3 1,328,017 - SM_b20922 0.34 +0.2 1,328,211 + SM_b20922 0.52 -0.4 1,328,212 - SM_b20922 0.52 +0.5 1,328,438 + SM_b20922 0.74 +0.1 1,328,438 + SM_b20922 0.74 -0.1 1,328,439 - SM_b20922 0.74 -1.1 1,328,439 - SM_b20922 0.74 +0.1 1,328,549 + SM_b20922 0.84 +0.1 1,328,597 + SM_b20922 0.89 -0.1 1,328,597 + SM_b20922 0.89 -0.1 1,328,597 + SM_b20922 0.89 +0.3 1,328,648 + +0.4 1,328,774 - -1.1 1,328,774 - +0.0 1,328,774 - +0.2 1,328,946 - SM_b21395 0.38 -1.1 1,329,065 + SM_b21395 0.60 -0.7 1,329,289 + -0.3 1,329,371 + -0.2 1,329,371 + -0.0 1,329,371 + +0.3 1,329,371 + -0.2 1,329,372 - -0.5 1,329,524 + SM_b21396 0.43 -0.0 1,329,524 + SM_b21396 0.43 -0.2 1,329,525 - SM_b21396 0.43 -1.3 1,329,543 + SM_b21396 0.47 -0.1 1,329,544 - SM_b21396 0.47 +1.2 1,329,544 - SM_b21396 0.47 -0.3 1,329,544 - SM_b21396 0.47 +0.1 1,329,631 + SM_b21396 0.66 -0.5 1,329,632 - SM_b21396 0.67 +0.3 1,329,632 - SM_b21396 0.67 -0.3 1,329,703 + SM_b21396 0.83 -0.0 1,329,960 + +0.0 1,329,960 + -0.1 1,329,960 + +0.1 1,329,960 + -1.5 1,329,960 + -0.6 1,329,961 - +0.2 1,329,961 - +0.0 1,329,961 - +0.1 1,329,961 - -0.0 1,330,047 + +0.6 1,330,048 - +0.7 1,330,197 + SM_b21397 0.64 +0.0 1,330,224 + SM_b21397 0.75 +0.3 1,330,224 + SM_b21397 0.75 +0.0
Or see this region's nucleotide sequence