Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21062 and SM_b21063 are separated by 58 nucleotides SM_b21063 and SM_b21064 overlap by 4 nucleotides SM_b21064 and SM_b21065 are separated by 15 nucleotides
SM_b21062: SM_b21062 - NDP-hexose methyltransferase, at 695,813 to 697,012
_b21062
SM_b21063: SM_b21063 - nucleotide-binding protein, at 697,071 to 698,642
_b21063
SM_b21064: SM_b21064 - hypothetical protein, at 698,639 to 699,172
_b21064
SM_b21065: SM_b21065 - hypothetical protein, at 699,188 to 700,165
_b21065
Position (kb) 697
698
699 Strain fitness (log2 ratio) -2
-1
0
1
2 at 696.139 kb on + strand, within SM_b21062 at 696.139 kb on + strand, within SM_b21062 at 696.140 kb on - strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.361 kb on - strand, within SM_b21062 at 696.433 kb on - strand, within SM_b21062 at 696.437 kb on + strand, within SM_b21062 at 696.437 kb on + strand, within SM_b21062 at 696.461 kb on + strand, within SM_b21062 at 696.461 kb on + strand, within SM_b21062 at 696.497 kb on + strand, within SM_b21062 at 696.513 kb on - strand, within SM_b21062 at 696.596 kb on + strand, within SM_b21062 at 696.597 kb on - strand, within SM_b21062 at 696.845 kb on + strand, within SM_b21062 at 696.846 kb on - strand, within SM_b21062 at 696.948 kb on - strand at 696.948 kb on - strand at 697.171 kb on + strand at 697.172 kb on - strand at 697.172 kb on - strand at 697.188 kb on - strand at 697.188 kb on - strand at 697.199 kb on + strand at 697.232 kb on + strand, within SM_b21063 at 697.300 kb on - strand, within SM_b21063 at 697.420 kb on + strand, within SM_b21063 at 697.529 kb on + strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.554 kb on + strand, within SM_b21063 at 697.578 kb on - strand, within SM_b21063 at 697.719 kb on + strand, within SM_b21063 at 697.720 kb on - strand, within SM_b21063 at 697.722 kb on + strand, within SM_b21063 at 697.722 kb on + strand, within SM_b21063 at 697.755 kb on + strand, within SM_b21063 at 697.755 kb on + strand, within SM_b21063 at 697.756 kb on - strand, within SM_b21063 at 697.758 kb on + strand, within SM_b21063 at 697.851 kb on + strand, within SM_b21063 at 697.873 kb on + strand, within SM_b21063 at 697.918 kb on + strand, within SM_b21063 at 697.918 kb on + strand, within SM_b21063 at 697.919 kb on - strand, within SM_b21063 at 697.919 kb on - strand, within SM_b21063 at 698.156 kb on + strand, within SM_b21063 at 698.157 kb on - strand, within SM_b21063 at 698.340 kb on + strand, within SM_b21063 at 698.358 kb on + strand, within SM_b21063 at 698.359 kb on - strand, within SM_b21063 at 698.359 kb on - strand, within SM_b21063 at 698.411 kb on + strand, within SM_b21063 at 698.412 kb on - strand, within SM_b21063 at 698.412 kb on - strand at 698.425 kb on + strand, within SM_b21063 at 698.425 kb on + strand, within SM_b21063 at 698.714 kb on + strand, within SM_b21064 at 698.761 kb on + strand, within SM_b21064 at 698.761 kb on + strand, within SM_b21064 at 698.765 kb on - strand, within SM_b21064 at 698.817 kb on + strand, within SM_b21064 at 698.840 kb on + strand, within SM_b21064 at 698.840 kb on + strand, within SM_b21064 at 698.841 kb on - strand, within SM_b21064 at 698.858 kb on + strand, within SM_b21064 at 698.874 kb on - strand, within SM_b21064 at 698.874 kb on - strand, within SM_b21064 at 699.280 kb on + strand at 699.281 kb on - strand at 699.306 kb on + strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.351 kb on - strand, within SM_b21065 at 699.372 kb on + strand, within SM_b21065 at 699.373 kb on - strand, within SM_b21065 at 699.415 kb on - strand, within SM_b21065 at 699.586 kb on + strand, within SM_b21065 at 699.636 kb on - strand, within SM_b21065 at 699.636 kb on - strand, within SM_b21065
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 696,139 + SM_b21062 0.27 -0.0 696,139 + SM_b21062 0.27 +1.7 696,140 - SM_b21062 0.27 -0.6 696,143 + SM_b21062 0.28 -0.6 696,143 + SM_b21062 0.28 -0.0 696,143 + SM_b21062 0.28 -0.3 696,143 + SM_b21062 0.28 -0.1 696,143 + SM_b21062 0.28 -0.2 696,143 + SM_b21062 0.28 -0.4 696,143 + SM_b21062 0.28 +0.2 696,143 + SM_b21062 0.28 -0.1 696,144 - SM_b21062 0.28 -0.3 696,144 - SM_b21062 0.28 -0.3 696,144 - SM_b21062 0.28 +0.3 696,144 - SM_b21062 0.28 -0.7 696,144 - SM_b21062 0.28 -0.3 696,144 - SM_b21062 0.28 -0.4 696,144 - SM_b21062 0.28 -0.0 696,361 - SM_b21062 0.46 -0.6 696,433 - SM_b21062 0.52 -0.3 696,437 + SM_b21062 0.52 -0.0 696,437 + SM_b21062 0.52 +0.2 696,461 + SM_b21062 0.54 +1.1 696,461 + SM_b21062 0.54 -0.6 696,497 + SM_b21062 0.57 +0.1 696,513 - SM_b21062 0.58 +0.1 696,596 + SM_b21062 0.65 +0.2 696,597 - SM_b21062 0.65 +0.3 696,845 + SM_b21062 0.86 -0.2 696,846 - SM_b21062 0.86 -0.2 696,948 - +0.6 696,948 - +0.2 697,171 + +0.3 697,172 - -0.4 697,172 - +0.1 697,188 - +0.7 697,188 - +0.8 697,199 + -0.3 697,232 + SM_b21063 0.10 -1.3 697,300 - SM_b21063 0.15 -0.5 697,420 + SM_b21063 0.22 -0.1 697,529 + SM_b21063 0.29 -0.1 697,534 - SM_b21063 0.29 +0.6 697,534 - SM_b21063 0.29 +0.2 697,534 - SM_b21063 0.29 -0.5 697,554 + SM_b21063 0.31 -0.5 697,578 - SM_b21063 0.32 -0.0 697,719 + SM_b21063 0.41 +0.1 697,720 - SM_b21063 0.41 +0.2 697,722 + SM_b21063 0.41 -0.2 697,722 + SM_b21063 0.41 -0.7 697,755 + SM_b21063 0.44 +0.2 697,755 + SM_b21063 0.44 +0.0 697,756 - SM_b21063 0.44 -0.4 697,758 + SM_b21063 0.44 +0.7 697,851 + SM_b21063 0.50 -0.6 697,873 + SM_b21063 0.51 -0.8 697,918 + SM_b21063 0.54 -0.8 697,918 + SM_b21063 0.54 -0.9 697,919 - SM_b21063 0.54 -0.8 697,919 - SM_b21063 0.54 +0.0 698,156 + SM_b21063 0.69 +0.1 698,157 - SM_b21063 0.69 -0.8 698,340 + SM_b21063 0.81 +0.5 698,358 + SM_b21063 0.82 -0.5 698,359 - SM_b21063 0.82 +0.3 698,359 - SM_b21063 0.82 +0.2 698,411 + SM_b21063 0.85 +0.2 698,412 - SM_b21063 0.85 -0.7 698,412 - +0.5 698,425 + SM_b21063 0.86 -0.4 698,425 + SM_b21063 0.86 -2.2 698,714 + SM_b21064 0.14 -0.8 698,761 + SM_b21064 0.23 +1.0 698,761 + SM_b21064 0.23 -0.7 698,765 - SM_b21064 0.24 +0.3 698,817 + SM_b21064 0.33 +0.7 698,840 + SM_b21064 0.38 -0.2 698,840 + SM_b21064 0.38 +0.1 698,841 - SM_b21064 0.38 +0.0 698,858 + SM_b21064 0.41 +0.1 698,874 - SM_b21064 0.44 -0.5 698,874 - SM_b21064 0.44 -1.4 699,280 + +0.2 699,281 - -1.4 699,306 + SM_b21065 0.12 -0.3 699,307 - SM_b21065 0.12 -0.3 699,307 - SM_b21065 0.12 -0.3 699,307 - SM_b21065 0.12 -0.2 699,351 - SM_b21065 0.17 -0.4 699,372 + SM_b21065 0.19 +2.0 699,373 - SM_b21065 0.19 -0.6 699,415 - SM_b21065 0.23 -0.3 699,586 + SM_b21065 0.41 -0.4 699,636 - SM_b21065 0.46 +0.5 699,636 - SM_b21065 0.46 -0.0
Or see this region's nucleotide sequence