Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1163 and SMa1166 are separated by 114 nucleotides SMa1166 and SMa1168 are separated by 51 nucleotides SMa1168 and SMa1169 are separated by 83 nucleotides
SMa1163: SMa1163 - Cation transport P-type ATPase, at 637,388 to 639,787
SMa1163
SMa1166: SMa1166 - hydrolase, at 639,902 to 640,945
SMa1166
SMa1168: SMa1168 - Dehydrogenase, FAD-dependent, at 640,997 to 641,578
SMa1168
SMa1169: SMa1169 - hypothetical protein, at 641,662 to 642,003
SMa1169
Position (kb) 639
640
641 Strain fitness (log2 ratio) -1
0
1
2 at 639.191 kb on + strand, within SMa1163 at 639.191 kb on + strand, within SMa1163 at 639.191 kb on + strand, within SMa1163 at 639.192 kb on - strand, within SMa1163 at 639.192 kb on - strand, within SMa1163 at 639.193 kb on + strand, within SMa1163 at 639.193 kb on + strand, within SMa1163 at 639.292 kb on - strand, within SMa1163 at 639.423 kb on + strand, within SMa1163 at 639.423 kb on + strand, within SMa1163 at 639.424 kb on - strand, within SMa1163 at 639.424 kb on - strand, within SMa1163 at 639.431 kb on - strand, within SMa1163 at 639.548 kb on + strand at 639.820 kb on + strand at 639.874 kb on + strand at 639.933 kb on + strand at 639.933 kb on + strand at 639.934 kb on - strand at 639.934 kb on - strand at 639.947 kb on - strand at 639.986 kb on + strand at 640.067 kb on + strand, within SMa1166 at 640.630 kb on + strand, within SMa1166 at 640.630 kb on + strand, within SMa1166 at 640.740 kb on + strand, within SMa1166 at 640.952 kb on - strand at 641.075 kb on + strand, within SMa1168 at 641.119 kb on - strand, within SMa1168 at 641.324 kb on + strand, within SMa1168 at 641.324 kb on + strand, within SMa1168 at 641.559 kb on - strand at 641.875 kb on + strand, within SMa1169 at 641.875 kb on + strand, within SMa1169 at 641.875 kb on + strand, within SMa1169 at 641.875 kb on + strand, within SMa1169 at 641.875 kb on + strand, within SMa1169 at 641.928 kb on - strand, within SMa1169
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 639,191 + SMa1163 0.75 +1.7 639,191 + SMa1163 0.75 -0.8 639,191 + SMa1163 0.75 +0.3 639,192 - SMa1163 0.75 +0.6 639,192 - SMa1163 0.75 -0.1 639,193 + SMa1163 0.75 -1.2 639,193 + SMa1163 0.75 +2.4 639,292 - SMa1163 0.79 +0.0 639,423 + SMa1163 0.85 -0.2 639,423 + SMa1163 0.85 -0.1 639,424 - SMa1163 0.85 -0.1 639,424 - SMa1163 0.85 -0.1 639,431 - SMa1163 0.85 +0.1 639,548 + +0.3 639,820 + +0.2 639,874 + -0.5 639,933 + -0.2 639,933 + -0.2 639,934 - +1.1 639,934 - -1.0 639,947 - -0.7 639,986 + -0.1 640,067 + SMa1166 0.16 -0.2 640,630 + SMa1166 0.70 -1.0 640,630 + SMa1166 0.70 -1.2 640,740 + SMa1166 0.80 +0.1 640,952 - +0.0 641,075 + SMa1168 0.13 -0.1 641,119 - SMa1168 0.21 +0.0 641,324 + SMa1168 0.56 +0.5 641,324 + SMa1168 0.56 -0.4 641,559 - -0.6 641,875 + SMa1169 0.62 -0.3 641,875 + SMa1169 0.62 +0.3 641,875 + SMa1169 0.62 -0.2 641,875 + SMa1169 0.62 +0.2 641,875 + SMa1169 0.62 -0.3 641,928 - SMa1169 0.78 +0.3
Or see this region's nucleotide sequence