Experiment: R2A-HEPES control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20067 and SM_b20068 are separated by 214 nucleotides SM_b20068 and SM_b20069 are separated by 533 nucleotides SM_b20069 and SM_b20070 are separated by 260 nucleotides
SM_b20067: SM_b20067 - hypothetical protein, at 74,726 to 75,247
_b20067
SM_b20068: SM_b20068 - hypothetical protein, at 75,462 to 75,671
_b20068
SM_b20069: SM_b20069 - amino acid carrier protein, at 76,205 to 77,608
_b20069
SM_b20070: SM_b20070 - sulfate permease, at 77,869 to 79,356
_b20070
Position (kb) 76
77
78 Strain fitness (log2 ratio) -1
0
1 at 75.371 kb on + strand at 75.808 kb on + strand at 75.838 kb on + strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.924 kb on + strand at 75.924 kb on + strand at 75.940 kb on - strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.965 kb on - strand at 75.965 kb on - strand at 75.965 kb on - strand at 75.965 kb on - strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.969 kb on - strand at 75.969 kb on - strand at 75.998 kb on + strand at 75.998 kb on + strand at 75.999 kb on - strand at 75.999 kb on - strand at 75.999 kb on - strand at 76.228 kb on + strand at 76.228 kb on + strand at 76.338 kb on - strand at 76.338 kb on - strand at 76.338 kb on - strand at 76.397 kb on - strand, within SM_b20069 at 76.472 kb on - strand, within SM_b20069 at 76.558 kb on - strand, within SM_b20069 at 76.610 kb on - strand, within SM_b20069 at 76.723 kb on + strand, within SM_b20069 at 77.264 kb on + strand, within SM_b20069 at 77.271 kb on + strand, within SM_b20069 at 77.271 kb on + strand, within SM_b20069 at 77.271 kb on + strand, within SM_b20069 at 77.321 kb on + strand, within SM_b20069 at 77.321 kb on + strand, within SM_b20069 at 77.322 kb on - strand, within SM_b20069 at 77.325 kb on - strand, within SM_b20069 at 77.325 kb on - strand, within SM_b20069 at 77.531 kb on + strand at 77.607 kb on - strand at 77.665 kb on + strand at 77.679 kb on + strand at 77.679 kb on + strand at 77.684 kb on - strand at 77.684 kb on - strand at 77.684 kb on - strand at 77.816 kb on - strand at 77.931 kb on + strand at 77.932 kb on - strand at 77.932 kb on - strand at 77.987 kb on + strand at 77.991 kb on + strand at 77.992 kb on - strand at 77.992 kb on - strand at 77.992 kb on - strand at 78.143 kb on + strand, within SM_b20070 at 78.143 kb on + strand, within SM_b20070 at 78.143 kb on + strand, within SM_b20070 at 78.144 kb on - strand, within SM_b20070
Per-strain Table
Position Strand Gene LocusTag Fraction R2A-HEPES control for volatile experiments remove 75,371 + -0.0 75,808 + -0.7 75,838 + +0.3 75,839 - +1.5 75,839 - -0.5 75,839 - +0.8 75,839 - +0.1 75,839 - -0.1 75,839 - +0.4 75,839 - -0.5 75,924 + +0.2 75,924 + -1.3 75,940 - -0.0 75,964 + -0.0 75,964 + +1.7 75,964 + +0.4 75,964 + +0.3 75,964 + +0.8 75,964 + -0.1 75,964 + -0.1 75,965 - -0.5 75,965 - -0.4 75,965 - +0.2 75,965 - +0.3 75,968 + +0.8 75,968 + +0.6 75,968 + -0.5 75,968 + -0.7 75,968 + -0.2 75,969 - -0.9 75,969 - -0.4 75,998 + +0.5 75,998 + -0.6 75,999 - +0.7 75,999 - -0.3 75,999 - -0.2 76,228 + +0.3 76,228 + -0.9 76,338 - -0.6 76,338 - -0.1 76,338 - -0.1 76,397 - SM_b20069 0.14 -0.2 76,472 - SM_b20069 0.19 -0.5 76,558 - SM_b20069 0.25 -1.2 76,610 - SM_b20069 0.29 -0.4 76,723 + SM_b20069 0.37 -0.7 77,264 + SM_b20069 0.75 -1.2 77,271 + SM_b20069 0.76 +0.2 77,271 + SM_b20069 0.76 -0.4 77,271 + SM_b20069 0.76 -1.0 77,321 + SM_b20069 0.79 -0.8 77,321 + SM_b20069 0.79 -0.4 77,322 - SM_b20069 0.80 -0.4 77,325 - SM_b20069 0.80 -0.4 77,325 - SM_b20069 0.80 -0.3 77,531 + +0.8 77,607 - -0.2 77,665 + +0.4 77,679 + -0.3 77,679 + -0.1 77,684 - -0.3 77,684 - -0.1 77,684 - -0.1 77,816 - +1.7 77,931 + -1.3 77,932 - -0.1 77,932 - +0.2 77,987 + +0.4 77,991 + -0.8 77,992 - +1.3 77,992 - -0.2 77,992 - -0.3 78,143 + SM_b20070 0.18 +0.9 78,143 + SM_b20070 0.18 -0.1 78,143 + SM_b20070 0.18 +0.8 78,144 - SM_b20070 0.18 +0.5
Or see this region's nucleotide sequence