Experiment: R2A control for volatile experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1797 and SMa1798 are separated by 615 nucleotides
SMa1797: SMa1797 - hypothetical protein, at 1,018,587 to 1,018,913
SMa1797
SMa1798: SMa1798 - Kup2 potassium uptake protein, at 1,019,529 to 1,021,430
SMa1798
Position (kb)
1018
1019 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1017.891 kb on + strand at 1017.961 kb on + strand at 1017.962 kb on - strand at 1017.962 kb on - strand at 1017.963 kb on + strand at 1017.964 kb on - strand at 1017.964 kb on - strand at 1018.004 kb on - strand at 1018.024 kb on + strand at 1018.025 kb on - strand at 1018.025 kb on - strand at 1018.027 kb on + strand at 1018.249 kb on - strand at 1018.345 kb on + strand at 1018.345 kb on + strand at 1018.346 kb on - strand at 1018.346 kb on - strand at 1018.376 kb on + strand at 1018.436 kb on + strand at 1018.448 kb on - strand at 1018.473 kb on + strand at 1018.473 kb on + strand at 1018.474 kb on - strand at 1018.585 kb on - strand at 1018.620 kb on + strand, within SMa1797 at 1018.620 kb on + strand, within SMa1797 at 1018.640 kb on + strand, within SMa1797 at 1018.641 kb on - strand, within SMa1797 at 1018.641 kb on - strand, within SMa1797 at 1018.643 kb on + strand, within SMa1797 at 1018.753 kb on + strand, within SMa1797 at 1018.754 kb on - strand, within SMa1797 at 1018.841 kb on + strand, within SMa1797 at 1018.841 kb on + strand, within SMa1797 at 1018.925 kb on + strand at 1018.925 kb on + strand at 1019.131 kb on - strand at 1019.169 kb on - strand at 1019.190 kb on + strand at 1019.190 kb on + strand at 1019.190 kb on + strand at 1019.191 kb on - strand at 1019.214 kb on + strand at 1019.214 kb on + strand at 1019.214 kb on + strand at 1019.215 kb on - strand at 1019.215 kb on - strand at 1019.382 kb on - strand at 1019.405 kb on - strand at 1019.414 kb on + strand at 1019.528 kb on + strand at 1019.528 kb on + strand at 1019.529 kb on - strand at 1019.529 kb on - strand at 1019.616 kb on + strand at 1019.757 kb on + strand, within SMa1798
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control for volatile experiments remove 1,017,891 + -0.3 1,017,961 + +4.3 1,017,962 - +0.9 1,017,962 - +0.0 1,017,963 + -0.3 1,017,964 - +0.9 1,017,964 - -1.0 1,018,004 - +0.3 1,018,024 + +1.5 1,018,025 - -1.3 1,018,025 - -0.1 1,018,027 + +0.1 1,018,249 - +0.5 1,018,345 + +0.2 1,018,345 + -0.9 1,018,346 - +0.4 1,018,346 - +0.2 1,018,376 + +0.2 1,018,436 + -0.0 1,018,448 - -1.3 1,018,473 + -0.0 1,018,473 + +0.1 1,018,474 - +1.0 1,018,585 - -1.1 1,018,620 + SMa1797 0.10 +0.3 1,018,620 + SMa1797 0.10 -0.3 1,018,640 + SMa1797 0.16 +0.1 1,018,641 - SMa1797 0.17 -0.5 1,018,641 - SMa1797 0.17 +1.0 1,018,643 + SMa1797 0.17 +0.3 1,018,753 + SMa1797 0.51 +3.1 1,018,754 - SMa1797 0.51 -1.0 1,018,841 + SMa1797 0.78 -0.3 1,018,841 + SMa1797 0.78 +2.3 1,018,925 + -1.8 1,018,925 + -1.0 1,019,131 - -0.0 1,019,169 - -0.1 1,019,190 + -0.7 1,019,190 + +0.7 1,019,190 + -1.1 1,019,191 - +0.4 1,019,214 + -0.6 1,019,214 + -0.5 1,019,214 + +0.8 1,019,215 - -1.2 1,019,215 - -0.1 1,019,382 - -0.6 1,019,405 - +0.0 1,019,414 + -0.6 1,019,528 + -0.0 1,019,528 + +0.4 1,019,529 - +0.9 1,019,529 - +0.8 1,019,616 + +0.1 1,019,757 + SMa1798 0.12 -0.8
Or see this region's nucleotide sequence