Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVUA0103

Experiment: MoYLS4 media with ammonia

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 media with ammonia
138,855	-				-0.1
138,855	-				-1.0
139,039	+	escT	DVUA0102	0.14	+0.9
139,049	-	escT	DVUA0102	0.15	-0.0
139,066	+	escT	DVUA0102	0.17	+0.6
139,081	-	escT	DVUA0102	0.19	+0.5
139,234	+	escT	DVUA0102	0.38	-0.9
139,234	+	escT	DVUA0102	0.38	-0.7
139,258	+	escT	DVUA0102	0.41	+0.0
139,258	+	escT	DVUA0102	0.41	+0.3
139,258	+	escT	DVUA0102	0.41	-0.7
139,258	+	escT	DVUA0102	0.41	+0.1
139,258	+	escT	DVUA0102	0.41	+1.9
139,258	+	escT	DVUA0102	0.41	-0.0
139,258	+	escT	DVUA0102	0.41	-0.1
139,258	+	escT	DVUA0102	0.41	+0.9
139,266	-	escT	DVUA0102	0.42	+0.3
139,266	-	escT	DVUA0102	0.42	-0.1
139,266	-	escT	DVUA0102	0.42	-0.1
139,266	-	escT	DVUA0102	0.42	+0.9
139,266	-	escT	DVUA0102	0.42	+0.9
139,266	-	escT	DVUA0102	0.42	+0.4
139,276	-	escT	DVUA0102	0.43	+0.1
139,365	-	escT	DVUA0102	0.54	+0.9
139,374	-	escT	DVUA0102	0.55	-0.2
139,415	+	escT	DVUA0102	0.60	+0.9
139,433	-	escT	DVUA0102	0.62	+0.3
139,467	-	escT	DVUA0102	0.67	+0.1
139,483	+	escT	DVUA0102	0.69	-0.4
139,639	-	escT	DVUA0102	0.88	-1.4
139,683	-				+0.0
139,699	-				-0.2
139,699	-				+0.5
139,801	-	invX	DVUA0103	0.21	-0.4
139,848	-	invX	DVUA0103	0.39	-0.1
139,855	-	invX	DVUA0103	0.42	-0.5
139,860	+	invX	DVUA0103	0.44	+0.0
139,895	+	invX	DVUA0103	0.57	-2.2
139,895	+	invX	DVUA0103	0.57	-0.4
139,895	+	invX	DVUA0103	0.57	-1.0
139,895	+	invX	DVUA0103	0.57	+0.9
139,895	+	invX	DVUA0103	0.57	-1.3
139,903	-	invX	DVUA0103	0.60	-0.4
139,903	-	invX	DVUA0103	0.60	-0.3
139,905	+	invX	DVUA0103	0.61	-0.5
140,073	-				-0.2
140,168	-				-0.1
140,213	+				+1.3
140,224	+				+0.2
140,244	+				-0.7
140,269	+				+0.1
140,270	-				-0.7
140,333	+				-0.3
140,409	-				-0.1
140,413	+				+0.2
140,446	-				+0.3
140,589	-	sctV	DVUA0104	0.12	-0.1
140,605	-	sctV	DVUA0104	0.13	-0.6
140,641	-	sctV	DVUA0104	0.15	-0.4
140,648	+	sctV	DVUA0104	0.15	+2.3
140,693	-	sctV	DVUA0104	0.17	-0.3
140,697	+	sctV	DVUA0104	0.18	+3.5
140,697	+	sctV	DVUA0104	0.18	+2.5
140,707	-	sctV	DVUA0104	0.18	-0.2
140,864	+	sctV	DVUA0104	0.26	+0.9
140,864	+	sctV	DVUA0104	0.26	-0.1
140,917	-	sctV	DVUA0104	0.28	-0.1
140,944	-	sctV	DVUA0104	0.29	+0.9
140,978	-	sctV	DVUA0104	0.31	+1.9