Experiment: MoYLS4 media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0037 and b0983 overlap by 1 nucleotides b0983 and DVUA0039 are separated by 0 nucleotides
DVUA0037: DVUA0037 - sugar transferase domain protein (TIGR), at 44,190 to 45,644
DVUA0037
DVUA0038: b0983 - capsular polysaccharide transport protein (TIGR), at 45,644 to 46,450
b0983
DVUA0039: DVUA0039 - chain length determinant family protein (TIGR), at 46,451 to 47,953
DVUA0039
Position (kb) 45
46
47 Strain fitness (log2 ratio) -1
0
1
2
3 at 44.650 kb on - strand, within DVUA0037 at 44.673 kb on + strand, within DVUA0037 at 44.673 kb on + strand, within DVUA0037 at 44.676 kb on - strand, within DVUA0037 at 44.707 kb on + strand, within DVUA0037 at 44.715 kb on - strand, within DVUA0037 at 44.849 kb on + strand, within DVUA0037 at 44.865 kb on + strand, within DVUA0037 at 44.872 kb on + strand, within DVUA0037 at 44.882 kb on - strand, within DVUA0037 at 44.895 kb on + strand, within DVUA0037 at 44.944 kb on + strand, within DVUA0037 at 44.946 kb on + strand, within DVUA0037 at 44.978 kb on - strand, within DVUA0037 at 45.012 kb on + strand, within DVUA0037 at 45.133 kb on - strand, within DVUA0037 at 45.169 kb on + strand, within DVUA0037 at 45.177 kb on - strand, within DVUA0037 at 45.221 kb on - strand, within DVUA0037 at 45.222 kb on - strand, within DVUA0037 at 45.232 kb on - strand, within DVUA0037 at 45.238 kb on - strand, within DVUA0037 at 45.265 kb on - strand, within DVUA0037 at 45.423 kb on + strand, within DVUA0037 at 45.704 kb on - strand at 45.804 kb on + strand, within b0983 at 45.812 kb on - strand, within b0983 at 45.842 kb on + strand, within b0983 at 45.842 kb on + strand, within b0983 at 45.850 kb on - strand, within b0983 at 45.859 kb on + strand, within b0983 at 45.860 kb on + strand, within b0983 at 45.901 kb on - strand, within b0983 at 45.960 kb on + strand, within b0983 at 46.093 kb on - strand, within b0983 at 46.227 kb on + strand, within b0983 at 46.234 kb on - strand, within b0983 at 46.243 kb on + strand, within b0983 at 46.245 kb on + strand, within b0983 at 46.250 kb on + strand, within b0983 at 46.267 kb on + strand, within b0983 at 46.280 kb on + strand, within b0983 at 46.345 kb on + strand, within b0983 at 46.574 kb on - strand at 46.577 kb on + strand at 46.587 kb on + strand at 46.632 kb on + strand, within DVUA0039 at 46.669 kb on + strand, within DVUA0039 at 46.677 kb on - strand, within DVUA0039 at 46.716 kb on + strand, within DVUA0039 at 46.724 kb on - strand, within DVUA0039 at 46.732 kb on - strand, within DVUA0039 at 46.732 kb on - strand, within DVUA0039 at 46.732 kb on - strand, within DVUA0039 at 46.740 kb on + strand, within DVUA0039 at 46.809 kb on - strand, within DVUA0039 at 46.855 kb on + strand, within DVUA0039 at 46.855 kb on + strand, within DVUA0039 at 46.948 kb on + strand, within DVUA0039 at 46.956 kb on - strand, within DVUA0039 at 47.034 kb on - strand, within DVUA0039 at 47.134 kb on - strand, within DVUA0039 at 47.251 kb on + strand, within DVUA0039 at 47.391 kb on + strand, within DVUA0039
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media remove 44,650 - DVUA0037 0.32 -0.0 44,673 + DVUA0037 0.33 +2.0 44,673 + DVUA0037 0.33 +0.1 44,676 - DVUA0037 0.33 +0.0 44,707 + DVUA0037 0.36 -0.5 44,715 - DVUA0037 0.36 -0.4 44,849 + DVUA0037 0.45 -0.4 44,865 + DVUA0037 0.46 -0.6 44,872 + DVUA0037 0.47 -1.0 44,882 - DVUA0037 0.48 -1.0 44,895 + DVUA0037 0.48 +0.7 44,944 + DVUA0037 0.52 -0.5 44,946 + DVUA0037 0.52 +3.0 44,978 - DVUA0037 0.54 +0.4 45,012 + DVUA0037 0.56 +0.0 45,133 - DVUA0037 0.65 -0.4 45,169 + DVUA0037 0.67 -1.0 45,177 - DVUA0037 0.68 +0.4 45,221 - DVUA0037 0.71 -1.0 45,222 - DVUA0037 0.71 -0.3 45,232 - DVUA0037 0.72 -0.8 45,238 - DVUA0037 0.72 -0.6 45,265 - DVUA0037 0.74 +2.0 45,423 + DVUA0037 0.85 -0.6 45,704 - -0.0 45,804 + b0983 DVUA0038 0.20 -0.3 45,812 - b0983 DVUA0038 0.21 +2.3 45,842 + b0983 DVUA0038 0.25 -0.2 45,842 + b0983 DVUA0038 0.25 -1.2 45,850 - b0983 DVUA0038 0.26 +1.4 45,859 + b0983 DVUA0038 0.27 -0.3 45,860 + b0983 DVUA0038 0.27 -0.1 45,901 - b0983 DVUA0038 0.32 -0.4 45,960 + b0983 DVUA0038 0.39 +0.5 46,093 - b0983 DVUA0038 0.56 -0.6 46,227 + b0983 DVUA0038 0.72 -0.6 46,234 - b0983 DVUA0038 0.73 +2.0 46,243 + b0983 DVUA0038 0.74 +2.0 46,245 + b0983 DVUA0038 0.74 -1.2 46,250 + b0983 DVUA0038 0.75 +0.3 46,267 + b0983 DVUA0038 0.77 -0.4 46,280 + b0983 DVUA0038 0.79 +0.3 46,345 + b0983 DVUA0038 0.87 -0.3 46,574 - -0.2 46,577 + -0.8 46,587 + -0.2 46,632 + DVUA0039 0.12 -0.8 46,669 + DVUA0039 0.15 +0.2 46,677 - DVUA0039 0.15 -0.4 46,716 + DVUA0039 0.18 +0.3 46,724 - DVUA0039 0.18 +0.0 46,732 - DVUA0039 0.19 -0.3 46,732 - DVUA0039 0.19 +0.2 46,732 - DVUA0039 0.19 -0.8 46,740 + DVUA0039 0.19 +0.7 46,809 - DVUA0039 0.24 +0.4 46,855 + DVUA0039 0.27 -0.4 46,855 + DVUA0039 0.27 +2.6 46,948 + DVUA0039 0.33 -0.7 46,956 - DVUA0039 0.34 -0.2 47,034 - DVUA0039 0.39 +1.0 47,134 - DVUA0039 0.45 -0.3 47,251 + DVUA0039 0.53 -0.1 47,391 + DVUA0039 0.63 +2.0
Or see this region's nucleotide sequence